Dobrava-Belgrade orthohantavirus

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Dobrava-Belgrade orthohantavirus
Virus classification OOjs UI icon edit-ltr.svg
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Negarnaviricota
Class: Ellioviricetes
Order: Bunyavirales
Family: Hantaviridae
Genus: Orthohantavirus
Species:
Dobrava-Belgrade orthohantavirus
Member viruses [1]
Synonyms [2]
  • Dobrava-Belgrade hantavirus
  • Dobrava-Belgrade virus

Dobrava-Belgrade orthohantavirus (DOBV), also known as Dobrava virus, is an enveloped, single-stranded, negative-sense RNA virus species of Old World Orthohantavirus . It is one of several species of Hantavirus that is the causative agent of severe Hantavirus hemorrhagic fever with renal syndrome. It was first isolated in 1985 from a yellow-necked mouse (Apodemus flavicollis) found in the village of Dobrava, southeastern Slovenia. [3] [4] It was subsequently isolated in striped field mice in Russia and other parts of Eastern Europe. It has also been found in Germany but the reservoir host there is unknown. [5]

Contents

Phylogeny

Four genotypes are described: [6]

Disease

Clinical presentation varies between the four genotypes. Dobrava is the most virulent, with a case-fatality rate (CFR) of 10 to 12%, followed by Sochi, which has a CFR greater than 6%, then Kurkino, which has a CFR 0.3% to 0.9%, and lastly Saaremaa, which seems to mainly be subclinical as illness has not been reported despite a relatively high rate of seropositivity. [6]

Natural reservoir

The four genotypes each have their own natural reservoir: [6]

See also

Related Research Articles

<i>Orthohantavirus</i> Genus of viruses

Orthohantavirus is a genus of single-stranded, enveloped, negative-sense RNA viruses in the family Hantaviridae within the order Bunyavirales. Members of this genus may be called orthohantaviruses or simply hantaviruses.

<span class="mw-page-title-main">Yellow-necked mouse</span> Species of mammal

The yellow-necked mouse, also called yellow-necked field mouse, yellow-necked wood mouse, and South China field mouse, is closely related to the wood mouse, with which it was long confused. It was only recognised as a separate species in 1894. It differs in its band of yellow fur around the neck and in having slightly larger ears and usually being slightly larger overall. Around 100 mm in length, it can climb trees and sometimes overwinters in houses. It is found mostly in mountainous areas of southern Europe, but extends north into parts of Scandinavia and Britain. It facilitates the spread of tick-borne encephalitis to humans and is a reservoir species for the Dobrava virus, a hantavirus that is responsible for causing haemorrhagic fever with renal syndrome.

New York orthohantavirus or New York virus is an Orthohantavirus. It is considered a strain of Sin Nombre orthohantavirus. It was first isolated from a white-footed mouse caught on an island off New York. The virus is associated with typical hantavirus pulmonary syndrome.

Black Creek Canal orthohantavirus (BCCV) is a single-stranded, negative sense RNA virus species of New World Orthohantavirus. It was first isolated in cotton rats found in the Black Creek Canal area of Dade County, Florida in 1995. The discovery followed from an isolated case of Hantavirus pulmonary syndrome diagnosed in a Dade County resident.

Amur virus (AMRV) is a zoonotic negative-sense single-stranded RNA virus. It may be a member of the genus Orthohantavirus, but it has not be definitively classified as a species and may only be a strain. It has been identified as a causative agent of hemorrhagic fever with renal syndrome.

Sangassou orthohantavirus(SANGV) is single-stranded, negative-sense RNA virus species of the genus Orthohantavirus in the Bunyavirales order. It was first isolated in an African wood mouse (Hylomyscus simus) in the forest in Guinea, West Africa in 2010. It is named for the village near where the mouse was trapped. It is the first indigenous Murinae-associated African hantavirus to be discovered.

<span class="mw-page-title-main">Hantavirus hemorrhagic fever with renal syndrome</span> Group of clinically similar illnesses caused by species of hantaviruses

Hantavirus hemorrhagic fever with renal syndrome (HFRS) is a group of clinically similar illnesses caused by species of hantaviruses. It is also known as Korean hemorrhagic fever and epidemic hemorrhagic fever. It is found in Europe, Asia, and Africa. The species that cause HFRS include Hantaan orthohantavirus, Dobrava-Belgrade orthohantavirus, Saaremaa virus, Seoul orthohantavirus, Puumala orthohantavirus and other orthohantaviruses. Of these species, Hantaan River virus and Dobrava-Belgrade virus cause the most severe form of the syndrome and have the highest morbidity rates. When caused by the Puumala virus, it is also called nephropathia epidemica. This infection is known as sorkfeber in Swedish, myyräkuume in Finnish, and musepest in Norwegian.

<span class="mw-page-title-main">Hantavirus pulmonary syndrome</span> Viral pulmonary disease of humans

Hantavirus pulmonary syndrome (HPS) is one of two potentially fatal syndromes of zoonotic origin caused by species of hantavirus. These include Black Creek Canal virus (BCCV), New York orthohantavirus (NYV), Monongahela virus (MGLV), Sin Nombre orthohantavirus (SNV), and certain other members of hantavirus genera that are native to the United States and Canada.

Saaremaa virus is a single-stranded, negative-sense, RNA virus Orthohantavirus that causes a milder form of Hantavirus hemorrhagic fever with renal syndrome. It is a member virus of Dobrava-Belgrade orthohantavirus. It was first isolated from a striped field mouse in Slovakia.

Soochong virus (SOOV) is a zoonotic negative sense single-stranded RNA virus. It may be a member of the genus Orthohantavirus, but it has not be definitively classified as a species and may only be a strain. It is one of four rodent-borne Hantaviruses found in the Republic of Korea. It is the etiologic agent for Hantavirus hemorrhagic fever with renal syndrome (HFRS). The other species responsible for HFRS in Korea are Seoul virus, Haantan virus, and Muju virus.

Muju virus(MUV) is a zoonotic negative-sense single-stranded RNA virus of the genus Orthohantavirus. It is a member virus of Puumala orthohantavirus. It is one of four rodent-borne Hantaviruses found in the Republic of Korea. It is the etiologic agent for Hantavirus hemorrhagic fever with renal syndrome (HFRS). The other species responsible for HFRS in Korea are Seoul orthohantavirus, Hantaan orthohantavirus, and Soochong virus.

Magboi virus (MGBV) is a novel, bat-borne Orthohantavirus discovered in a slit-faced bat trapped near the Magboi Stream in eastern Sierra Leone in 2011. It is a single-stranded, negative sense, RNA virus in the Bunyavirales order.

Tula orthohantavirus, formerly Tula virus (TULV), is a single-stranded, negative-sense RNA virus species of orthohantavirus first isolated from a European common vole found in Central Russia. It causes Hantavirus hemorrhagic fever with renal syndrome. The Microtus species are also found in North America, Europe, Scandinavia, Slovenia, Asia, and Western Russia. Human cases of Tula orthohantavirus have also been reported in Switzerland and Germany.

Limestone Canyon virus (LSC) is a single-stranded, negative-sense RNA zoonotic Orthohantavirus that is genetically similar to Sin Nombre orthohantavirus which causes Hantavirus pulmonary syndrome (HPS) in humans. HPS causing hantaviruses are found only in the United States and South America.

Hantaan orthohantavirus (HTNV) is an enveloped, single-stranded, negative-sense RNA virus species of Old World Orthohantavirus. It is the causative agent of Korean hemorrhagic fever in humans. It is named for the Hantan River in South Korea, and in turn lends the name to its genus Orthohantavirus and family Hantaviridae.

Tanganya virus(TGNV) is an enveloped, single-stranded, negative-sense RNA virus, possibly of the genus orthohantavirus in the Bunyavirales order. It is the second indigenous Murinae-associated African hantavirus to be discovered. It has a low sequence similarity to other hantaviruses and serologically distinct from other hantaviruses. Its host is Crocidura theresae.

Thottopalayam thottimvirus, formerly Thottapalayam virus, (TMPV) is single-stranded, enveloped, negative-sense RNA virus species of the genus Thottimvirus in the Bunyavirales order. It is the first hantavirus to be isolated from a shrew. It was discovered in India in 1964.

Imjin thottimvirus(MJNV) is a single-stranded, enveloped, negative-sense RNA virus of the orthohantavirus genus in the Bunyavirales order. It is a newly identified hantavirus isolated from the lung tissues of Ussuri white-toothed shrews of the species Crocidura lasiura (order Soricomorpha, family Soricidae, subfamily Crocidurinae) captured near the demilitarized zone in the Republic of Korea during 2004 and 2005.

Thailand virus (THAIV) is a single-stranded, enveloped, negative-sense RNA orthohantavirus.

Hantavirus vaccine is a vaccine that protects in humans against hantavirus infections causing hantavirus hemorrhagic fever with renal syndrome (HFRS) or hantavirus pulmonary syndrome (HPS). The vaccine is considered important as acute hantavirus infections are responsible for significant morbidity and mortality worldwide. It is estimated that about 1.5 million cases and 46,000 deaths occurred in China from 1950 to 2007. The number of cases is estimated at 32,000 in Finland from 2005 to 2010 and 90,000 in Russia from 1996 to 2006.

References

  1. Briese, Thomas (July 18, 2016). "In the genus Hantavirus (proposed family Hanta viridae, proposed order Bunyavirales), created 24 new species, abolished 7 species, changed the demarcation criteria, and change the name of the genus to Orthohantavirus; likewise, rename its constituent species" (PDF). International Committee on Taxonomy of Viruses (ICTV). Retrieved 30 January 2019.
  2. "ICTV Taxonomy history: Dobrava-Belgrade orthohantavirus". International Committee on Taxonomy of Viruses (ICTV). Retrieved 30 January 2019.
  3. Avsic-Zupanc T, Xiao SY, Stojanovic R, Gligic A, van der Groen G, LeDuc JW (Oct 1992). "Characterization of Dobrava virus: a Hantavirus from Slovenia, Yugoslavia". J Med Virol. 38 (2): 132–7. doi:10.1002/jmv.1890380211. PMID   1360999. S2CID   30221111.
  4. Likar, Miha (1995). "Mišja mrzlica in virus Dobrava v Sloveniji" [Hemorrhagic Fever and the Dobrava Virus in Slovenia](PDF). UJMA (in Slovenian) (11): 155–160. Archived from the original (PDF) on 2021-06-24. Retrieved 2021-06-21.
  5. Schlegel Mathias; Klempa Boris; Auste Brita; Bemmann Margrit; Schmidt-Chanasit Jonas; Büchner Thomas; Groschup Martin H.; Meier Markus; Balkema-Buschmann Anne; Zoller Hinrich; Krüger Detlev H.; Ulrich Rainer G. (2009). "Dobrava-Belgrade Virus Spillover Infections, Germany". Emerging Infectious Diseases. 15 (12): 2017–20. doi:10.3201/eid1512.090923. PMC   3044545 . PMID   19961690.
  6. 1 2 3 Klempa B, Avsic-Zupanc T, Clement J, Dzagurova TK, Henttonen H, Heyman P, Jakab F, Kruger DH, Maes P, Papa A, Tkachenko EA, Ulrich RG, Vapalahti O, Vaheri A (2013). "Complex evolution and epidemiology of Dobrava-Belgrade hantavirus: definition of genotypes and their characteristics". Arch Virol. 158 (3): 521–529. doi:10.1007/s00705-012-1514-5. PMC   3586401 . PMID   23090188.