Partial cloning

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Relationship between fully differentiated "old" cells, pluripotent stem cells produced through classical cloning, and "young" cells produced by partial cloning. Partial cloning.jpeg
Relationship between fully differentiated "old" cells, pluripotent stem cells produced through classical cloning, and "young" cells produced by partial cloning.

In the field of cell biology, the method of partial cloning (PCL) converts a fully differentiated old somatic cell into a partially reprogrammedyoung cell that retains all the specialised functions of the differentiated old cell but is simply younger. [1] The method of PCL reverses characteristics associated with old cells. For example, old, senescent, cells rejuvenated by PCL are free of highly condensed senescence-associated heterochromatin foci (SAHF) and re-acquire the proliferation potential of young cells. [2] The method of PCL thus rejuvenates old cells without de-differentiation and passage through an embryonic, pluripotent, stage.

Contents

Method

PCL consists in introducing a somatic adult or senescent cell nucleus or entire cell with enlarged membrane pores in an (activated) oocyte and to withdraw this treated cell before its de-differentiation and first cell division occurs. Thus, the progressive rejuvenation capability of the oocyte is used only temporarily in order to obtain a partial natural rejuvenation. PCL permits to envisage a chosen degree of partial rejuvenation in changing the duration of the introduction of the treated cell in the oocyte. Using PCL cell de-differentiation and its age reprogramming might be, at least partially, separable. Thus the existence of an isolated ageing clock would be confirmed at least during a certain part of the cellular evolution and involution.

Application

First experimental result shows a possible high efficiency in partial rejuvenation of senescent mouse cells. Notably PCL rejuvenates exclusively one single tissue or organ, in contrast to classical cloning PCL is therefore unable to reconstitute an entire organism. Furthermore, PCL is feasible in a few hours in opposition to classical cloning or induced pluripotent stem cells (iPS) which all need weeks or months.

Classical cloning can rejuvenate old cells but the process demands that the old cells must artificially pass through an embryonic cell stage. Partial cloning affords the advantage that the old cells to be rejuvenated do not have to pass through the embryonic cell stage and are simply made younger.

The extension of human lifespan, in terms of useful, quality, years added to life, has been a goal for many since time immemorial. And while a goal whose attainment was thought improbable, or at least achievable only in the far distant future, the discovery that animals can be cloned has brought the goal of rejuvenation much closer. The remarkable discovery that animals can be cloned showed that the nucleus of an old cell can be used as a donor in so-called “nuclear transfer” experiments where an old nucleus is transferred into a recipient egg whose own nuclear material has been removed. The “reconstructed” egg is then prompted to engage development and develops through an embryonic stage that results, once the embryo is implanted into a surrogate mother, into a new born. Thus an old cell can give rise to a newborn, which has a typical lifespan: the age of the donor cell is “wiped clean” and returned to a youthful state. Notably, in classical animal cloning the rejuvenation process involves a return to an embryonic form. Thus the specialized functions of the adult cell are also “wiped clean” and returned to an embryonic cell type. And in classical cloning passage through this embryonic state is a must for the age of the cell to be “wiped clean”.

The key notion that exemplifies “partial” cloning from “classical” cloning is the separation of the mechanism(s) that “wipe clean” the specialization of a cell from those that “wipe-clean” the age of the cell. In short, partial cloning aims to retain the specialized functions of a cell and simply make it younger, e.g., a skin cell is rejuvenated without having to pass through the embryonic stage that is a must for rejuvenation via the classical cloning technique (see diagram).

In a new laboratory at the Forschungszentrum Borstel our work on partial cloning focuses, inter alia, on the restricted, temporary, incubation of an “old” cell within the egg. In this way only the age of the cell is “wiped clean” and its specialized, differentiated, state is retained. It is simply made younger – rejuvenated - without going through the embryonic state. The measure of Diagram showing the difference between “Classical” and “Partial” cloning: Classical cloning (the route given by the black arrows) can rejuvenate an old cell but requires passage through an embryonic stage. “Partial cloning” (given by the red arrow) rejuvenates old cells without passage through an embryonic stage.“Partial cloning” (given by the red arrow) rejuvenates old cells without passage through an embryonic stage. In a new laboratory at the Forschungszentrum Borstel our work on partial cloning focuses, inter alia, on the restricted, temporary, incubation of an “old” cell within the egg. In this way only the age of the cell is “wiped clean” and its specialized, differentiated, state is retained. It is simply made younger – rejuvenated - without going through the embryonic state. The measure of rejuvenation in our system is, first, the re-acquisition of the ability of an old cell to divide, something that is lost in old cells and, second, the loss of characteristics that are associated with old cells.

Should such rejuvenation be achievable the consequences for medicine would be profound. It would avoid the need to artificially pass through an embryonic stage – either by nuclear transfer or by the so-called iPS cells method - to rejuvenate cells. One would simply be able to take aged cells from a patient and then return to the patient their own, histocompatible, rejuvenated heart cells, liver cells etc. In sharp contrast to the cycle of artificial de-differentiation of somatic cells to stem cells and then the artificial re-differentiation of stem cells to the desired differentiated cell type, which is highly inefficient, time-consuming and results in unstable cell types. The process of partial cloning would be efficient and rapid and thus cheap both in terms of materials and manpower. In short, partial cloning has enormous potential to relieve human suffering and disease: it is the most rapid and cheap route to successful regenerative medicine. Partial cloning also avoids the ethical problems associated with “classical” cloning in that it does not result in live born – it mere uses the oocyte briefly as a means to condition and thereby rejuvenate the old cell exclusively.

Related Research Articles

Dolly (sheep) First cloned mammal (1996–2003)

Dolly was a female Finnish Dorset sheep and the first mammal cloned from an adult somatic cell. She was cloned by associates of the Roslin Institute in Scotland, using the process of nuclear transfer from a cell taken from a mammary gland. Her cloning proved that a cloned organism could be produced from a mature cell from a specific body part. Contrary to popular belief, she was not the first animal to be cloned.

Human cloning Creation of a genetically identical copy of a human

Human cloning is the creation of a genetically identical copy of a human. The term is generally used to refer to artificial human cloning, which is the reproduction of human cells and tissue. It does not refer to the natural conception and delivery of identical twins. The possibility of human cloning has raised controversies. These ethical concerns have prompted several nations to pass laws regarding human cloning.

Stem cell Undifferentiated biological cells that can differentiate into specialized cells

In multicellular organisms, stem cells are undifferentiated or partially differentiated cells that can differentiate into various types of cells and proliferate indefinitely to produce more of the same stem cell. They are the earliest type of cell in a cell lineage. They are found in both embryonic and adult organisms, but they have slightly different properties in each. They are usually distinguished from progenitor cells, which cannot divide indefinitely, and precursor or blast cells, which are usually committed to differentiating into one cell type.

Transdifferentiation, also known as lineage reprogramming, is an artificial process in which one mature somatic cell is transformed into another mature somatic cell without undergoing an intermediate pluripotent state or progenitor cell type. It is a type of metaplasia, which includes all cell fate switches, including the interconversion of stem cells. Current uses of transdifferentiation include disease modeling and drug discovery and in the future may include gene therapy and regenerative medicine. The term 'transdifferentiation' was originally coined by Selman and Kafatos in 1974 to describe a change in cell properties as cuticle producing cells became salt-secreting cells in silk moths undergoing metamorphosis.

Cellular differentiation Process in which totipotent cells acquire specialized features

Cellular differentiation is the process in which a stem cell alters from one type to a differentiated one Usually, the cell changes to a more specialized type. Differentiation happens multiple times during the development of a multicellular organism as it changes from a simple zygote to a complex system of tissues and cell types. Differentiation continues in adulthood as adult stem cells divide and create fully differentiated daughter cells during tissue repair and during normal cell turnover. Some differentiation occurs in response to antigen exposure. Differentiation dramatically changes a cell's size, shape, membrane potential, metabolic activity, and responsiveness to signals. These changes are largely due to highly controlled modifications in gene expression and are the study of epigenetics. With a few exceptions, cellular differentiation almost never involves a change in the DNA sequence itself. Although metabolic composition does get altered quite dramatically where stem cells are characterized by abundant metabolites with highly unsaturated structures whose levels decrease upon differentiation. Thus, different cells can have very different physical characteristics despite having the same genome.

Somatic cell nuclear transfer Method of creating a cloned embryo by replacing the egg nucleus with a body cell nucleus

In genetics and developmental biology, somatic cell nuclear transfer (SCNT) is a laboratory strategy for creating a viable embryo from a body cell and an egg cell. The technique consists of taking an enucleated oocyte and implanting a donor nucleus from a somatic (body) cell. It is used in both therapeutic and reproductive cloning. In 1996, Dolly the sheep became famous for being the first successful case of the reproductive cloning of a mammal. In January 2018, a team of scientists in Shanghai announced the successful cloning of two female crab-eating macaques from foetal nuclei.

Germ cell Gamete-producing cell

A germ cell is any biological cell that gives rise to the gametes of an organism that reproduces sexually. In many animals, the germ cells originate in the primitive streak and migrate via the gut of an embryo to the developing gonads. There, they undergo meiosis, followed by cellular differentiation into mature gametes, either eggs or sperm. Unlike animals, plants do not have germ cells designated in early development. Instead, germ cells can arise from somatic cells in the adult, such as the floral meristem of flowering plants.

Embryonic stem cell Pluripotent stem cell of the inner cell mass of the blastocyst

Embryonic stem cells are pluripotent stem cells derived from the inner cell mass of a blastocyst, an early-stage pre-implantation embryo. Human embryos reach the blastocyst stage 4–5 days post fertilization, at which time they consist of 50–150 cells. Isolating the embryoblast, or inner cell mass (ICM) results in destruction of the blastocyst, a process which raises ethical issues, including whether or not embryos at the pre-implantation stage have the same moral considerations as embryos in the post-implantation stage of development.

John Gurdon English developmental biologist (born 1933)

Sir John Bertrand Gurdon is a British developmental biologist. He is best known for his pioneering research in nuclear transplantation and cloning. He was awarded the Lasker Award in 2009. In 2012, he and Shinya Yamanaka were awarded the Nobel Prize for Physiology or Medicine for the discovery that mature cells can be converted to stem cells.

Oct-4 Mammalian protein found in Homo sapiens

Oct-4, also known as POU5F1, is a protein that in humans is encoded by the POU5F1 gene. Oct-4 is a homeodomain transcription factor of the POU family. It is critically involved in the self-renewal of undifferentiated embryonic stem cells. As such, it is frequently used as a marker for undifferentiated cells. Oct-4 expression must be closely regulated; too much or too little will cause differentiation of the cells.

Nuclear transfer Form of cloning

Nuclear transfer is a form of cloning. The steps involve removing the DNA from an oocyte, and injecting the nucleus which contains the DNA to be cloned. In rare instances, the newly constructed cell will divide normally, replicating the new DNA while remaining in a pluripotent state. If the cloned cells are placed in the uterus of a female mammal, a cloned organism develops to term in rare instances. This is how Dolly the Sheep and many other species were cloned. Cows are commonly cloned to select those that have the best milk production. On 24 January 2018, two monkey clones were reported to have been created with the technique for the first time.

In biology, reprogramming refers to erasure and remodeling of epigenetic marks, such as DNA methylation, during mammalian development or in cell culture. Such control is also often associated with alternative covalent modifications of histones.

The stem cell controversy is the consideration of the ethics of research involving the development and use of human embryos. Most commonly, this controversy focuses on embryonic stem cells. Not all stem cell research involves human embryos. For example, adult stem cells, amniotic stem cells, and induced pluripotent stem cells do not involve creating, using, or destroying human embryos, and thus are minimally, if at all, controversial. Many less controversial sources of acquiring stem cells include using cells from the umbilical cord, breast milk, and bone marrow, which are not pluripotent.

Induced pluripotent stem cell Pluripotent stem cell generated directly from a somatic cell

Induced pluripotent stem cells are a type of pluripotent stem cell that can be generated directly from a somatic cell. The iPSC technology was pioneered by Shinya Yamanaka’s lab in Kyoto, Japan, who showed in 2006 that the introduction of four specific genes, collectively known as Yamanaka factors, encoding transcription factors could convert somatic cells into pluripotent stem cells. He was awarded the 2012 Nobel Prize along with Sir John Gurdon "for the discovery that mature cells can be reprogrammed to become pluripotent."

Shinya Yamanaka Japanese stem cell researcher

Shinya Yamanaka is a Japanese stem cell researcher, winner of the Nobel Prize. He serves as the director of Center for iPS Cell Research and Application and a professor at the Institute for Frontier Medical Sciences at Kyoto University; as a senior investigator at the UCSF-affiliated Gladstone Institutes in San Francisco, California; and as a professor of anatomy at University of California, San Francisco (UCSF). Yamanaka is also a past president of the International Society for Stem Cell Research (ISSCR).

Embryomics is the identification, characterization and study of the diverse cell types which arise during embryogenesis, especially as this relates to the location and developmental history of cells in the embryo. Cell type may be determined according to several criteria: location in the developing embryo, gene expression as indicated by protein and nucleic acid markers and surface antigens, and also position on the embryogenic tree.

Cell potency Ability of a cell to differentiate into other cell types

Cell potency is a cell's ability to differentiate into other cell types. The more cell types a cell can differentiate into, the greater its potency. Potency is also described as the gene activation potential within a cell, which like a continuum, begins with totipotency to designate a cell with the most differentiation potential, pluripotency, multipotency, oligopotency, and finally unipotency.

Embryonic stem cells are capable of self-renewing and differentiating to the desired fate depending on their position in the body. Stem cell homeostasis is maintained through epigenetic mechanisms that are highly dynamic in regulating the chromatin structure as well as specific gene transcription programs. Epigenetics has been used to refer to changes in gene expression, which are heritable through modifications not affecting the DNA sequence.

Induced stem cells (iSC) are stem cells derived from somatic, reproductive, pluripotent or other cell types by deliberate epigenetic reprogramming. They are classified as either totipotent (iTC), pluripotent (iPSC) or progenitor or unipotent – (iUSC) according to their developmental potential and degree of dedifferentiation. Progenitors are obtained by so-called direct reprogramming or directed differentiation and are also called induced somatic stem cells.

GLIS1

Glis1 is gene encoding a Krüppel-like protein of the same name whose locus is found on Chromosome 1p32.3. The gene is enriched in unfertilised eggs and embryos at the one cell stage and it can be used to promote direct reprogramming of somatic cells to induced pluripotent stem cells, also known as iPS cells. Glis1 is a highly promiscuous transcription factor, regulating the expression of numerous genes, either positively or negatively. In organisms, Glis1 does not appear to have any directly important functions. Mice whose Glis1 gene has been removed have no noticeable change to their phenotype.

References

  1. Singh PB, Zacouto F (June 2010). "Nuclear reprogramming and epigenetic rejuvenation" (PDF). J. Biosci. 35 (2): 315–9. doi:10.1007/s12038-010-0034-2. PMID   20689186. S2CID   13222825.
  2. Adams PD (August 2007). "Remodeling of chromatin structure in senescent cells and its potential impact on tumor suppression and aging". Gene. 397 (1–2): 84–93. doi:10.1016/j.gene.2007.04.020. PMC   2755200 . PMID   17544228.

Further reading