Acutolysin A

Last updated
Acutolysin-A
1BUD Acutolysin A.png
Acutolysin A structure (rainbow colored, N-terminus blue, C-terminus red) [1]
Identifiers
Organism Deinagkistrodon acutus
Symbol?
PDB 1BUD
UniProt Q9PW35
Search for
Structures Swiss-model
Domains InterPro

Acutolysin A (also called AaH I) is a toxin found in the snake Agkistrodon acutus venom. It is a member of the adamalysin subfamily of the metzincin family and is a snake venom zinc metalloproteinase possessing only one catalytic domain. AaH I grows crystals under pH 5.0 and 7.5 conditions. AaH I has a single polypeptide chain and a molecular weight of 22 kDa. [2]

Contents

Structure

The overall fold of Acutolysin A is composed of a twisted β-sheet core flanked by α-helices, forming the characteristic metzincin architecture. Central to this fold is the conserved Met-turn, a methionine-containing structural motif that stabilizes the active-site configuration. The three disulfide bonds in AaH I (Cys117–Cys197, Cys159–Cys181, and Cys157–Cys164) are strategically positioned to maintain this fold under physiological conditions and to resist thermal or proteolytic degradation. These disulfide linkages play a crucial role in preserving the shape of the catalytic cleft, ensuring maximal enzymatic activity even in harsh extracellular environments. At the active site is the HELGHNLGLH metalloproteinase motif, which binds a catalytic zinc ion in a tetrahedral geometry. Three histidine residues coordinate the zinc atom, while the fourth ligand is either a water molecule or hydroxide ion, which acts as the nucleophile in peptide bond hydrolysis. The active-site cleft forms a deep groove that accommodates collagen and laminin fibers, aligning them precisely for cleavage. This structural arrangement explains the exceptional potency of AaH I in degrading basement membranes. [3]

Agkistrodon acutus Venom

Common names for this snake include sharp nosed viper, hundred pacer, and snorkel viper. [4] [5] This snake is a pit viper found in the mountains of South Asia. [4] [6] This snake is extremely venomous having a reputation where people can only walk one hundred steps before dying. [4] [7] It is not uncommon for fatalities after being bitten. [6] [8] Bite symptoms include severe local pain and bleeding that may begin almost immediately. [8] [6] This is followed by considerable swelling, blistering, necrosis, and ulceration. [8] [6] Systemic symptoms, which often include heart palpitations, may occur suddenly and relatively soon after the bite. [6] This venom causes people to be forced to amputate limbs and well as mesangiolysis. [8] [5] [9] Mesangiolysis is the process which affects the glomerular mesangium without causing obvious damage to the capillary basement membranes. [9] It is the degeneration and killing of the cells that line the inner layer of the glomerulus, which regulates the globular filtration in the kidney. [9] This causes the kidney to be unable to function, resulting in death. [9] After just two hours when the venom is injected into mice, it causes the mice to start mesangiolysis till their kidneys eventually stop working and they die. [5] This venom contains various anticoagulant and hemorrhagic proteins that interfere with the coagulation process. [10] [5] [4] There are four haemorrhagins (acutolysin A, acutolysin B, acutolysin C, and acutolysin D) with acutolysin A being the most portent haemorrhagic. [11] [5] There is a venom yield of up to 214 mg (dried) and [Median lethal dose|LD50] values of 0.04 mg/kg IV, 4.0 mg/kg IP and 9.2–10.0 mg/kg SC. [5] [4] [7]

Agkistrodon acutus. Chinese Moccasin pit viper snake. Deinagkistrodon acutus 295892035.jpg
Agkistrodon acutus. Chinese Moccasin pit viper snake.

Acutolysin A

AaH I is a hemorrhagic toxin which means it causes internal bleeding by damaging blood vessels. AaH I damages the walls of capillaries, causes them to leak blood internally, leading to death. Herrorrhagic toxins are common among other snake venoms as well like rattlesnakes and the western diamondback. There are 5 different types of AaH in Agkistrodon acutus venom, with AaH I being the strongest herrorrhagic one. Its proteolytic activity was sensitive to pH where it was 100 times stronger in weak alkaline conditions at pH 7.5. This is referring to the break down of proteins through the enzyme proteases. Aah I has three disulfide connections at Cys117-Cys197, Cys159-Cys181 and Cys157-Cys164. There is also one calcium ion, zinc ion, and three histidine zinc ligation in the structure. Each member of the metzincins has a zinc ion in its active site. Metzincins family is metalloproteinases that use a zinc ion in the enzymatic reaction. The zinc binding in AaH I is tetrahedral, three imidazole nitrogen atoms of histidine and one oxygen atom. It is unknown whether this oxygen atom is a water molecule or a hydroxide ion. A calcium ion occurs on the surface of the AaH I molecule opposite to the active-site cleft and close to the crossover point of the N-terminal and the C-terminal segment. Its position close to the C terminus, this calcium ion in the multi-domain parent structure could well play an important role in stabilizing and tightening the segment connecting the proteolytic domain with the succeeding disintegrin domain.

AaH I exerts its hemorrhagic and tissue-destructive effects primarily through its function as a zinc-dependent metalloproteinase specialized for degrading structural components of the extracellular matrix. The toxin targets the basement membrane of capillaries, which is composed largely of collagen type IV, laminin, nidogen, and heparan sulfate proteoglycans. These proteins form a scaffold that maintains capillary integrity. AaH I cleaves these ECM proteins with high efficiency, and because the toxin shows optimal activity near physiological pH, it functions extremely effectively in blood and tissue microenvironment. The active site of AaH I contains the conserved metalloproteinase motif HELGHNLGLH, where three histidine residues coordinate a catalytic zinc ion. The zinc ion polarizes a bound water molecule, allowing it to act as a potent nucleophile that attacks peptide bonds in substrate proteins. This hydrolytic attack directly destroys the structural proteins that hold endothelial cells in place, leading to rapid disruption of capillary walls. Within minutes of exposure, endothelial cells detach from their underlying basement membrane, causing vascular leakage, red blood cell extravasation, and local hemorrhage.

In addition to basement membrane breakdown, AaH I induces endothelial cell apoptosis. This is not due to direct cytotoxicity but is a secondary effect of losing the cell’s structural anchoring to the ECM, a process known as anoikis. Once endothelial cells detach, capillaries become fragile and prone to rupture under normal blood pressure. This effect explains the extremely rapid onset of local bleeding seen in victims of Agkistrodon acutus bites. AaH I also indirectly enhances hemorrhage by interfering with platelet aggregation, because ECM fragments generated by proteolysis prevent platelets from binding properly to the injury site. This prolongs bleeding and contributes to systemic effects such as hypotension and organ ischemia. When the toxin reaches the kidneys, its proteolytic activity contributes to mesangiolysis, where the supporting mesangial cells of the glomerulus detach and die, ultimately leading to renal failure.

Venom Comparison

Each snake that has venom contains various haemorrhagins that cause the hemorrhage and damage of living tissues. Majority of snake venoms contain the zinc metalloproteinase like AaH I. These zinc metallproteinase have similar active sites to matrix metallproteimase which are responsible for degrading proteins of the extracellular matrix. Snake venom metallproteinase are able to work on collagen in connective tissues. Which means they are apart of the MMP super-family and help design drugs for anti-tumor and anti-arthritis. Because of this, they are great for learning more about the mechanisms of ligand-receptor interaction and cell-cell interaction. The agkistrodon acutus venom in particular contains a protein called ACTX-6 which can induce apoptosis. Apoptosis is forced cell death through morphological changes that lead to death. There are multiple ways that cells naturally die this way. Agkistrodon acutus venom can induce this cell death in cancer cells through the Fas pathway activation. Fas is a receptor for death in cells that when turned on will cause a caspase cascade. Which is a pathway made up of series of proteins called initiator and executioner caspases. Where initiator caspases help form apoptosis initiation factor that eventually activates executioner caspases. Executioner caspases procedure to eat the cell from the inside out by cleaving cytoskeleton filaments and DNA until the cell implodes.

References

  1. Gong W, Zhu X, Liu S, Teng M, Niu L (October 1998). "Crystal structures of acutolysin A, a three-disulfide hemorrhagic zinc metalloproteinase from the snake venom of Agkistrodon acutus". Journal of Molecular Biology. 283 (3): 657–668. doi:10.1006/jmbi.1998.2110. PMID   9784374.
  2. "Acutolysin A", Handbook of Proteolytic Enzymes, Academic Press, pp. 1059–1060, 2025-01-01, retrieved 2025-12-04
  3. Markland FS, Swenson S (February 2013). "Snake venom metalloproteinases". Toxicon : Official Journal of the International Society on Toxinology. 62: 3–18. doi:10.1016/j.toxicon.2012.09.004. PMID   23000249.
  4. 1 2 3 4 5 Chen PC, Huang MN, Chang JF, Liu CC, Chen CK, Hsieh CH (January 2019). "Snake venom proteome and immuno-profiling of the hundred-pace viper, Deinagkistrodon acutus, in Taiwan". Acta Tropica. 189: 137–144. doi:10.1016/j.actatropica.2018.09.017. PMID   30268686.
  5. 1 2 3 4 5 6 Huang J, Zhao M, Xue C, Liang J, Huang F (March 2022). "Analysis of the Composition of Deinagkistrodon acutus Snake Venom Based on Proteomics, and Its Antithrombotic Activity and Toxicity Studies". Molecules (Basel, Switzerland). 27 (7): 2229. doi: 10.3390/molecules27072229 . PMC   9000436 . PMID   35408629.
  6. 1 2 3 4 5 Hu S, Bao S, Shen Y, Tu M (September 2024). "The Epidemiology and Clinical Features of Deinagkistrodon acutus Envenomation: A Retrospective Study from a Medical Center in Hangzhou, Southeast China". The American Journal of Tropical Medicine and Hygiene. 111 (3): 676–681. doi:10.4269/ajtmh.23-0680. PMC   11376154 . PMID   38955198.
  7. 1 2 Brown JH (1973). Toxicology and pharmacology of venoms from poisonous snakes. Springfield, IL: Charles C Thomas.
  8. 1 2 3 4 Cheng CL, Mao YC, Liu PY, Chiang LC, Liao SC, Yang CC (2017). "Deinagkistrodon acutus envenomation: a report of three cases". The Journal of Venomous Animals and Toxins Including Tropical Diseases. 23 20. doi: 10.1186/s40409-017-0111-1 . PMC   5364662 . PMID   28344596.
  9. 1 2 3 4 Rim CH (February 2018). "Development of quantitative index evaluating anticancer or carcinogenic potential of diet: the anti-cancer food scoring system 1.0". Nutrition Research and Practice. 12 (1): 52–60. doi:10.4162/nrp.2018.12.1.52. PMC   5792257 . PMID   29399297.
  10. Román-Domínguez L, Neri-Castro E, Vázquez López H, García-Osorio B, Archundia IG, Ortiz-Medina JA, Petricevich VL, Alagón A, Bénard-Valle M (October 2019). "Biochemical and immunochemical characterization of venoms from snakes of the genus Agkistrodon". Toxicon: X. 4 100013. Bibcode:2019TxcnX...400013R. doi:10.1016/j.toxcx.2019.100013. PMC   7285990 . PMID   32550570.
  11. Zhu X, Teng M, Niu L (November 1999). "Structure of acutolysin-C, a haemorrhagic toxin from the venom of Agkistrodon acutus, providing further evidence for the mechanism of the pH-dependent proteolytic reaction of zinc metalloproteinases". Acta Crystallographica. Section D, Biological Crystallography. 55 (Pt 11): 1834–41. Bibcode:1999AcCrD..55.1834Z. doi:10.1107/s0907444999010306. PMID   10531480.