Cindy Lee is a retired Distinguished Professor known for her research characterizing the compounds that comprise marine organic matter.
Lee has a B.S. in chemistry and B.S.E. in chemical engineering from Arizona State University (1970) and a Ph.D. from University of California San Diego, Scripps Institution of Oceanography (1975). [1] Following her Ph.D., Lee became a postdoc at Woods Hole Oceanographic Institution in 1975 which transitioned into positions as an assistant scientist (1977–1981) and associate scientist (1981–1986). In 1987, Lee moved to SUNY Stony Brook where she remained until her retirement as a distinguished professor in 2016. [1]
Lee's first published paper was as an undergraduate [2] which she described as the "...thrill of discovering something new". [1] As a graduate student at Scripps Institution of Oceanography, Lee examined the abundance of dissolved amino acids in seawater. [3] [4] Following graduate school, Lee moved to Woods Hole Oceanographic Institution where she first worked on sterols in marine sediments. [5] [6] [7] In the early 1980s Lee began an extended collaboration with John Hedges, Stuart Wakeham and Michael Peterson which she described in a 2019 publication in Annual Reviews of Marine Science. [1] This collaboration led to investigations into organic compounds found in particles sinking or suspended in the water column, and included developing new methods to capture particles [8] and investigations into the preservation of organic matter. [9] [10]
In the 1990s, Lee joined researchers in the Joint Global Ocean Flux Study (JGOFS) in the Equatorial Pacific where she used information on the composition of compounds captured in sediment traps to estimate the degradation of organic material [11] and its susceptibility to biological degradation. [12] Lee also worked on the JGOFS Arabian Sea project where she examined the flux of organic carbon with changes in the Southwest Monsoon. [13] Lee later joined with modelers to estimate fluxes of particulate organic carbon and the resulting implications to the global carbon cycle. [14]
In 2019, Lee authored two papers that reflect back on her career and provide a path forward and questions for future scientists. In Annual Reviews of Marine Science, Lee focused on considerations regarding sampling organic matter and her observations regarding the state of graduate education in marine science. [1] In Marine Chemistry, Wakeham and Lee summarized past research in marine organic biochemistry while providing a set of open research questions for future scientists to address. [15]
The biological pump (or ocean carbon biological pump or marine biological carbon pump) is the ocean's biologically driven sequestration of carbon from the atmosphere and land runoff to the ocean interior and seafloor sediments. In other words, it is a biologically mediated process which results in the sequestering of carbon in the deep ocean away from the atmosphere and the land. The biological pump is the biological component of the "marine carbon pump" which contains both a physical and biological component. It is the part of the broader oceanic carbon cycle responsible for the cycling of organic matter formed mainly by phytoplankton during photosynthesis (soft-tissue pump), as well as the cycling of calcium carbonate (CaCO3) formed into shells by certain organisms such as plankton and mollusks (carbonate pump).
The bathypelagic zone or bathyal zone is the part of the open ocean that extends from a depth of 1,000 to 4,000 m below the ocean surface. It lies between the mesopelagic above and the abyssopelagic below. The bathypelagic is also known as the midnight zone because of the lack of sunlight; this feature does not allow for photosynthesis-driven primary production, preventing growth of phytoplankton or aquatic plants. Although larger by volume than the photic zone, human knowledge of the bathypelagic zone remains limited by ability to explore the deep ocean.
A carbon-to-nitrogen ratio is a ratio of the mass of carbon to the mass of nitrogen in organic residues. It can, amongst other things, be used in analysing sediments and soil including soil organic matter and soil amendments such as compost.
Colored dissolved organic matter (CDOM) is the optically measurable component of dissolved organic matter in water. Also known as chromophoric dissolved organic matter, yellow substance, and gelbstoff, CDOM occurs naturally in aquatic environments and is a complex mixture of many hundreds to thousands of individual, unique organic matter molecules, which are primarily leached from decaying detritus and organic matter. CDOM most strongly absorbs short wavelength light ranging from blue to ultraviolet, whereas pure water absorbs longer wavelength red light. Therefore, water with little or no CDOM, such as the open ocean, appears blue. Waters containing high amounts of CDOM can range from brown, as in many rivers, to yellow and yellow-brown in coastal waters. In general, CDOM concentrations are much higher in fresh waters and estuaries than in the open ocean, though concentrations are highly variable, as is the estimated contribution of CDOM to the total dissolved organic matter pool.
In the deep ocean, marine snow is a continuous shower of mostly organic detritus falling from the upper layers of the water column. It is a significant means of exporting energy from the light-rich photic zone to the aphotic zone below, which is referred to as the biological pump. Export production is the amount of organic matter produced in the ocean by primary production that is not recycled (remineralised) before it sinks into the aphotic zone. Because of the role of export production in the ocean's biological pump, it is typically measured in units of carbon. The term was coined by explorer William Beebe as observed from his bathysphere. As the origin of marine snow lies in activities within the productive photic zone, the prevalence of marine snow changes with seasonal fluctuations in photosynthetic activity and ocean currents. Marine snow can be an important food source for organisms living in the aphotic zone, particularly for organisms that live very deep in the water column.
The benthic boundary layer (BBL) is the layer of water directly above the sediment at the bottom of a body of water. Through specific sedimentation processes, certain organisms are able to live in this deep layer of water. The BBL is generated by the friction of the water moving over the surface of the substrate, which decrease the water current significantly in this layer. The thickness of this zone is determined by many factors, including the Coriolis force. The benthic organisms and processes in this boundary layer echo the water column above them.
The oceanic carbon cycle is composed of processes that exchange carbon between various pools within the ocean as well as between the atmosphere, Earth interior, and the seafloor. The carbon cycle is a result of many interacting forces across multiple time and space scales that circulates carbon around the planet, ensuring that carbon is available globally. The Oceanic carbon cycle is a central process to the global carbon cycle and contains both inorganic carbon and organic carbon. Part of the marine carbon cycle transforms carbon between non-living and living matter.
Alice Alldredge is an American oceanographer and marine biologist who studies marine snow, carbon cycling, microbes and plankton in the ecology of the ocean. She has been one of the most cited scientific researchers since 2003.
Particulate organic matter (POM) is a fraction of total organic matter operationally defined as that which does not pass through a filter pore size that typically ranges in size from 0.053 millimeters (53 μm) to 2 millimeters.
Karen Frances Wishner is an American oceanographer currently at University of Rhode Island and an elected fellow of the American Association for the Advancement of Science. Her interests include coastal shelf and zooplankton behavior and environment, and has published her findings.
The Joint Global Ocean Flux Study (JGOFS) was an international research programme on the fluxes of carbon between the atmosphere and ocean, and within the ocean interior. Initiated by the Scientific Committee on Oceanic Research (SCOR), the programme ran from 1987 through to 2003, and became one of the early core projects of the International Geosphere-Biosphere Programme (IGBP).
Lycopane (C40H82; 2,6,10,14,19,23,27,31-octamethyldotriacontane), a 40 carbon alkane isoprenoid, is a widely present biomarker that is often found in anoxic settings. It has been identified in anoxically deposited lacustrine sediments (such as the Messel formation and the Condor oil shale deposit). It has been found in sulfidic and anoxic hypersaline environments (such as the Sdom Formation). It has been widely identified in modern marine sediments, including the Peru upwelling zone, the Black Sea, and the Cariaco Trench. It has been found only rarely in crude oils.
Particulate inorganic carbon (PIC) can be contrasted with dissolved inorganic carbon (DIC), the other form of inorganic carbon found in the ocean. These distinctions are important in chemical oceanography. Particulate inorganic carbon is sometimes called suspended inorganic carbon. In operational terms, it is defined as the inorganic carbon in particulate form that is too large to pass through the filter used to separate dissolved inorganic carbon.
Mary Jane Perry is an American oceanographer known for the use of optics to study marine phytoplankton.
The Martin curve is a power law used by oceanographers to describe the export to the ocean floor of particulate organic carbon (POC). The curve is controlled with two parameters: the reference depth in the water column, and a remineralisation parameter which is a measure of the rate at which the vertical flux of POC attenuates. It is named after the American oceanographer John Martin.
Zanna Chase is an ocean-going professor of chemical oceanography and paleoceanography at the Institute of Marine and Antarctic Science, University of Tasmania, Australia. She has undertaken over 20 voyages on research vessels, and her areas of expertise are Antarctic paleoclimate, marine carbon cycle, radionuclides in the ocean, sediment geochemistry, paleoceanography, and marine biogeochemistry. In 2013 she was awarded an ARC Future Fellowship.
Hilairy Ellen Hartnett is professor at Arizona State University known for her work on biogeochemical processes in modern and paleo-environments.
Elizabeth A. Canuel is a chemical oceanographer known for her work on organic carbon cycling in aquatic environments. She is the Chancellor Professor of Marine Science at the College of William & Mary and is an elected fellow of the Geochemical Society and the European Association of Geochemistry.
Kendra Lee Daly is an oceanographer known for her work on zooplankton, particularly in low oxygen regions of the ocean. She is a professor at the University of South Florida, and an elected fellow of the American Association for the Advancement of Science.
Maureen Hatcher Conte is biogeochemist known for her work using particles to define the long-term cycling of chemical compounds in seawater.