Critical Assessment of Genome Interpretation

Last updated
Overview of CAGI Competition CAGI Overview.webp
Overview of CAGI Competition

The Critical Assessment of Genome Interpretation (CAGI) is an annual bioinformatics competition focused on interpretation of genome variation. [1] CAGI experiments are modeled on the protocols developed in the Critical Assessment of Structure Prediction (CASP) program, adapted to the genomics domain. Over a period of a decade CAGI has conducted five rounds of challenges, attracting 738 submissions from around the world. [2] The results of which have been published in the journal Human Mutation. [3]

References

  1. ↑ "Collaboration through competition". Nature Methods (editorial). 11 (7): 695. July 2014. doi: 10.1038/nmeth.3026 . PMID   25110777.
  2. ↑ Jain, Shantanu; Bakolitsa, Constantina; Brenner, Steven E.; Radivojac, Predrag; Moult, John; Repo, Susanna; Hoskins, Roger A.; Andreoletti, Gaia; Barsky, Daniel; Chellapan, Ajithavalli; Chu, Hoyin; Dabbiru, Navya; Kollipara, Naveen K.; Ly, Melissa; Neumann, Andrew J. (2024-02-22). "CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods". Genome Biology. 25 (1): 53. doi: 10.1186/s13059-023-03113-6 . ISSN   1474-760X. PMC   10882881 . PMID   38389099.
  3. ↑ Andreoletti, Gaia; Pal, Lipika R.; Moult, John; Brenner, Steven E. (2019). "Reports from the fifth edition of CAGI: The Critical Assessment of Genome Interpretation". Human Mutation. 40 (9): 1197–1201. doi:10.1002/humu.23876. ISSN   1098-1004. PMC   7329230 . PMID   31334884.
This page is based on this Wikipedia article
Text is available under the CC BY-SA 4.0 license; additional terms may apply.
Images, videos and audio are available under their respective licenses.