Domine Database

Last updated
DOMINE
Database.png
Content
Descriptioncomprehensive collection of known and predicted domain-domain interactions.
Contact
Research center National Institute of Environmental Health Sciences, National Institutes of Health
LaboratorySystems Biology
Primary citationYellaboina et al. (2011) [1]
Release date2010
Access
Website https://manticore.niehs.nih.gov/domine

DOMINE is a database of known and predicted protein domain interactions (or domain-domain interactions). [1] It contains interactions observed in PDB crystal structures, and those predicted by several computational approaches. DOMINE uses Pfam HMM profiles for protein domain definitions. The DOMINE database contains 26,219 interactions among 5,410 domains), which includes 6,634 known interactions inferred from PDB structure data.

References

  1. 1 2 Yellaboina; et al. (Jan 2011). "DOMINE: a comprehensive collection of known and predicted domain-domain interactions". Nucleic Acids Res. 39 (Database issue). England: D730-5. doi:10.1093/nar/gkq1229. PMC   3013741 . PMID   21113022.

See also