| Aeromonadales | |
|---|---|
 | |
| Aeromonas hydrophila | |
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Pseudomonadota |
| Class: | Gammaproteobacteria |
| Order: | Aeromonadales Martin-Carnahan and Joseph, 2005 |
| Families | |
The Aeromonadales are an order of Pseudomonadota, with 10 genera in two families. [1] The species are anaerobic. [2] The cells are rod-shaped. Some species of this order are motile by a single polar flagellum; others are not motile.
The Chlorophyceae are one of the classes of green algae, distinguished mainly on the basis of ultrastructural morphology. They are usually green due to the dominance of pigments chlorophyll a and chlorophyll b. The chloroplast may be discoid, plate-like, reticulate, cup-shaped, spiral- or ribbon-shaped in different species. Most of the members have one or more storage bodies called pyrenoids located in the chloroplast. Pyrenoids contain protein besides starch. Some green algae may store food in the form of oil droplets. They usually have a cell wall made up of an inner layer of cellulose and outer layer of pectose.
A gamete is a haploid cell that fuses with another haploid cell during fertilization in organisms that reproduce sexually. Gametes are an organism's reproductive cells, also referred to as sex cells. The name gamete was introduced by the German cytologist Eduard Strasburger.
A spermatozoon is a motile sperm cell, or moving form of the haploid cell that is the male gamete. A spermatozoon joins an ovum to form a zygote.
The cilium is a membrane-bound organelle found on most types of eukaryotic cell. Cilia are absent in bacteria and archaea. The cilium has the shape of a slender threadlike projection that extends from the surface of the much larger cell body. Eukaryotic flagella found on sperm cells and many protozoans have a similar structure to motile cilia that enables swimming through liquids; they are longer than cilia and have a different undulating motion.
The Oomycetes, or Oomycota, form a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms within the Stramenopiles. They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction of an oospore is the result of contact between hyphae of male antheridia and female oogonia; these spores can overwinter and are known as resting spores. Asexual reproduction involves the formation of chlamydospores and sporangia, producing motile zoospores. Oomycetes occupy both saprophytic and pathogenic lifestyles, and include some of the most notorious pathogens of plants, causing devastating diseases such as late blight of potato and sudden oak death. One oomycete, the mycoparasite Pythium oligandrum, is used for biocontrol, attacking plant pathogenic fungi. The oomycetes are also often referred to as water molds, although the water-preferring nature which led to that name is not true of most species, which are terrestrial pathogens.
The Chrysophyceae, usually called chrysophytes, chrysomonads, golden-brown algae or golden algae, are a large group of algae, found mostly in freshwater. Golden algae is also commonly used to refer to a single species, Prymnesium parvum, which causes fish kills.
Proteus is a genus of Gram-negative bacteria. It is a rod shaped, aerobic and motile bacteria, which is able to migrate across surfaces due its “swarming” characteristic in temperatures between 20 and 37 °C. Their size generally ranges from 0.4 to 0.8 μm in diameter and 1.0–3.0 μm in length. They tend to have an ammonia smell. Proteus bacilli are widely distributed in nature as saprophytes, being found in decomposing animal matter, sewage, manure soil, the mammalian intestine, and human and animal feces. They are opportunistic pathogens, commonly responsible for urinary and septic infections, often nosocomial.
The Pasteurellaceae comprise a large family of Gram-negative bacteria. Most members live as commensals on mucosal surfaces of birds and mammals, especially in the upper respiratory tract. Pasteurellaceae are typically rod-shaped, and are a notable group of facultative anaerobes. Their biochemical characteristics can be distinguished from the related Enterobacteriaceae by the presence of oxidase, and from most other similar bacteria by the absence of flagella.
The Xanthomonadales are a bacterial order within the Gammaproteobacteria. They are one of the largest groups of bacterial phytopathogens, harbouring species such as Xanthomonas citri, Xanthomonas euvesicatoria, Xanthomonas oryzae and Xylella fastidiosa. These bacteria affect agriculturally important plants including tomatoes, bananas, citrus plants, rice, and coffee. Many species within the order are also human pathogens. Species within the genus Stenotrophomonas are multidrug resistant opportunistic pathogens that are responsible for nosocomial infections in immunodeficient patients.
The Alteromonadales are an order of Pseudomonadota. Although they have been treated as a single family, the Alteromonadaceae, they were divided into eight by Ivanova et al. in 2004. The cells are straight or curved rods. They are motile by the use of a single flagellum. Most of the species are marine.
Sperm is the male reproductive cell, or gamete, in anisogamous forms of sexual reproduction. Animals produce motile sperm with a tail known as a flagellum, which are known as spermatozoa, while some red algae and fungi produce non-motile sperm cells, known as spermatia. Flowering plants contain non-motile sperm inside pollen, while some more basal plants like ferns and some gymnosperms have motile sperm.
The Bacillaceae are a family of gram-positive, heterotrophic, rod-shaped bacteria that may produce endospores. Motile members of this family are characterized by peritrichous flagella. Some Bacillaceae are aerobic, while others are facultative or strict anaerobes. Most are not pathogenic, but Bacillus species are known to cause disease in humans.
Hexacorallia is a class of Anthozoa comprising approximately 4,300 species of aquatic organisms formed of polyps, generally with 6-fold symmetry. It includes all of the stony corals, most of which are colonial and reef-forming, as well as all sea anemones, and zoanthids, arranged within five extant orders. The hexacorallia are distinguished from another class of Anthozoa, Octocorallia, in having six or fewer axes of symmetry in their body structure; the tentacles are simple and unbranched and normally number more than eight. These organisms are formed of individual soft polyps which in some species live in colonies and can secrete a calcite skeleton. As with all Cnidarians, these organisms have a complex life cycle including a motile planktonic phase and a later characteristic sessile phase. Hexacorallia also include the significant extinct order of rugose corals.
In botany, a zoid or zoïd is a reproductive cell that possesses one or more flagella, and is capable of independent movement. Zoid can refer to either an asexually reproductive spore or a sexually reproductive gamete. In sexually reproductive gametes, zoids can be either male or female depending on the species. For example, some brown alga (Phaeophyceae) reproduce by producing multi-flagellated male and female gametes that recombine to form the diploid sporangia. Zoids are primarily found in some protists, diatoms, green alga, brown alga, non-vascular plants, and a few vascular plants. The most common classification group that produces zoids is the heterokonts or stramenopiles. These include green alga, brown alga, oomycetes, and some protists. The term is generally not used to describe motile, flagellated sperm found in animals. Zoid is also commonly confused for zooid which is a single organism that is part of a colonial animal.
Syndinium is a cosmopolitan genus of parasitic dinoflagellates that infest and kill marine planktonic species of copepods and radiolarians. Syndinium belongs to order Syndiniales, a candidate for the uncultured group I and II marine alveolates. The lifecycle of Syndinium is not well understood beyond the parasitic and zoospore stages.
Polarella is a dinoflagellate, and is the only extant genus of the Suessiaceae family. The genus was described in 1999 by Marina Montresor, Gabriele Procaccini, and Diane K. Stoecker, and contains only one species, Polarella glacialis. Polarella inhabits channels within ice formations in both the Arctic and Antarctic polar regions, where it plays an important role as a primary producer. Polarella is a thecate dinoflagellate, wherein the cell has an outer covering of cellulose plates, which are arranged in nine latitudinal series. The general morphology of Polarella is similar to that of a typical dinoflagellate. and Polarella has a zygotic life history, wherein it alternates between a motile vegetative phase and a non-motile spiny cyst. While it is thought that the cysts of Polarella have lost their ability to form fossils, the cyst life cycle stage has acted as link to extinct members of the Suessiaceae family.
Conserved signature inserts and deletions (CSIs) in protein sequences provide an important category of molecular markers for understanding phylogenetic relationships. CSIs, brought about by rare genetic changes, provide useful phylogenetic markers that are generally of defined size and they are flanked on both sides by conserved regions to ensure their reliability. While indels can be arbitrary inserts or deletions, CSIs are defined as only those protein indels that are present within conserved regions of the protein.
Non-motile bacteria are bacteria species that lack the ability and structures that would allow them to propel themselves, under their own power, through their environment. When non-motile bacteria are cultured in a stab tube, they only grow along the stab line. If the bacteria are mobile, the line will appear diffuse and extend into the medium. The cell structures that provide the ability for locomotion are the cilia and flagella. Coliform and Streptococci are examples of non-motile bacteria as are Klebsiella pneumoniae, and Yersinia pestis. Motility is one characteristic used in the identification of bacteria and evidence of possessing structures: peritrichous flagella, polar flagella and/or a combination of both.
Triparma is a genus of unicellular algae in the family Triparmaceae in the order Parmales. They form siliceous plates on the cell surface that aid in identification. Triparma is distinguished by its possession of three shield plates, three triradiate girdle plates, a triradiate girdle plate with notched ends, and a small ventral plate. It was first described by Booth & Marchant in 1987 and the holotype is Triparma columacea.
Tetraparma is a genus of unicellular algae in the family Triparmaceae in the order Parmales. They form siliceous plates on the cell surface that aid in identification. Tetraparma is distinguished by its possession of three shield plates that may have everted rims, three triradiate girdle plates, a triradiate dorsal plate with notched ends, and a large ventral plate. It was first described by Booth & Marchant in 1987 and the holotype is Triparma columacea.
| Authority control databases: National |
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