Apium virus Y

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Apium virus Y
Virus classification OOjs UI icon edit-ltr.svg
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Pisuviricota
Class: Stelpaviricetes
Order: Patatavirales
Family: Potyviridae
Genus: Potyvirus
Species:
Apium virus Y

Apium virus Y (ApVY) is a plant pathogenic virus [1] in the genus Potyvirus and the virus family Potyviridae .

Contents

Apium virus Y is a recently described member of the potyvirus family. It was first found in Australia in 2002 [2] in poison hemlock ( Conium maculatum : an immigrant weed in Australia). A survey of native and weed species in the family Apiaceae found ApVY to be widespread in Australia. In addition, this survey and others found two other potyviruses. One was a well-known potyvirus infecting the Apiaceae, Celery mosaic virus (CeMV). CeMV has been found in celery ( Apium graveolens ) crops worldwide, including Australia, New Zealand and the US. [3] The third potyvirus found in these surveys was another previously unknown potyvirus, Carrot virus Y (CarVY).

Geographic distribution

Since its sequence was first deposited in GenBank, [4] ApVY has been found in New Zealand, [5] Florida, [6] Washington state [7] and California [8] in the United States, and Turkey. [9]

In New Zealand, it was found in celery in a mixed infection with CeMV. [5] Two different strains of ApVY were found in Washington state, one in domestic celery crops and other in the weed poison hemlock. The one in celery was 98% identical to the Australian nucleotide sequences. The one found in naturally infected poison hemlock was only 91% identical to the sequences from Australia. The later turned out to be 98% identical to the North American isolates found in Florida and California. In turn, the Florida isolate was 90-91% identical to the Australian isolates. [7]

A third strain of this virus has been known in Germany since the early 1990s. Sequences of this virus isolated from parsley ( Petroselinum crispum ) were 94% identical to the Australian isolate from parsley.

ApVY was recently also found in Balıkesir province of Turkey, and might be distributed widely there as all 10 symptomatic parsley samples were tested positive using RT-PCR detection method. The study also successfully generated a new pair of primer for amplification of 1066 bp of ApVY genome, including the complete coat protein (CP) gene. Three of the four sequenced Turkish isolates shared a common ancestor with two Slovenian isolates which placed them in the same phylogenetic group, while another one was grouped with five USA isolates. [9]

Host range and symptoms

In addition to cultivated celery and parsley, and the weed poison hemlock, natural ApVY infections have been identified in sea celery ( Apium prostratum ), cilantro ( Coriandrum sativum ), and bishop's weed ( Ammi majus ). It has been found to be transmitted by aphid to celeriac (celery root, Apium graveolens var. rapaceum) cultivars in California. [10] All are members of the plant family Apiaceae . In another host range study, the virus causes local lesions and other symptoms on Chenopodium quinoa , Blitum capitatum , and Beta macrocarpa which belong to Amaranthaceae . [11]

Symptoms reported included mosaic, vein clearing or banding, necrotic/chlorotic line patterns and stunting. Some samples of parsley, celery and poison hemlock, that gave positive results in tests, however, were asymptomatic.

Related Research Articles

<span class="mw-page-title-main">Apiaceae</span> Family of flowering plants

Apiaceae or Umbelliferae is a family of mostly aromatic flowering plants named after the type genus Apium and commonly known as the celery, carrot or parsley family, or simply as umbellifers. It is the 16th-largest family of flowering plants, with more than 3,800 species in about 446 genera, including such well-known and economically important plants as ajwain, angelica, anise, asafoetida, caraway, carrot, celery, chervil, coriander, cumin, dill, fennel, lovage, cow parsley, parsley, parsnip and sea holly, as well as silphium, a plant whose identity is unclear and which may be extinct.

<span class="mw-page-title-main">Celery</span> Species of edible plant

Celery is a marshland plant in the family Apiaceae that has been cultivated as a vegetable since antiquity. Celery has a long fibrous stalk tapering into leaves. Depending on location and cultivar, either its stalks, leaves or hypocotyl are eaten and used in cooking. Celery seed powder is used as a spice.

<span class="mw-page-title-main">Parsley</span> Species of flowering plant in the celery family Apiaceae cultivated as an herb

Parsley, or garden parsley is a species of flowering plant in the family Apiaceae that is native to Greece, Morocco and the former Yugoslavia. It has been introduced and naturalized in Europe and elsewhere in the world with suitable climates, and is widely cultivated as a herb, and a vegetable.

<i>Conium</i> Genus of flowering plants in the celery family Apiaceae

Conium is a genus of flowering plants in the family Apiaceae. As of December 2020, Plants of the World Online accepts six species.

<i>Cicuta</i> Genus of plants

Cicuta, commonly known as water hemlock, is a genus of four species of highly poisonous plants in the family Apiaceae. They are perennial herbaceous plants which grow up to 2.5 meters (8 ft) tall, having distinctive small green or white flowers arranged in an umbrella shape (umbel). Plants in this genus may also be referred to as cowbane or poison parsnip. Cicuta is native to temperate regions of the Northern Hemisphere, mainly North America and Europe, typically growing in wet meadows, along streambanks and other wet and marshy areas. These plants bear a close resemblance to other members in the family Apiaceae and may be confused with a number of edible or poisonous plants. The common name hemlock may also be confused with poison hemlock, or with the Hemlock tree.

<i>Apium</i> Genus of flowering plants

Apium is a genus of about 20 species of flowering plants in the family Apiaceae, with a subcosmopolitan distribution in Europe, Asia, Africa, South America and Australia. They are medium to tall biennials or perennials growing up to 1 m high in the wet soil of marshes and salt marshes, and have pinnate to bipinnate leaves and small white flowers in compound umbels. Some species are edible, notably Apium graveolens, which includes the commercially important vegetables celery, celeriac and Chinese celery. Apium bermejoi from the island of Menorca is one of the rarest plants in Europe, with fewer than 100 individuals left.

<i>Potyvirus</i> Genus of positive-strand RNA viruses in the family Potyviridae

Potyvirus is a genus of positive-strand RNA viruses in the family Potyviridae. Plants serve as natural hosts. Like begomoviruses, members of this genus may cause significant losses in agricultural, pastoral, horticultural, and ornamental crops. More than 200 species of aphids spread potyviruses, and most are from the subfamily Aphidinae. The genus contains 190 species and potyviruses account for about thirty percent of all currently known plant viruses.

<i>Bidens mottle virus</i> Species of virus

Bidens mottle virus (BiMoV) is a pathogenic plant virus in the plant virus family Potyviridae. BiMoV is a flexuous filamentous particle, 720 nm long, and belongs to the Potyviridae genus Potyvirus. Like other viruses in this genus, Bidens mottle virus is transmitted both mechanically by sap and by aphids in a stylet-borne fashion.

Pepper mottle virus (PepMoV) is a plant pathogenic virus in the genus Potyvirus and the virus family Potyviridae. Like other members of the Potyvirus genus, PepMV is a monopartite strand of positive-sense, single-stranded RNA surrounded by a capsid made for a single viral encoded protein. The virus is a filamentous particle that measures about 737 nm in length. Isolates of this virus has been completely sequenced and its RNA is 9640 nucleotides long. This virus is transmitted by several species of aphids in a nonpersitant manner and by mechanical inoculation.

<i>Tobacco etch virus</i> Species of virus

Tobacco etch virus (TEV) is a plant virus in the genus Potyvirus and family Potyviridae. Like other members of the genus Potyvirus, TEV has a monopartite positive-sense, single-stranded RNA genome surrounded by a capsid made from a single viral encoded protein. The virus is a filamentous particle that measures about 730 nm in length. It is transmissible in a non-persistent manner by more than 10 species of aphids including Myzus persicae. It also is easily transmitted by mechanical means but is not known to be transmitted by seeds.

Sweet potato feathery mottle virus (SPFMV) is a member of the genus Potyvirus in the family Potyviridae. It is most widely recognized as one of the most regularly occurring causal agents of sweet potato viral disease (SPVD) and is currently observed in every continent except Antarctica. The number of locations where it is found is still increasing; generally, it is assumed that the virus is present wherever its host is. The virus has four strains that are found in varying parts of the world.

<i>Celery mosaic virus</i> Species of virus

Celery mosaic virus (CeMV) is a plant pathogenic virus in the genus Potyvirus and the virus family Potyviridae .

<i>Papilio brevicauda</i> Species of butterfly

Papilio brevicauda, the short-tailed swallowtail, is a North American butterfly in the family Papilionidae.

<i>Conium maculatum</i> Poisonous herbaceous plant in the carrot family

Conium maculatum, colloquially known as hemlock, poison hemlock or wild hemlock, is a highly poisonous biennial herbaceous flowering plant in the carrot family Apiaceae, native to Europe and North Africa. A hardy plant capable of living in a variety of environments, hemlock is widely naturalized in locations outside its native range, such as parts of Australia, West Asia, and North and South America, to which it has been introduced. It is capable of spreading and thereby becoming an invasive weed.

Commelina mosaic virus (CoMV) is a plant pathogenic virus in the genus Potyvirus and the virus family Potyviridae. Like other members of the Potyvirus genus, CoMV is a monopartite strand of positive-sense, single-stranded RNA surrounded by a capsid made for a single viral encoded protein. The virus is a filamentous particle that measures about 707-808 nm in length. This virus is transmitted by two species of aphids, Myzus persicae and Aphis gossypii, and by mechanical inoculation.

Clover yellow vein virus (ClYVV) is a plant pathogenic virus in the genus Potyvirus and the virus family Potyviridae. Like other members of the Potyvirus genus, ClYVV is a monopartite strand of positive-sense, single-stranded RNA surrounded by a capsid made for a single viral encoded protein. The virus is a filamentous particle that measures about 760 nm in length. This virus is transmitted by several species of aphids in a nonpersistent manner and by mechanical inoculation.

Passion fruit woodiness virus (PWV) is a plant pathogenic virus in the genus Potyvirus and the virus family Potyviridae. Like other members of the genus Potyvirus, PWV is a monopartite strand of positive-sense, single-stranded RNA surrounded by a capsid made for a single viral encoded protein. The virus is a filamentous particle that measures about 745 nm in length.

<i>Watermelon mosaic virus</i> Species of virus

Watermelon mosaic virus (WMV) also known as Marrow mosaic virus, Melon mosaic virus, and until recently Watermelon mosaic virus type 2 (WMV-2), is a plant pathogenic virus that causes viral infection in many different plants. The virus itself is referred to as Watermelon Mosaic Virus II or WMV-2 and is an isolate of the U.S. WMV-2 is a ssRNA positive strand virus that is part of the Potyviridae or Potyvirus clade. Like all RNA viruses, it contains a protein capsid which protects the inner viral RNA. First described on squash in Florida, WMV arose from a unique recombination of genetic material contributed by Soybean mosaic virus (SMV) and Bean common mosaic virus (BCMV) along with Peanut Stripe virus (PSV).

Carrot virus Y (CarVY) is a (+)ss-RNA virus that affects crops of the carrot family (Apiaceae), such as carrots, anise, chervil, coriander, cumin, dill and parsnip. Carrots are the only known crop to be infected in the field. Infection by the virus leads to deformed roots and discolored or mottled leaves. The virus is spread through insect vectors, and is currently only found in Australia.

<i>Onion yellow dwarf virus</i> Species of virus

Onion yellow dwarf virus (OYDV) is a plant virus in the genus Potyvirus that has been identified worldwide and mainly infects species of Allium such as onion, garlic, and leek. The virus causes mild to severe leaf malformation, and bulb reduction up to sixty percent has been observed in garlic.

References

  1. "About Plant Viruses / Florida Plant Viruses / Florida Plant Viruses and Their Inclusions / Science / Plant Industry / Divisions & Offices / Home - Florida Department of Agriculture & Consumer Services". www.freshfromflorida.com. Archived from the original on 10 October 2014. Retrieved 31 January 2018.
  2. Moran, J. et al., 2002. Potyviruses, novel and known, in cultivated and wild species of the family Apiaceae in Australia. Arch. Virol 147:1855-1967.
  3. Descriptions of Plant Viruses Celery mosaic virus
  4. "Apium virus Y strain conium maculatum polyprotein gene, partial cds - Nucleotide - NCBI". www.ncbi.nlm.nih.gov. 30 September 2001.
  5. 1 2 J. Tang, G. R. G. Clover, and B. J. R. Alexander 2007. First Report of Apium virus Y in Celery in New Zealand, Plant Disease 91: 1682
  6. Baker, C.A., Rosskopf, E.N., Irey, M.S., Jones, L., Adkins, S.T. 2008. Bidens mottle virus and Apium virus Y identified in Ammi majus in Florida Plant Disease. 92:6:975.
  7. 1 2 K. C. Eastwell, J. R. Glass, L. M. Seymour, and K. J. Druffel. 2008. First Report of Infection of Poison Hemlock and Celery by Apium virus Y in Washington State Plant Disease 92: 1710.
  8. T. Tian, H.-Y. Liu, and S. T. Koike. 2008. First Report of Apium virus Y on Cilantro, Celery, and Parsley in California. Plant Dis. 92:1254
  9. 1 2 Karanfil, Ali; Sarı, Merve; Randa‐Zelyüt, Filiz; Santosa, Adyatma Irawan; Korkmaz, Savaş (January 2022). "First report of Apium virus Y infecting Petroselinum crispum in Turkey". New Disease Reports. 45 (1): e12059. doi:10.1002/ndr2.12059. S2CID   246708143.
  10. Koike, Steven T.; Liu, Hsing-Yeh; Sears, John; Tian, Tongyan; Daugovish, Oleg; Dara, Surendra (May 2012). "Distribution, Cultivar Susceptibility, and Epidemiology of Apium virus Y on Celery in Coastal California". Plant Disease. 96 (5): 612–617. doi:10.1094/PDIS-08-11-0704.
  11. Xu, Donglin; Liu, Hsing-Yeh; Koike, Steven T.; Li, Fan; Li, Ruhui (January 2011). "Biological characterization and complete genomic sequence of Apium virus Y infecting celery". Virus Research. 155 (1): 76–82. doi:10.1016/j.virusres.2010.09.002.