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Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the "ascus", a microscopic sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of Ascomycota are asexual and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, brewers' and bakers' yeast, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens such as Cladonia belong to the Ascomycota.
A mold or mould is one of the structures that certain fungi can form. The dust-like, colored appearance of molds is due to the formation of spores containing fungal secondary metabolites. The spores are the dispersal units of the fungi. Not all fungi form molds. Some fungi form mushrooms; others grow as single cells and are called microfungi.
A mycorrhiza is a symbiotic association between a fungus and a plant. The term mycorrhiza refers to the role of the fungus in the plant's rhizosphere, its root system. Mycorrhizae play important roles in plant nutrition, soil biology, and soil chemistry.
Beginning in 1867, a lichen was understood as a symbiosis of an algae or cyanobacteria, living among filaments of multiple fungi species. In 2016, new research by T. Spribille et al. revealed a third partner, a yeast imbedded in the lichen cortex or "skin."
An arbuscular mycorrhiza (AM) is a type of mycorrhiza in which the symbiont fungus penetrates the cortical cells of the roots of a vascular plant forming arbuscules. Arbuscular mycorrhiza is a type of endomycorrhiza along with ericoid mycorrhiza and orchid mycorrhiza. They are characterized by the formation of unique tree-like structures, the arbuscules. In addition, globular storage structures called vesicles are often encountered.
The Rhynie chert is a Lower Devonian sedimentary deposit exhibiting extraordinary fossil detail or completeness. It is exposed near the village of Rhynie, Aberdeenshire, Scotland; a second unit, the Windyfield chert, is located some 700 m away. The Rhynie chert contains exceptionally preserved plant, fungus, lichen and animal material preserved in place by an overlying volcanic deposit. The bulk of the Devonian fossil bed consists of primitive plants, along with arthropods, lichens, algae and fungi.
Bioerosion describes the breakdown of hard ocean substrates – and less often terrestrial substrates – by living organisms. Marine bioerosion can be caused by mollusks, polychaete worms, phoronids, sponges, crustaceans, echinoids, and fish; it can occur on coastlines, on coral reefs, and on ships; its mechanisms include biotic boring, drilling, rasping, and scraping. On dry land, bioerosion is typically performed by pioneer plants or plant-like organisms such as lichen, and mostly chemical or mechanical in nature.
Geotrichum candidum is a fungus which is a member of the human microbiome, notably associated with skin, sputum, and faeces where it occurs in 25–30% of specimens. It is common in soil and has been isolated from soil collected around the world, in all continents.
Radiotrophic fungi are fungi that can perform the hypothetical biological process called radiosynthesis, which means using ionizing radiation as an energy source to drive metabolism. It has been claimed that radiotrophic fungi have been found in extreme environments such as in the Chernobyl Nuclear Power Plant.
Trebouxia is a unicellular green alga. It is a photosynthetic organism that can exist in almost all habitats found in polar, tropical, and temperate regions. It can either exist in a symbiotic relationship with fungi in the form of lichen or it can survive independently as a free-living organism alone or in colonies. Trebouxia is the most common photobiont in extant lichens. It is a primary producer of marine, freshwater and terrestrial ecosystems. It uses carotenoids and chlorophyll a and b to harvest energy from the sun and provide nutrients to various animals and insects.
A fungus is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as one of the traditional eukaryotic kingdoms, along with Animalia, Plantae and either Protista or Protozoa and Chromista.
Conidiobolus coronatus is a saprotrophic fungus, first described by Costantin in 1897 as Boudierella coronata. Though this fungus has also been known by the name Entomophthora coronata, the correct name is Conidiobolus coronatus. C. coronatus is able to infect humans and animals, and the first human infection with C. coronatus was reported in Jamaica in 1965.
The Nidulariaceae are a family of fungi in the order Agaricales. Commonly known as the bird's nest fungi, their fruiting bodies resemble tiny egg-filled birds' nests. As they are saprobic, feeding on decomposing organic matter, they are often seen growing on decaying wood and in soils enriched with wood chips or bark mulch; they have a widespread distribution in most ecological regions. The five genera within the family, namely, Crucibulum, Cyathus, Mycocalia, Nidula, and Nidularia, are distinguished from each other by differences in morphology and peridiole structure; more recently, phylogenetic analysis and comparison of DNA sequences is guiding new decisions in the taxonomic organization of this family.
Marine fungi are species of fungi that live in marine or estuarine environments. They are not a taxonomic group, but share a common habitat. Obligate marine fungi grow exclusively in the marine habitat while wholly or sporadically submerged in sea water. Facultative marine fungi normally occupy terrestrial or freshwater habitats, but are capable of living or even sporulating in a marine habitat. About 444 species of marine fungi have been described, including seven genera and ten species of basidiomycetes, and 177 genera and 360 species of ascomycetes. The remainder of the marine fungi are chytrids and mitosporic or asexual fungi. Many species of marine fungi are known only from spores and it is likely a large number of species have yet to be discovered. In fact, it is thought that less than 1% of all marine fungal species have been described, due to difficulty in targeting marine fungal DNA and difficulties that arise in attempting to grow cultures of marine fungi. It is impracticable to culture many of these fungi, but their nature can be investigated by examining seawater samples and undertaking rDNA analysis of the fungal material found.
An ectomycorrhiza is a form of symbiotic relationship that occurs between a fungal symbiont, or mycobiont, and the roots of various plant species. The mycobiont is often from the phyla Basidiomycota and Ascomycota, and more rarely from the Zygomycota. Ectomycorrhizas form on the roots of around 2% of plant species, usually woody plants, including species from the birch, dipterocarp, myrtle, beech, willow, pine and rose families. Research on ectomycorrhizas is increasingly important in areas such as ecosystem management and restoration, forestry and agriculture.
Coniochaeta hoffmannii, also known as Lecythophora hoffmannii, is an ascomycete fungus that grows commonly in soil. It has also been categorized as a soft-rot fungus capable of bringing the surface layer of timber into a state of decay, even when safeguarded with preservatives. Additionally, it has pathogenic properties, although it causes serious infection only in rare cases. A plant pathogen lacking a known sexual state, C. hoffmannii has been classified as a "dematiaceous fungus" despite its contradictory lack of pigmentation; both in vivo and in vitro, there is no correlation between its appearance and its classification.
Crustose lichens are lichens that form a crust which strongly adheres to the substrate, making separation from the substrate impossible without destruction. The basic structure of crustose lichens consists of a cortex layer, an algal layer, and a medulla. The upper cortex layer is differentiated and is usually pigmented. The algal layer lies beneath the cortex. The medulla fastens the lichen to the substrate and is made up of fungal hyphae. The surface of crustose lichens is characterized by branching cracks that periodically close in response to climatic variations such as alternate wetting and drying regimes.
A foliose lichen is a lichen with flat, leaf-like lobes, which are generally not firmly bonded to the substrate on which it grows. It is one of the three most common growth forms of lichens. It typically has distinct upper and lower surfaces, each of which is usually covered with a cortex; some, however, lack a lower cortex. The photobiont layer lies just below the upper cortex. Where present, the lower cortex is usually dark, but occasionally white. Foliose lichens are attached to their substrate either by hyphae extending from the cortex or medulla, or by root-like structures called rhizines. The latter, which are found only in foliose lichens, come in a variety of shapes, the specifics of which can aid in species identification. Some foliose lichens attach only at a single stout peg called a holdfast, typically located near the lichen's centre. Lichens with this structure are called "umbilicate". In general, medium to large epiphytic foliose lichens are moderately sensitive to air pollution, while smaller or ground-dwelling foliose lichens are more tolerant. The term "foliose" derives from the Latin word foliosus, meaning "leafy".
Lichens are symbiotic organisms made up of multiple species: a fungus, one or more photobionts and sometimes a yeast. They are regularly grouped by their external appearance – a characteristic known as their growth form. This form, which is based on the appearance of vegetative part of the lichen, varies depending on the species and the environmental conditions it faces. Those who study lichens (lichenologists) have described a dozen of these forms: areolate, byssoid, calicioid, cladoniform, crustose, filamentous, foliose, fruticose, gelatinous, leprose, placoidioid and squamulose. Traditionally, crustose (flat), foliose (leafy) and fruticose (shrubby) are considered to be the three main forms. In addition to these more formalised, traditional growth types, there are a handful of informal types named for their resemblance to the lichens of specific genera. These include alectorioid, catapyrenioid, cetrarioid, hypogymnioid, parmelioid and usneoid.
This glossary of mycology is a list of definitions of terms and concepts relevant to mycology, the study of fungi. Terms in common with other fields, if repeated here, generally focus on their mycology-specific meaning. Related terms can be found in glossary of biology and glossary of botany, among others. List of Latin and Greek words commonly used in systematic names and Botanical Latin may also be relevant, although some prefixes and suffixes very common in mycology are repeated here for clarity.
References
- ↑ Krumbein, WE; Jens, K (1981). "Biogenic rock varnishes of the negev desert (Israel) an ecological study of iron and manganese transformation by cyanobacteria and fungi". Oecologia. 50 (1): 25–38. Bibcode:1981Oecol..50...25K. doi:10.1007/bf00378791. PMID 28310059. S2CID 27020398.
- 1 2 Sterflinger, Katja; Krumbein, Wolfgang E. (1997). "Dematiaceous fungi as a major agent for biopitting on Mediterranean marbles and limestones". Geomicrobiology Journal. 14 (3): 219–230. Bibcode:1997GmbJ...14..219S. doi:10.1080/01490459709378045.
- ↑ McIlroy de la Rosa, John P; Warke, Patricia A; Smith, BErnard J (2012). "Microscale biopitting by the endolithic lichen Verrucaria baldensis and its proposed role in mesoscale solution basin development on limestone". Earth Surface Processes and Landforms . 37 (4): 374–384. Bibcode:2012ESPL...37..374M. doi:10.1002/esp.2244. S2CID 128780407.