Candida humilis

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Candida humilis
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Kingdom: Fungi
Division: Ascomycota
Class: Saccharomycetes
Order: Saccharomycetales
Family: Saccharomycetaceae
Genus: Candida
Species:
C. humilis
Binomial name
Candida humilis
(E.E.Nel & Van der Walt) S.A.Mey. & Yarrow (1978)
Synonyms [1]
  • Torulopsis humilisE.E.Nel & Van der Walt (1968)
  • Torulopsis acidi-lacticiNakase, Komag. & Konishi (1977)
  • Candida milleriYarrow (1978) [2]

Kazachstania humilis (prev. Candida humilis) is a species of yeast in the genus Kazachstania . [3] It commonly occurs in sourdough and kefir cultures, along with different species of lactic acid bacteria (e.g., Limosilactobacillus fermentum , Companilactobacillus paralimentarius , Lactiplantibacillus plantarum , and Fructilactobacillus sanfranciscensis ). [4] [5] [6] K. humilis is the most representative yeast species found in type I sourdough ecosystems. The effects of electric field strength, pulse width and frequency, or pulse shape is significant on the membranes of Candida humilis, but not very noticeable. [7]

K. humilis was separated from C. milleri in The Yeasts (fifth edition) in September 2016, [8] although this is not universally accepted and they are still considered synonymous.

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<span class="mw-page-title-main">Sourdough</span> Bread

Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities.

<i>Lactobacillus</i> Genus of bacteria

Lactobacillus is a genus of gram-positive, aerotolerant anaerobes or microaerophilic, rod-shaped, non-spore-forming bacteria. Until 2020, the genus Lactobacillus comprised over 260 phylogenetically, ecologically, and metabolically diverse species; a taxonomic revision of the genus assigned lactobacilli to 25 genera.

<i>Candida</i> (fungus) Genus of ascomycete fungi

Candida is a genus of yeasts. It is the most common cause of fungal infections worldwide and the largest genus of medically important yeast.

Fructilactobacillus sanfranciscensis is a heterofermentative species of lactic acid bacteria which, through the production mainly of lactic and acetic acids, helps give sourdough bread its characteristic taste. It is named after San Francisco, where sourdough was found to contain the variety, though it is dominant in Type I sourdoughs globally. In fact, F. sanfranciscensis has been used in sourdough breads for thousands of years, and is used in 3 million tons of sourdough goods yearly.

Pediococcus is a genus of gram-positive lactic acid bacteria, placed within the family of Lactobacillaceae. They usually occur in pairs or tetrads, and divide along two planes of symmetry, as do the other lactic acid cocci genera Aerococcus and Tetragenococcus. They are purely homofermentative.

Leuconostoc is a genus of gram-positive bacteria, placed within the family of Lactobacillaceae. They are generally ovoid cocci often forming chains. Leuconostoc spp. are intrinsically resistant to vancomycin and are catalase-negative. All species within this genus are heterofermentative and are able to produce dextran from sucrose. They are generally slime-forming.

Limosilactobacillus reuteri is a lactic acid bacterium found in a variety of natural environments, including the gastrointestinal tract of humans and other animals. It does not appear to be pathogenic and may have health effects.

<span class="mw-page-title-main">Lactobacillaceae</span> Family of bacteria

The Lactobacillaceae are a family of lactic acid bacteria. It is the only family in the lactic acid bacteria which includes homofermentative and heterofermentative organisms; in the Lactobacillaceae, the pathway used for hexose fermentation is a genus-specific trait. Lactobacillaceae include the homofermentative lactobacilli Lactobacillus, Holzapfelia, Amylolactobacillus, Bombilactobacillus, Companilactobacillus, Lapidilactobacillus, Agrilactobacillus, Schleiferilactobacillus, Loigolactobacillus, Lacticaseibacillus, Latilactobacillus, Dellaglioa, Liquorilactobacillus, Ligilactobacillus, and Lactiplantibacillus; the heterofermentative lactobacilli Furfurilactobacillus, Paucilactobacillus, Limosilactobacillus, Fructilactobacillus, Acetilactobacillus, Apilactobacillus, Levilactobacillus, Secundilactobacillus, and Lentilactobacillus, which were previously classified in the genus Lactobacillus; and the heterofermentative genera Convivina, Fructobacillus, Leuconostoc, Oenococcus, and Weissella which were previously classified in the Leuconostocaceae.

Limosilactobacillus fermentum is a Gram-positive species in the heterofermentative genus Limosilactobacillus. It is associated with active dental caries lesions. It is also commonly found in fermenting animal and plant material including sourdough and cocoa fermentation. A few strains are considered probiotic or "friendly" bacteria in animals and at least one strain has been applied to treat urogenital infections in women. Some strains of lactobacilli formerly mistakenly classified as L. fermentum have since been reclassified as Limosilactobacillus reuteri. Commercialized strains of L. fermentum used as probiotics include PCC, ME-3 and CECT5716

<span class="mw-page-title-main">Vaginal yeast infection</span> Medical condition

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<span class="mw-page-title-main">Kefir</span> Fermented milk drink made from kefir grains

Kefir is a fermented milk drink similar to a thin yogurt or ayran that is made from kefir grains, a specific type of mesophilic symbiotic culture. It is prepared by inoculating the milk of cows, goats, or sheep with kefir grains.

<i>Latilactobacillus sakei</i> Species of bacterium

Latilactobacillus sakei is the type species of the genus Latilactobacillus that was previously classified in the genus Lactobacillus. It is homofermentative; hexoses are metabolized via glycolysis to lactic acid as main metabolite; pentoses are fermented via the Phosphoketolase pathway to lactic and acetic acids.

Limosilactobacillus pontis is a rod-shaped, Gram-positive facultatively anaerobic bacterium. Along with other Lactobacillus species, it is capable of converting sugars, such as lactose, into lactic acid. Limosilactobacillus pontis is classified under the phylum Bacillota, class Bacilli, and is a member of the family Lactobacillaceae and is found to be responsible for the fermentation of sourdough, along with many other Lactobacillus species. This microorganism produces lactic acid during the process of fermentation, which gives sourdough bread its characteristic sour taste.

Ligilactobacillus acidipiscis is a species in the genus Ligilactobacillus. It is a homofermentative, rod-shaped lactic acid bacteria. Its type strain is FS60-1T.

Lactobacillus crispatus is a common, rod-shaped species of genus Lactobacillus and is a hydrogen peroxide (H2O2) producing beneficial microbiota species located in both the vagina, through vaginal discharge, and the vertebrate gastrointestinal tract. The strain CTV-05 is used as a probiotic that can be used by premenopausal and postmenopausal women that experience recurrent urinary tract infections. It is being evaluated specifically for the prevention and treatment of bacterial vaginosis, which is characterized by the absence of Lactobacillus flora necessary to protect the host from infection.

Weissella koreensis is a species of Gram-positive bacteria in the family Leuconostocaceae. The bacteria has irregular cells, is tolerant of acid, and does not develop spores. It was described by Lee et al. in 2002.

Weissella ceti is a Gram-positive and non-spore-forming bacterium from the genus of Weissella which was first isolated from beaked whales. Erstwhile believed that W. ceti could cause hemorrhagic illness in Rainbow trouts, however, seems to be a different species from the same genus: Weissella tructae.

Limosilactobacillus is a thermophilic and heterofermentative genus of lactic acid bacteria created in 2020 by splitting from Lactobacillus. The name is derived from the Latin limosus "slimy", referring to the property of most strains in the genus to produce exopolysaccharides from sucrose. The genus currently includes 31 species or subspecies, most of these were isolated from the intestinal tract of humans or animals. Limosilactobacillus reuteri has been used as a model organism to evaluate the host-adaptation of lactobacilli to the human and animal intestine and for the recruitment of intestinal lactobacilli for food fermentations.

<span class="mw-page-title-main">Ligilactobacillus animalis</span> Species of bacterium

Ligilactobacillus animalis is a non-motile, homofermentative species in the Gram-positive genus Ligilactobacillus, initially isolated from the dental plaque of primates and intestinal samples of a dog and mouse. L. animalis has optimal growth at 37°C on MRS agar, making this species mesophilic. The first reported isolates could ferment cellobiose, fructose, glucose, lactose, maltose, melibiose, raffinose, and salicin, but not xylose. The genome size of the type strain is 1.89 Mbp and the G/C content is 41.1%.

References

  1. "GSD Species Synonymy: Candida humilis (E.E. Nel & Van der Walt) S.A. Mey. & Yarrow". Species Fungorum. CAB International. Retrieved 2016-05-30.
  2. Yarrow D. (1978). "Candida milleri sp.nov". International Journal of Systematic Bacteriology. 28 (4): 608–610. doi: 10.1099/00207713-28-4-608 .
  3. Wittwer, Anna E.; Sicard, Delphine; Howell, Kate S. (2022-10-01). "Kazachstania humilis". Trends in Microbiology. 30 (10): 1012–1013. doi:10.1016/j.tim.2022.05.007. ISSN   0966-842X. PMID   35659741. S2CID   249289280.
  4. De Vuyst L, Van Kerrebroeck S, Harth H, Huys G, Daniel HM, Weckx S (2014). "Microbial ecology of sourdough fermentations: diverse or uniform?". Food Microbiology. 37: 11–29. doi:10.1016/j.fm.2013.06.002. PMID   24230469.
  5. Zheng, Jinshui; Wittouck, Stijn; Salvetti, Elisa; Franz, Charles M.A.P.; Harris, Hugh M.B.; Mattarelli, Paola; O’Toole, Paul W.; Pot, Bruno; Vandamme, Peter; Walter, Jens; Watanabe, Koichi; Wuyts, Sander; Felis, Giovanna E.; Gänzle, Michael G.; Lebeer, SarahYR 2020 (2020). "A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae". International Journal of Systematic and Evolutionary Microbiology. 70 (4): 2782–2858. doi: 10.1099/ijsem.0.004107 . hdl: 10067/1738330151162165141 . ISSN   1466-5034. PMID   32293557. S2CID   215771564.{{cite journal}}: CS1 maint: numeric names: authors list (link)
  6. Vigentini I, Antoniani D, Roscini L, Comasio A, Galafassi S, Picozzi C, Corte L, Compagno C, Dal Bello F, Cardinali G, Foschino R (2014). "Candida milleri species reveals intraspecific genetic and metabolic polymorphisms". Food Microbiology. 42: 72–81. doi:10.1016/j.fm.2014.02.011. PMID   24929720.
  7. Ou, Qi-Xing; Nikolic-Jaric, Marija; Gänzle, Michael (June 2017). "Mechanisms of inactivation of Candida humilis and Saccharomyces cerevisiae by pulsed electric fields". Bioelectrochemistry. 115: 47–55. doi:10.1016/j.bioelechem.2016.12.005. PMID   28063751. S2CID   33863955.
  8. "Kazachstania humilis NCBI:txid51915" . Retrieved 2019-10-12.