Comparison of reference management software

Last updated

The following tables compare notable reference management software. The comparison includes older applications that may no longer be supported, as well as actively-maintained software.

Contents

General

In the "notes" section, there is a difference between:

SoftwareDeveloperFirst public releaseLatest stable release dateLatest stable versionCost (USD) Free software LicenseNotes
Bebop ALaRI Institute 2007-11-082009-11-101.1FreeYes BSD Web-based BibTeX front-end (Apache, PHP, MySQL)
BibBase Christian Fritz20052013-07v3FreeNo Proprietary Centrally hosted website, intended for publication pages
BibDesk BibDesk developers2002-042024-02-261.9.2FreeYes BSD BibTeX front-end + repository; Cocoa-based; integration with Spotlight
BibSonomy University of Kassel 2006-012019-12-113.9.2FreeYes AGPL, GPL, LGPL [1] Centrally hosted website
Bookends Sonny Software1988 (Mac) / 1983 (Apple II+)2023-05-0614.2 [2] US$59.99 [lower-alpha 1] No Proprietary Desktop & iOS synced via iCloud, integrated web search, PDF download, auto-completion, Word plugin, BibTex support, PDF annotations stored as notes
Citavi Lumivero2006-02-132023-08-156.17.0.0 US$89-1947 [lower-alpha 2] No Proprietary Data can be saved locally on the computer, or, for team access, in the Citavi Cloud or an intranet Microsoft SQL Server; [3] search databases from interface [4]
EndNote Clarivate Analytics 19882021-11-3020.2.1 US$299.95 [lower-alpha 1] No Proprietary The web version EndNote basic (formerly, EndNote Web) is free of charge
JabRef JabRef developers2003-11-292023-10-215.11FreeYes MIT license Java BibTeX and BibLaTeX manager
KBibTeX KBibTeX developers2005-082020-04-260.9.2FreeYes GNU GPL BibTeX front-end, using the KDE Software Compilation
Mendeley Elsevier 2008-0820201.19.8Free / Online storage free up to 2 GB / Additional storage space availableNo proprietary (OS API clients exist)Account required, Desktop & Web components, Windows, Linux, macOS (not macOS 11 Big Sur)
Paperpile Stefan Washietl, Gregorgy Jordan, Andreas Gruber2013Continually updated online US$2.99/month for academics, 9.99/month otherwiseNo Proprietary Web-app, integrates with Google Docs, collaboration & sharing features, currently only on Google Chrome
Papers ReadCube2011-102023-04-04v.4.35.2224 US$ 3/month for students, 5/month academicsNo Proprietary Web-app, Desktop (MacOS, Windows), Mobile (iOS and Android). Microsoft Word and Google Docs add-in. Browser extension (Chrome, Firefox, Edge, Safari)
Pybliographer pybliographer developers1998-10-30 (0.2)2018-04-031.4.0FreeYes GNU GPL Python/GTK2
refbase refbase developers2003-06-032014-02-280.9.6FreeYes GNU GPL Web-based for institutional repositories/self-archiving [5]
RefDB refdb developers2001-04-252007-11-050.9.9FreeYes GNU GPL Network-transparent; XML/SGML bibliographies
RefWorks Ex Libris / ProQuest200120224.6Institutional subscriptionNo Proprietary Web-based, browser-accessed, Word & Google Docs
Wikindx Mark Grimshaw, Stéphane Aulery2003-022024-04-136.9.1FreeYes ISC license Web-based, for PHP and MySQL/MariaDB
Zotero Roy Rosenzweig Center for History and New Media at GMU 20062024-02-246.0.30 [6] Free / Online storage free up to 300 MB / Additional storage space availableYes AGPL Multi-platform desktop version with connectors for Firefox, Chrome and Safari. Web-based access to reference library also available through Zotero.org or through a personal cloud-based database folder on a user's computer (Google Drive, Dropbox, etc.).

Operating system support

In the case of web applications, this describes the server OS. For centrally hosted websites that are proprietary, this is not applicable. Any client OS can connect to a web service unless stated otherwise in a footnote.

Software Windows macOS Linux ChromeOS BSD Unix iOS App Android App Windows App
BebopYesYesYes ?YesYesNoNoNo
BibBase ? ? ?
BibDeskNoYesNoNoNoNoNoNoNo
BibSonomy ? ? ?
BookendsNoYesNo ?NoNoYes ? ?
CitaviYesNoNoNoNoNoNoNoNo
EndNoteYesYesNoNoNoNoYesNoNo
JabRefYesYesYesNoNoYesNoNoNo
KBibTeXExperimentalExperimentalYes ?YesYesNoNoNo
MendeleyYesYesYesNoNoNoNo
(phased out as of March 15, 2021) [7]
No
(phased out as of March 15, 2021) [7]
No
PaperpileYesYesYesYesNo
(requires Chromium)
No
(requires Chromium)
Yes [8] Yes [9] No
PapersYesYesNoYesNoNoYesYesYes
PybliographerPartial [lower-alpha 3] Partial [lower-alpha 3] Yes ?YesYesNoNoNo
refbaseYesYesYes ?YesYesNoNoNo
RefDBYesYesYes ?YesYesNoNoNo
RefWorks [10] YesYesNoYesYes ?No ?No
Wikindx
ZoteroYesYesYesIntel onlyNoYesYesThird party [11] No

Export file formats

This table lists the machine-readable file formats that can be exported from reference managers. These are typically used to share data with other reference managers or with other people who use a reference manager. To exchange data from one program to another, the first program must be able to export to a format that the second program may import. Import file formats are in a table below this one.

Software BibTeX Endnote/Refer/BibIX Medline MODS XML RIS Other
BebopYesNoNoNoNo unAPI
BibBaseYesNoNoNoNoNone
BibDeskYesNoYesYesYesEndnote XML, user customizable
BibSonomyYesYesNoNoYesVarious [12]
BookendsYesYesYesNoYesVarious user-customizable
CitaviYesYesYesYesYesNVivo and various others
EndNoteYesYesYesNoYesVarious [13]
JabRefYesYesNoYesYesBibTeXML, DocBook, HTML, OpenDocument for OO.o, RTF, SQL database, user-customizable
KBibTeXYesYesNoDepends [lower-alpha 4] YesPDF, PostScript, HTML, XML, RTF
MendeleyYesYesNoNoYes Endnote XML
PaperpileYesNoNoNoYesCSV,JSON
PapersYesYesNoNoYesNone
PybliographerYesYesYesNoNo Ovid
refbaseYesYesNoYesYes COinS, OpenDocument for OO.o, SRW XML via SRU, unAPI, Word XML
RefDBYesYesNoYesYes SRW XML via SRU web service, DocBook, TEI
RefWorksYesYesNoYesYesRIS, BibTeX, Tab delimited or XML metadata
WikindxYesYesNoNoYes COinS, HTML, PubMed, RTF
ZoteroYesYesAs of version 4.0 [14] YesYes COinS, CSV, Several RDF format standards, TEI, Wikipedia citation templates, Endnote XML, CSL JSON, Refer/BiblX, RefWorks tagged

Import file formats

This table lists the file formats which may be manually imported into the reference managers without needing to connect to one particular database. Many of these database companies use the same name for their file format as they do for their database (including Copac, CSA, ISI, Medline, Ovid, PubMed, and SciFinder). For the ability to retrieve citations from the particular databases (rather than the file format), please refer to the database connectivity table that is below this table.

As of January 2021, CSL YAML is not supported by any reference management system. [15]

Software BibTeX Copac CSA Endnote/Refer/BibIX ISI Medline MODS XML Ovid PubMed RIS SciFinder Other
BebopYesNoNoNoNoNoNoNoNoNoNoNone
BibBaseYesNoNoNoNoNoNoNoNoNoNoNone
BibDeskYesYesNoYesYesYesYesNoYesYesYesMARC, JSTOR, Reference Miner
BibSonomyYesNoNoYesNoNoNoNoNoNoNo Firefox bookmarks
BookendsYesYesYesYesYesYesNoYesYesYesYesVarious user-customizable
CitaviYesYesYesYesYesYesYesYesYesYesYesVarious
EndNoteNoNoYesYesYesYesNoYesYesYesYesVarious [16]
JabRefYesYesYesYesYesYesYesYesYesYesYes BibTexML, Biomail, Inspec, JSTOR, MSBib, PDF widh XMP annotations, REPEC (NEP), SilverPlatter, SixPack
KBibTeXYesNoNoYesNoNoDepends [lower-alpha 4] NoYesYesNoNone
MendeleyYesNoNoYesNoNoNoNoNoYesNo Browser bookmarks
PaperpileYesNoNoYesYesYesNoNoYesYesNoPDF, MARC
PapersYesNoNoYesNoNoNoNoYesYesNoPDF
PybliographerYesNoNoYesYesYesNoYesNoNoNoNone
refbaseYesYesYesYesYesYesYesNoYesYesYes RefWorks
RefDBYesYes [lower-alpha 4] NoYes [lower-alpha 4] Yes [lower-alpha 4] YesYesNoYesYesYes [lower-alpha 4] MARC, risx
RefWorksYesYesYesYesYesYesYesYesYesYesYesVarious [17]
WikindxYesNoNoYesNoNoNoYesYesNoNoBibReX LaTeX
ZoteroYesNo [lower-alpha 5] No [lower-alpha 5] YesYesYesYesYesYesYesNo COinS, MARC, RDF, unAPI, Browser bookmarks, Endnote XML, others [18]

Citation styles

Software APA Chicago/Turabian Harvard MLA OtherExtension method
BebopNoNoNoNoNoNo
BibBaseYesNoNoNoNoNo
BibDeskYesYesYesYesVarious [19] BibTeX style files (use Pandoc § CiteProc for CSL [20] ) or BibDesk export templates [19]
BibSonomyYesNoYesNoNoNo
BookendsYesYesYesYesVarious[ citation needed ] ?
CitaviYesYesYesYesVarious [21] Citavi format (through GUI), includes conditions and programmable components; [21] BibTeX or BibLaTeX when used with LaTeX (use Pandoc § CiteProc for CSL [20] )
EndNoteYesYesYesYesVarious [13] EndNote format (through GUI) [13]
JabRefYesYesYesYesVarious BibTeX style files or BibLaTeX (use Pandoc § CiteProc for CSL [20] )
KBibTeXYesYesYesYesVarious BibTeX style files (use Pandoc § CiteProc for CSL [20] )
MendeleyYesYesYesYesVarious [22] CSL [22]
PaperpileYesYesYesYesVarious [22] CSL [22]
PapersYesYesYesYesVarious [22] CSL; BibTeX or BibLaTeX when used with LaTeX [23]
PybliographerYesNoNoNoNonePybliographer XML
refbaseYesYesYesYesVarious polar & marine journals PHP
RefDBYesYesYesYes21 biomedical & law journals [24] XML (citestylex.dtd), interactive script
RefWorksYesYesYesYesVariousRefWorks format (through GUI); [25] CSL [22]
WikindxYesYesYesYesABNT, BMJ, IEEE Wikindx format (through GUI)
ZoteroYesYesYesYesVarious [22] CSL; [22] BibTeX or BibLaTeX when used with LaTeX [26]

Reference list file formats

Endnote is incompatible with LaTeX. Among other things, it does not provide for robust citation keys.

Software HTML LaTeX [lower-alpha 6] RTF Plain text RSS Other
BebopYesNoNoNoYes unAPI
BibBaseYesNoNoNoYesNo
BibDeskYesYesYesYesYes Atom, DOC, PDF, XML,
BibSonomyYesNoYesYesYes OpenOffice-CSV
BookendsYesNoYesYesNo Clipboard
CitaviYesYes [lower-alpha 7] YesYesNo Clipboard, DOC, ODT, PDF, HTML
EndNoteYesNoYesYesNo Clipboard, XML
JabRefYesYesYesYesNo Clipboard
KBibTeXYesNoYesNoNo PDF, PS
MendeleyYesYes [lower-alpha 8] YesYesYes Clipboard, embeddable HTML widget, RSS
PaperpileYesYesYesYesNo Clipboard
PapersYesNoNoNoNo PDF
PybliographerYes ?NoYesNoNo
refbaseYesYesYesYesYes Markdown, PDF, unAPI
RefDBYes ?YesYesNo DocBook, TEI
RefWorksYesNoYesYesNo DOC, ODT
WikindxYesYesYesNoYesMultiple via BibUtils plug-in
ZoteroYesPossible via plugin [28] YesPossible via plugins [29] Yes Clipboard

Word processor integration

Some reference management software include support for automatic embedding and (re)formatting of references in Word processor programs. This table lists this type of support for Microsoft Word, Pages, Apache OpenOffice / LibreOffice Writer, the LaTeX editors Kile and LyX, and Google Docs. Other programs are able to scan RTF or other textual formats for inserted placeholders which are subsequently formatted. Most reference management programs support copy/paste or drag-and-drop of references into any editor, but this is not meant here.

SoftwareWord for WindowsWord for MacWord OnlinePagesApache OpenOffice / LibreOfficeKile/LyXGoogle DocsRTF scan [lower-alpha 9] Other
BebopNoNoNoNoNoNoNoNoNone
BibBaseNoNoNoNoNoNoNoNoNone
BibDeskNoNoNoNoNoYesNoYes User-created scripts
BibSonomyNoNoNoNoNoNoNoNoNone
BookendsYesYesNoYesYesNoNoYes Mellel, Nisus
CitaviYesYesNoNoOnly versions prior to 6.0Yes [30] NoOnly versions prior to 6.0LaTeX editors Texmaker, TeXnicCenter, TeXstudio, TeXworks, WinEdt, WinShell
EndNoteYesYesNoYesNo [31] NoNoYesNo
JabRefYes [32]  ? ? ?Yes [33] YesNo ? Emacs, Texmaker, TeXstudio, Vim, WinEdt
KBibTeXNo ? ? ?NoYesNo ?None
MendeleyYesPartial [lower-alpha 10] Yes [34] NoYesNoNo ? NeoOffice
PaperpileYesYesNoNoNoNoYesNoNo
PapersYesYesYes [35] Yes [36] YesNoYesNo Manuscripts app, Scrivener, Ulysses
PybliographerNo ? ? ?YesYesNo ?None
refbaseNo ? ? ?Yes [37] NoNoYes PIRA, MediaWiki, SPIP
RefDBNo ? ? ?NoNoNoNoNone
RefWorksYesYesNoNoNoNoYesYesNone
WikindxNoNoNoNoNoNoNoNoIntegrated WYSIWYG word processor (HTML and RTF output)
ZoteroYesYesNoNoYes(with LyZ) [38] YesYesVarious [39]

Database connectivity

This table lists the academic databases and search engines which reference managers can import from. In some cases, a search and retrieval can be conducted directly in the reference manager. In others, a bookmarklet or Firefox extension will allow a site to be scraped.

Software ArXiv CiteSeer IEEE Xplore PubMed Unpaywall [lower-alpha 11] Other
BebopNoNoNoNoNoNo
BibBaseNoNoNoNoNo DBLP, Zotero, BibSonomy, Mendeley
BibDeskYesYesNoYesNo ACM portal, Jstor, DBLP, Google Scholar, Web of Science, any Z39.50 or Entrez, and others
BibSonomyYesYesYesYesNoVarious [40]
BookendsYesNoNoYesNoWeb of Science, Amazon, Google Scholar, Z39.50
CitaviYesYesYesYesNo WorldCat/OCLC, Ovid, EBSCO, ProQuest, Web of Science, Z39.50 (4500+ online resources), SRU. Further catalogs are added upon request. Browser plugins (Firefox, Chrome, Internet Explorer) support DOI lookup, ISBN lookup, PubMed ID lookup, PMCID lookup, arXiv ID lookup, COinS and import from Wikipedia.
EndNoteYesNoYesYesNoVarious, [41] any Z39.50
JabRefYesYesYesYesYes [42] ACM Portal, CrossRef, DBLP, DOAJ, DOI, GVK, Google Scholar, INSPIRE-HEP, Medline, MathSciNet, SAO/NASA Astrophysics Data System, Springer, and zbMATH
KBibTeXYesYesYesYesNo BibSonomy, CiteBase, CSB, DBLP, Google Scholar, ScienceDirect, INSPIRE-HEP, Z MATH, Z39.50
MendeleyYesYesYesYesNoVarious [43]
PaperpileYesNoYesYesYes Google Scholar, INSPIRE-HEP, ACM portal, Jstor, Web of Science
PapersYesNoYesYesNoMicrosoft Academic, Google Scholar
PybliographerNoNoNoYesNoNone
refbaseYesNoNoYesNo DOI lookup
RefDBYesNoNoYesNoAny Z39.50
RefWorksNoNoNoYesNoVarious
WikindxNoNoNoYesNoMetadata for Google Scholar Indexing
ZoteroYesYesYesYesYes [44] Various [45]

Password "protection" and network versions

Some reference managers provide network functionality (N/A, not available, means the product has no networking, while "No" indicates it does but lacks an implemented feature). The Lightweight Directory Access Protocol (LDAP) is an open, vendor-neutral, industry standard application protocol for accessing and maintaining distributed directory services over an Internet Protocol (IP) network. [46]

SoftwarePasswordedLDAPNetworking
User-specific permissions [lower-alpha 12] Simultaneous write access
BebopNo ?
BibBase ?
BibDeskYes ?NoNo
BibSonomyYes ?YesYes
Bookends ? ? ? ?
CitaviYes [lower-alpha 13]  ?YesYes
EndNoteYes ?No [lower-alpha 14] No [lower-alpha 14]
JabRefNo ?NoPartial
KBibTeXNo ?
MendeleyYes [lower-alpha 15]  ?YesYes
PaperpileYes [lower-alpha 16]  ?YesYes
PapersYes ?YesYes [47]
Pybliographer ? ? ? ?
refbaseYes ?YesYes
RefDBYes ?YesYes
RefWorksYes ? ?Yes
WikindxYesYesYesYes
ZoteroYes [lower-alpha 17]  ?YesYes

Discontinued software

SoftwareDeveloperFirst public releaseLatest stable release dateLatest stable versionCost (USD) Free software LicenseNotes
Biblioscape CG Information19972015-06-2210.0.3.6 US$79-299 [lower-alpha 1] No Proprietary ODBC; web access in Pro ed; optional client/server; discontinued?
Bibus Bibus developers2004-06-03Discontinued1.5.1FreeYes GNU GPL
CiteULike Oversity Limited2004-11Shut down on 2019-03-30 [48] FreeNo Proprietary [lower-alpha 18] Centrally hosted website
colwiz colwiz Ltd20112016-05-09Free / Online storage free up to 3 GB / Additional storage space availableNo Proprietary Now combined with wizdom.ai
Qiqqa Qiqqa2010-042020-10-04v80FreeYes GNU GPL From end 2020, Open Source
Reference Manager Thomson Reuters 1984201012.0.3Not for sale anymore, sales ceased December 31, 2015No Proprietary Network version; built-in web publishing tool; discontinued
Referencer Referencer developers2008-03-15Discontinued1.2.2FreeYes GNU GPL BibTeX front-end
RefME RefME2014Shut down in 2017FreeNo Proprietary Web, iOS and Android; Chrome and Safari Extensions available; discontinued
SciRef Scientific Programs20122020-07-301.6.2 US$38.90 / Free trial versionNo Proprietary
SenteThird Street Software, Inc.2004Shut down in 20176.7.9 US$60–80 [lower-alpha 1] / Free for libraries up to 100 refsNo Proprietary Desktop and iPad, centralized backup/synching; discontinued
WizFolio WizPatent2008-06Shut down in 2017AvataraUS$25 / Free Basic versionNo Proprietary Centrally hosted website; discontinued

Notes

  1. 1 2 3 4 MSRP for full version, usually with physical media. Discounted downloads and academic discounts might be available. More expensive workgroup/server/librarian versions may be available.
  2. Price depends on affiliation (discounted price for students and members of academic, governmental, and nonprofit organizations), edition (Citavi for Windows for single users and teams with cloud storage, Citavi for DBServer for teams with intranet storage, Citavi Web with cloud storage), and, in the case of DBServer, on the license type (per seat license vs. concurrent license): "Products". www.citavi.com. Archived from the original on 2015-04-27.
  3. 1 2 The GUI requires gnome-python, which isn't available for Windows or macOS.
  4. 1 2 3 4 5 6 Supported through the bibutils plugin.
  5. 1 2 Zotero can import references directly from the database after which this format is named, although it cannot read the format itself.
  6. This refers to the direct output of raw LaTeX (often in a format similar to the BibTeX-generated .bbl files). Many programs can export BibTeX (see above table), which can then be processed into LaTeX. [27]
  7. Database can be exported as a whole in BibTeX format. Text (i.e. thoughts, comments, and quotations) can be fed into a number of TeX editors in LaTeX code or UTF-8.
  8. Database can be exported as a whole in BibTeX format.Insert citations via citation key generated by Mendeley.
  9. Can reformat references in a properly saved RTF document, allowing limited use in OpenOffice.org Writer, StarOffice, FrameMaker, Microsoft Works, WordPad, WordPerfect, Google Docs and others.
  10. Requires the Mendeley Reference Manager desktop app for Mac open to choose references.
  11. Includes all the other databases and open access repositories.
  12. Most databases allow one to create different user accounts to store records. Some further allow you to specify permissions (granting and denying some users the rights to edit or read some or all of your records). This column describes the latter.
  13. Storage in Citavi cloud or, with special license, in Microsoft SQL Server in intranet.
  14. 1 2 via EndNote basic (cloud based)
  15. via Mendeley Web.
  16. Uses Google Account.
  17. via zotero.org.
  18. A developer kit is available. The community is invited to create plugins to access data off databases.

Related Research Articles

<span class="mw-page-title-main">LyX</span>

LyX is an open source, graphical user interface document processor based on the LaTeX typesetting system. Unlike most word processors, which follow the WYSIWYG paradigm, LyX has a WYSIWYM approach, where what shows up on the screen roughly depicts the semantic structure of the page and is only an approximation of the document produced by TeX.

<span class="mw-page-title-main">BibTeX</span> Reference management software for formatting lists of references

BibTeX is both a bibliographic flat-file database file format and a software program for processing these files to produce lists of references (citations). The BibTeX file format is a widely used standard with broad support by reference management software.

CiteULike was a web service which allowed users to save and share citations to academic papers. Based on the principle of social bookmarking, the site worked to promote and to develop the sharing of scientific references amongst researchers. In the same way that it is possible to catalog web pages or photographs, scientists could share citation information using CiteULike. Richard Cameron developed CiteULike in November 2004 and in 2006 Oversity Ltd. was established to develop and support CiteULike. In February 2019, CiteULike announced that it would be ceasing operations as of March 30, 2019.

EndNote is a commercial reference management software package, used to manage bibliographies and references when writing essays, reports and articles. EndNote was written by Richard Niles, and ownership changed hands several times since it was launched in 1989 by Niles & Associates: in 2000 it was acquired by Institute for Scientific Information’s ResearchSoft Division, part of Thomson Corporation, and in 2016 by Clarivate. EndNote's main competitors are Mendeley and Zotero. Unlike Mendeley and Zotero, EndNote is neither free-to-use nor offers a freemium model.

refbase

refbase is web-based institutional repository and reference management software which is often used for self-archiving. refbase is licensed under the GPL and written in PHP and uses a MySQL backend.

RIS is a standardized tag format developed by Research Information Systems, Incorporated to enable citation programs to exchange data. It is supported by a number of reference managers. Many digital libraries, like IEEE Xplore, Scopus, the ACM Portal, Scopemed, ScienceDirect, SpringerLink, Rayyan, Accordance Bible Software, and online library catalogs can export citations in this format. Citation management applications can export and import citations in this format.

<span class="mw-page-title-main">Zotero</span> Open-source reference management software

Zotero is free and open-source reference management software to manage bibliographic data and related research materials, such as PDF and ePUB files. Features include web browser integration, online syncing, generation of in-text citations, footnotes, and bibliographies, integrated PDF, ePUB and HTML readers with annotation capabilities, and a note editor, as well as integration with the word processors Microsoft Word, LibreOffice Writer, and Google Docs. It was originally created at the Center for History and New Media at George Mason University and, as of 2021, is developed by the non-profit Corporation for Digital Scholarship.

ContextObjects in Spans (COinS) is a method to embed bibliographic metadata in the HTML code of web pages. This allows bibliographic software to publish machine-readable bibliographic items and client reference management software to retrieve bibliographic metadata. The metadata can also be sent to an OpenURL resolver. This allows, for instance, searching for a copy of a book at a specific library.

The Citation Style Language (CSL) is an open XML file format that describes schema for the formatting of citations and bibliographies. Reference management programs using CSL include Zotero, Mendeley and Papers. The Pandoc lightweight document conversion system also supports citations in CSL, YAML, and JSON formats and can render these using any of the CSL styles listed in the Zotero Style Repository.

<span class="mw-page-title-main">BibDesk</span> Reference management software

BibDesk is an open-source reference management software package for macOS, used to manage bibliographies and references when writing essays and articles. It can also be used to organize and maintain a library of documents in PDF format and other formats. It is primarily a BibTeX front-end for use with LaTeX, but also offers external bibliographic database connectivity for importing, a variety of means for exporting, and capability for linking to local documents and automatically filing local documents. It takes advantage of many macOS features such as AppleScript and Spotlight.

CiteProc is the generic name for programs that produce formatted bibliographies and citations based on the metadata of the cited objects and the formatting instructions provided by Citation Style Language (CSL) styles. The first CiteProc implementation used XSLT 2.0, but implementations have been written for other programming languages, including JavaScript, Java, Haskell, PHP, Python, Ruby and Emacs Lisp.

<span class="mw-page-title-main">Mendeley</span> Reference management software

Mendeley is a reference manager software founded in 2007 by PhD students Paul Foeckler, Victor Henning, Jan Reichelt and acquired by the Dutch academic publishing company Elsevier in 2013. It is used to manage and share research papers and to generate bibliographies for scholarly articles.

WIKINDX is a free bibliographic and quotations/notes management and article authoring system designed either for single use and multi-user collaborative use across the internet. WIKINDX falls within the category of reference management software, but also provides functionality to write notes and entire papers.

<span class="mw-page-title-main">Qiqqa</span> Reference management software

Qiqqa is a free and open-source software that allows researchers to work with thousands of PDFs. It combines PDF reference management tools, a citation manager, and a mind map brainstorming tool. It integrates with Microsoft Word XP, 2003, 2007 and 2010 and BibTeX/LaTeX to automatically produce citations and bibliographies in thousands of styles.

<span class="mw-page-title-main">Citavi</span> Software for reference management and knowledge organization

Citavi is a program for reference management and knowledge organization for Microsoft Windows published by Swiss Academic Software in Wädenswil, Switzerland. Citavi is very widely used in Germany, Austria, and Switzerland, with site licenses at most universities, many of which offer training sessions and settings files for Citavi.

<span class="mw-page-title-main">Zim (software)</span> Personal wiki software written in Python

Zim is a graphical text editor designed to maintain a collection of locally stored wiki-pages, a personal wiki. It works as a personal knowledge base and note-taking software application that operates on text files using markdown. Each wiki-page can contain things like text with simple formatting, links to other pages, attachments, and images. Additional plugins, such as an equation editor and spell-checker, are also available. The wiki-pages are stored in a folder structure in plain text files with wiki formatting. Zim can be used with the Getting Things Done method.

<span class="mw-page-title-main">BibBase</span>

BibBase is a free web-service for creating and maintaining publication pages. BibBase takes its input from a BibTex file or from DBLP, Zotero, BibSonomy, or Mendeley. It produces both HTML renderings, which can be embedded into an existing web page, as well as RSS feeds that allows others to subscribe to updates about new publications from the user.

Pandoc is a free-software document converter, widely used as a writing tool and as a basis for publishing workflows. It was created by John MacFarlane, a philosophy professor at the University of California, Berkeley.

<span class="mw-page-title-main">Paperpile</span>

Paperpile is a web-based commercial reference management software, with special emphasis on integration with Google Docs and Google Scholar. Parts of Paperpile are implemented as a Google Chrome browser extension. It was founded in 2012, and is produced by Paperpile LLC.

<span class="mw-page-title-main">Zettlr</span>

Zettlr is a free and open-source note-taking application that works with Markdown files. Files may be exported and imported from a variety of different formats using an integration with Pandoc, whilst integration with reference managers allows for insertion of citations into documents. Internal links may be created between notes, which can be visualised as a graph, enabling its use as a personal information management system or digital Zettelkasten. The name Zettlr is derived from the German word Zettel meaning 'note'.

References

  1. "dev.bibsonomy". BibSonomy.org. 2016-02-15. Retrieved 2016-02-15.
  2. "Update History | Sonny Software". Sonny Software. 2023-05-06. Archived from the original on 2017-11-12. Retrieved 2023-05-23.
  3. "Collaborating in a Team with Citavi for DBServer". Swiss Academic Software. 2018-02-20. Retrieved 2019-04-15.
  4. "Citavi – Organize your knowledge". Swiss Academic Software. 2018-02-20. Archived from the original on 2015-04-24. Retrieved 2018-02-20.
  5. A centrally-hosted website is available at refbase.net.
  6. "Zotero Changelog". Roy Rosenzweig Center for History and New Media. Retrieved 2022-07-18.
  7. 1 2 "Mendeley Refocusing Announcement". 11 March 2021.
  8. "Paperpile on the App Store". apps.apple.com. 9 June 2023.
  9. "Paperpile on Android". play.google.com.
  10. "Write-N-Cite Download Page". www.refworks.com. 2018-04-10. Retrieved 23 September 2018.
  11. "Zotero for mobile". www.zotero.org. Roy Rosenzweig Center for History and New Media. Retrieved 2023-04-04.
  12. "BibSonomy: Export". www.bibsonomy.org. Retrieved 2023-04-04.
  13. 1 2 3 "Output Styles". EndNote. Retrieved 2023-04-04.
  14. "Journal Abbreviations". Roy Rosenzweig Center for History and New Media. Retrieved June 19, 2015.
  15. Fenner, Martin (30 July 2013). "Citeproc YAML for bibliographies". Gobbledygook. Retrieved 2021-01-15.
  16. "Import Filters". EndNote. Retrieved 2023-04-04.
  17. "Products". RefWorks. Retrieved 2012-07-24.
  18. "Zotero supported data formats". www.zotero.org. Roy Rosenzweig Center for History and New Media. Retrieved 2014-02-08.
  19. 1 2 "BibDesk Export Templates". sourceforge.net. Or: "Using BibDesk Citations in Editors and Word Processors". sourceforge.net. Retrieved 2023-04-04.
  20. 1 2 3 4 "pandoc 2.11 (2020-10-11)". pandoc.org. Retrieved 2023-04-04. Added bibtex, biblatex as input formats. This allows pandoc to convert between BibLaTeX and BibTeX and other bibliography formats, and to generate formatted versions of BibTeX/BibLaTeX bibliographies (e.g., pandoc -f biblatex --citeproc pl.bib -o pl.pdf).
  21. 1 2 "Citavi". www.citavi.com. Retrieved 2023-04-04. Citavi offers over 10,000 citation styles. Other styles can be requested and are centrally corrected; and any BibTeX style can be used with LaTeX.
  22. 1 2 3 4 5 6 7 8 Over 10,000 CSL style files are available at: "Zotero Style Repository". www.zotero.org. Or: "citation-style-language/styles: Official repository for Citation Style Language (CSL) citation styles". GitHub . Retrieved 2023-04-04. CSL styles can be edited or requested.
  23. "What citation styles are available in SmartCite?". support.papersapp.com. And: "Citekey management". support.papersapp.com. Retrieved 2023-04-04.
  24. "RefDB Examples: Style Gallery". refdb.sourceforge.net. Retrieved 2023-04-04.
  25. "Managing Citation Styles – Ex Libris Knowledge Center". knowledge.exlibrisgroup.com. 31 July 2018. Retrieved 2023-04-04. See also: "Output Style List". www.refworks.com. Archived from the original on 2019-11-21. Retrieved 2023-04-04.
  26. "LaTeX and BibTeX – Citation Management and Writing Tools – LibGuides at MIT Libraries". libguides.mit.edu. Retrieved 2023-04-04.
  27. "Creating a Publication with TeX". Swiss Academic Software. 2015-10-27. Retrieved 2015-10-27.
  28. "Better BibTeX". GitHub . Retrieved September 18, 2017.
  29. "Plugins for Zotero". www.zotero.org. Roy Rosenzweig Center for History and New Media. Retrieved June 16, 2015.
  30. Detailed setup guide "Citavi + LyX" [ permanent dead link ]. Citavi. Retrieved 2014-07-10.
  31. "EndNote X8 with LibreOffice – Clarivate Community". 2017-10-24. Retrieved 2017-11-11.
  32. See JabRef FAQ: Field Mapping between MS-Office and JabRef.
  33. See JabRef FAQ: OpenOffice/LibreOffice integration.
  34. Requires the Mendeley Cite Add-in
  35. Requires the SmartCite for Papers Add-in
  36. Can be used with SmartCite for Citekeys
  37. Refbase can create a spreadsheet for import into an OO.o database to use the native OO.o bibliography tool. Refbase's MySQL database can additionally be used directly by OO.o .
  38. The LyZ extension integrates Zotero with Lyx/Kile
  39. "Word Processor and Writing Integration". www.zotero.org. Roy Rosenzweig Center for History and New Media. Retrieved 2023-04-04.
  40. "Scraper info". BibSonomy. Retrieved 2012-07-24.
  41. "Connection files". EndNote. Retrieved 2023-04-04.
  42. "Unpaywall". docs.jabref.org. Retrieved Jun 3, 2022.
  43. "Get started with Mendeley Web Importer". www.mendeley.com. Retrieved 2023-04-04.
  44. "Improved PDF retrieval with Unpaywall integration". Zotero Blog. 2018-10-08. Retrieved 2020-04-25.
  45. "Zotero Translators (documentation)". Zotero.org. 2012-03-15. Retrieved 2012-07-24.
  46. "Network Working Group RFC 4511". IETF.org. 2006-06-01. Retrieved 2014-04-04.
  47. via Shared library
  48. "CiteULike is closing down". CiteULike. Archived from the original on 10 March 2019. Retrieved 14 March 2019.

Further reading