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The Unified Medical Language System (UMLS) is a compendium of many controlled vocabularies in the biomedical sciences. It provides a mapping structure among these vocabularies and thus allows one to translate among the various terminology systems; it may also be viewed as a comprehensive thesaurus and ontology of biomedical concepts. UMLS further provides facilities for natural language processing. It is intended to be used mainly by developers of systems in medical informatics.
Barry Smith is an academic working in the fields of ontology and biomedical informatics. Smith is the author of more than 700 scientific publications, including 15 authored or edited books, and he is one of the most widely cited contemporary philosophers.
The Open Biological and Biomedical Ontologies (OBO) Foundry is a group of people dedicated to build and maintain ontologies related to the life sciences. The OBO Foundry establishes a set of principles for ontology development for creating a suite of interoperable reference ontologies in the biomedical domain. Currently, there are more than a hundred ontologies that follow the OBO Foundry principles.
Protégé is a free, open source ontology editor and a knowledge management system. The Protégé meta-tool was first built by Mark Musen in 1987 and has since been developed by a team at Stanford University. The software is the most popular and widely used ontology editor in the world.
Alan L. Rector is a Professor of Medical Informatics in the Department of Computer Science at the University of Manchester in the UK.
Edward ("Ted") Hance Shortliffe is a Canadian-born American biomedical informatician, physician, and computer scientist. Shortliffe is a pioneer in the use of artificial intelligence in medicine. He was the principal developer of the clinical expert system MYCIN, one of the first rule-based artificial intelligence expert systems, which obtained clinical data interactively from a physician user and was used to diagnose and recommend treatment for severe infections. While never used in practice, its performance was shown to be comparable to and sometimes more accurate than that of Stanford infectious disease faculty. This spurred the development of a wide range of activity in the development of rule-based expert systems, knowledge representation, belief nets and other areas, and its design greatly influenced the subsequent development of computing in medicine.
Russ Biagio Altman is an American professor of bioengineering, genetics, medicine, and biomedical data science and past chairman of the bioengineering department at Stanford University.
Yves A. Lussier is a physician-scientist conducting research in Precision medicine, Translational bioinformatics and Personal Genomics. As a co-founder of Purkinje, he pioneered the commercial use of controlled medical vocabulary organized as directed semantic networks in electronic medical records, as well as Pen computing for clinicians.
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Timothy J. Broderick, F.A.C.S., is Professor of Surgery and Biomedical Engineering at the University of Cincinnati, where he has served on the faculty since 2003. He also serves as Chief of the Division of Gastrointestinal and Endocrine Surgery and is Director of the Advanced Center for Telemedicine and Surgical Innovation (ACTSI). He has flown on the NASA KC-135 parabolic laboratory and dived in the NASA Extreme Environment Mission Operations (NEEMO) program to develop advanced surgical technologies for long duration space flight.
Suzanna (Suzi) E. Lewis is a scientist and Principal investigator at the Berkeley Bioinformatics Open-source Project based at Lawrence Berkeley National Laboratory. Lewis leads the development of open standards and software for genome annotation and ontologies.
Carol Friedman is a scientist and biomedical informatician. She is among the pioneers the use of expert systems in medical language processing and the explicit medical concept representation underpinning the use of entity–attribute–value modeling underpinning electronic medical records.
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Derek H. Sleeman is Emeritus Professor of Computing Science at the University of Aberdeen, Scotland, and Visiting Professor, in the School of Medicine and the University of Glasgow. He is a Fellow of the Royal Society of Edinburgh (1992), the British Computer Society (1995), and the European AI Society (2004).
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Michel Justin Dumontier is a Distinguished Professor of Data Science at Maastricht University. His research focuses on methods to represent knowledge on the web with applications for drug discovery and personalized medicine. He was previously an Associate Professor of Medicine at the Stanford University School of Medicine and an Associate Professor of Bioinformatics at Carleton University. He is best known for his work in biomedical ontologies, linked data and biomedical knowledge discovery. He has taught courses on biochemistry, bioinformatics, computational systems biology, and translational medicine. His research has been funded by Natural Sciences and Engineering Research Council, Canada Foundation for Innovation, Mitacs Canada, the Ontario Ministry of Research, Innovation and Science, CANARIE, and the US National Institutes of Health. Dumontier has an h-index of over 30 and has authored over 125 scientific publications in journals and conferences. He lives in Maastricht with his wife Tifany Irene Leung and their lionhead rabbit Storm.
Yuval Shahar, M.D., Ph.D., is an Israel professor, physician, researcher and computer scientist
Natalya Fridman Noy is a Russian-born American computer scientist who works at Google Research in Mountain View, CA. She is best known for her work with the Protégé ontology editor and the Prompt alignment tool, for which she and co-author Mark Musen won the classic paper award from the Association for the Advancement of Artificial Intelligence (AAAI) in 2018. Noy served as president of the Semantic Web Sciences Association in 2012–2017, and her Ontology 101 Tutorial is one of the most cited and downloaded documents on the semantic web.
References
- ↑ "Mark Musen". Stanford HAI. Retrieved 2022-02-05.
- 1 2 3 "Mark Musen's Profile | Stanford Profiles". profiles.stanford.edu. Retrieved 2022-02-05.
- ↑ Gennari, John H.; Musen, Mark A.; Fergerson, Ray W.; Grosso, William E.; Crubézy, Monica; Eriksson, Henrik; Noy, Natalya F.; Tu, Samson W. (2003-01-01). "The evolution of Protégé: an environment for knowledge-based systems development". International Journal of Human-Computer Studies. 58 (1): 89–123. doi:10.1016/S1071-5819(02)00127-1. ISSN 1071-5819.
- ↑ Rubin, Daniel L.; Noy, Natalya F.; Musen, Mark A. (August 9, 2007). "Protégé: A Tool for Managing and Using Terminology in Radiology Applications". Journal of Digital Imaging. 20 (Suppl 1): 34–46. doi:10.1007/s10278-007-9065-0. ISSN 0897-1889. PMC 2039856 . PMID 17687607.
