Nucleophile

Last updated April 19, 2024

A hydroxide ion acting as a nucleophile in an S_N2 reaction, converting a haloalkane into an alcohol

In chemistry, a nucleophile is a chemical species that forms bonds by donating an electron pair. All molecules and ions with a free pair of electrons or at least one pi bond can act as nucleophiles. Because nucleophiles donate electrons, they are Lewis bases.

Nucleophilic describes the affinity of a nucleophile to bond with positively charged atomic nuclei. Nucleophilicity, sometimes referred to as nucleophile strength, refers to a substance's nucleophilic character and is often used to compare the affinity of atoms. Neutral nucleophilic reactions with solvents such as alcohols and water are named solvolysis. Nucleophiles may take part in nucleophilic substitution, whereby a nucleophile becomes attracted to a full or partial positive charge, and nucleophilic addition. Nucleophilicity is closely related to basicity. The difference between the two is, that basicity is a thermodynamic property (i.e. relates to an equilibrium state), but nucleophilicity is a kinetic property, which relates to rates of certain chemical reactions.^[1]

History

The terms nucleophile and electrophile were introduced by Christopher Kelk Ingold in 1933,^[2] replacing the terms anionoid and cationoid proposed earlier by A. J. Lapworth in 1925.^[3] The word nucleophile is derived from nucleus and the Greek word φιλος, philos, meaning friend.

Properties

In general, in a group across the periodic table, the more basic the ion (the higher the pK_a of the conjugate acid) the more reactive it is as a nucleophile. Within a series of nucleophiles with the same attacking element (e.g. oxygen), the order of nucleophilicity will follow basicity. Sulfur is in general a better nucleophile than oxygen.^{[ citation needed ]}

Nucleophilicity

Many schemes attempting to quantify relative nucleophilic strength have been devised. The following empirical data have been obtained by measuring reaction rates for many reactions involving many nucleophiles and electrophiles. Nucleophiles displaying the so-called alpha effect are usually omitted in this type of treatment.^{[ citation needed ]}

Swain–Scott equation

The first such attempt is found in the Swain–Scott equation^[4]^[5] derived in 1953:

\log _{10}\left({\frac {k}{k_{0}}}\right)=sn

This free-energy relationship relates the pseudo first order reaction rate constant (in water at 25 °C), k, of a reaction, normalized to the reaction rate, k₀, of a standard reaction with water as the nucleophile, to a nucleophilic constant n for a given nucleophile and a substrate constant s that depends on the sensitivity of a substrate to nucleophilic attack (defined as 1 for methyl bromide).

This treatment results in the following values for typical nucleophilic anions: acetate 2.7, chloride 3.0, azide 4.0, hydroxide 4.2, aniline 4.5, iodide 5.0, and thiosulfate 6.4. Typical substrate constants are 0.66 for ethyl tosylate, 0.77 for β-propiolactone, 1.00 for 2,3-epoxypropanol, 0.87 for benzyl chloride, and 1.43 for benzoyl chloride.

The equation predicts that, in a nucleophilic displacement on benzyl chloride, the azide anion reacts 3000 times faster than water.

Ritchie equation

The Ritchie equation, derived in 1972, is another free-energy relationship:^[6]^[7]^[8]

\log _{10}\left({\frac {k}{k_{0}}}\right)=N^{+}

where N⁺ is the nucleophile dependent parameter and k₀ the reaction rate constant for water. In this equation, a substrate-dependent parameter like s in the Swain–Scott equation is absent. The equation states that two nucleophiles react with the same relative reactivity regardless of the nature of the electrophile, which is in violation of the reactivity–selectivity principle. For this reason, this equation is also called the constant selectivity relationship.

In the original publication the data were obtained by reactions of selected nucleophiles with selected electrophilic carbocations such as tropylium or diazonium cations:

or (not displayed) ions based on malachite green. Many other reaction types have since been described.

Typical Ritchie N⁺ values (in methanol) are: 0.5 for methanol, 5.9 for the cyanide anion, 7.5 for the methoxide anion, 8.5 for the azide anion, and 10.7 for the thiophenol anion. The values for the relative cation reactivities are −0.4 for the malachite green cation, +2.6 for the benzenediazonium cation, and +4.5 for the tropylium cation.

Mayr–Patz equation

In the Mayr–Patz equation (1994):^[9]

\log(k)=s(N+E)

The second order reaction rate constant k at 20 °C for a reaction is related to a nucleophilicity parameter N, an electrophilicity parameter E, and a nucleophile-dependent slope parameter s. The constant s is defined as 1 with 2-methyl-1-pentene as the nucleophile.

Many of the constants have been derived from reaction of so-called benzhydrylium ions as the electrophiles:^[10]

and a diverse collection of π-nucleophiles:

.

Typical E values are +6.2 for R = chlorine, +5.90 for R = hydrogen, 0 for R = methoxy and −7.02 for R = dimethylamine.

Typical N values with s in parentheses are −4.47 (1.32) for electrophilic aromatic substitution to toluene (1), −0.41 (1.12) for electrophilic addition to 1-phenyl-2-propene (2), and 0.96 (1) for addition to 2-methyl-1-pentene (3), −0.13 (1.21) for reaction with triphenylallylsilane (4), 3.61 (1.11) for reaction with 2-methylfuran (5), +7.48 (0.89) for reaction with isobutenyltributylstannane (6) and +13.36 (0.81) for reaction with the enamine 7.^[11]

The range of organic reactions also include SN2 reactions:^[12]

With E = −9.15 for the S-methyldibenzothiophenium ion, typical nucleophile values N (s) are 15.63 (0.64) for piperidine, 10.49 (0.68) for methoxide, and 5.20 (0.89) for water. In short, nucleophilicities towards sp₂ or sp₃ centers follow the same pattern.

Unified equation

In an effort to unify the above described equations the Mayr equation is rewritten as:^[12]

$\log(k)=s_{E}s_{N}(N+E)$

with s_E the electrophile-dependent slope parameter and s_N the nucleophile-dependent slope parameter. This equation can be rewritten in several ways:

with s_E = 1 for carbocations this equation is equal to the original Mayr–Patz equation of 1994,
with s_N = 0.6 for most n nucleophiles the equation becomes

\log(k)=0.6s_{E}N+0.6s_{E}E

or the original Scott–Swain equation written as:

\log(k)=\log(k_{0})+s_{E}N

with s_E = 1 for carbocations and s_N = 0.6 the equation becomes:

\log(k)=0.6N+0.6E

or the original Ritchie equation written as:

\log(k)-\log(k_{0})=N^{+}

Types

Examples of nucleophiles are anions such as Cl⁻, or a compound with a lone pair of electrons such as NH₃ (ammonia) and PR₃.^{[ citation needed ]}

In the example below, the oxygen of the hydroxide ion donates an electron pair to form a new chemical bond with the carbon at the end of the bromopropane molecule. The bond between the carbon and the bromine then undergoes heterolytic fission, with the bromine atom taking the donated electron and becoming the bromide ion (Br⁻), because a S_N2 reaction occurs by backside attack. This means that the hydroxide ion attacks the carbon atom from the other side, exactly opposite the bromine ion. Because of this backside attack, S_N2 reactions result in a inversion of the configuration of the electrophile. If the electrophile is chiral, it typically maintains its chirality, though the S_N2 product's absolute configuration is flipped as compared to that of the original electrophile.^{[ citation needed ]}

Ambident Nucleophile

An ambident nucleophile is one that can attack from two or more places, resulting in two or more products. For example, the thiocyanate ion (SCN⁻) may attack from either the sulfur or the nitrogen. For this reason, the S_N2 reaction of an alkyl halide with SCN⁻ often leads to a mixture of an alkyl thiocyanate (R-SCN) and an alkyl isothiocyanate (R-NCS). Similar considerations apply in the Kolbe nitrile synthesis.^{[ citation needed ]}

Halogens

While the halogens are not nucleophilic in their diatomic form (e.g. I₂ is not a nucleophile), their anions are good nucleophiles. In polar, protic solvents, F⁻ is the weakest nucleophile, and I⁻ the strongest; this order is reversed in polar, aprotic solvents.^[13]

Carbon

Carbon nucleophiles are often organometallic reagents such as those found in the Grignard reaction, Blaise reaction, Reformatsky reaction, and Barbier reaction or reactions involving organolithium reagents and acetylides. These reagents are often used to perform nucleophilic additions.^{[ citation needed ]}

Enols are also carbon nucleophiles. The formation of an enol is catalyzed by acid or base. Enols are ambident nucleophiles, but, in general, nucleophilic at the alpha carbon atom. Enols are commonly used in condensation reactions, including the Claisen condensation and the aldol condensation reactions.^{[ citation needed ]}

Oxygen

Examples of oxygen nucleophiles are water (H₂O), hydroxide anion, alcohols, alkoxide anions, hydrogen peroxide, and carboxylate anions. Nucleophilic attack does not take place during intermolecular hydrogen bonding.

Sulfur

Of sulfur nucleophiles, hydrogen sulfide and its salts, thiols (RSH), thiolate anions (RS⁻), anions of thiolcarboxylic acids (RC(O)-S⁻), and anions of dithiocarbonates (RO-C(S)-S⁻) and dithiocarbamates (R₂N-C(S)-S⁻) are used most often.

In general, sulfur is very nucleophilic because of its large size, which makes it readily polarizable, and its lone pairs of electrons are readily accessible.

Nitrogen

Nitrogen nucleophiles include ammonia, azide, amines, nitrites, hydroxylamine, hydrazine, carbazide, phenylhydrazine, semicarbazide, and amide.

Metal centers

Although metal centers (e.g., Li⁺, Zn²⁺, Sc³⁺, etc.) are most commonly cationic and electrophilic (Lewis acidic) in nature, certain metal centers (particularly ones in a low oxidation state and/or carrying a negative charge) are among the strongest recorded nucleophiles and are sometimes referred to as "supernucleophiles." For instance, using methyl iodide as the reference electrophile, Ph₃Sn^– is about 10000 times more nucleophilic than I^–, while the Co(I) form of vitamin B₁₂ (vitamin B_12s) is about 10⁷ times more nucleophilic.^[14] Other supernucleophilic metal centers include low oxidation state carbonyl metalate anions (e.g., CpFe(CO)₂^–).^[15]

Examples

The following table shows the nucleophilicity of some molecules with methanol as the solvent:^[16]

Relative nucleophilicity	Molecules
Very Good	I⁻, HS⁻, RS⁻
Good	Br⁻, OH⁻, RO⁻, CN⁻, N₃⁻
Fair	NH₃, Cl⁻, F⁻, RCO₂⁻
Weak	H₂O, ROH
Very Weak	RCO₂H

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References

↑ Nucleophilicity—Periodic Trends and Connection to Basicity. Einar Uggerud. https://doi.org/10.1002/chem.200500639
↑ Ingold, C. K. (1933). "266. Significance of tautomerism and of the reactions of aromatic compounds in the electronic theory of organic reactions". Journal of the Chemical Society (Resumed): 1120. doi:10.1039/jr9330001120.
↑ Lapworth, A. (1925). "Replaceability of Halogen Atoms by Hydrogen Atoms". Nature . 115: 625.
↑ Quantitative Correlation of Relative Rates. Comparison of Hydroxide Ion with Other Nucleophilic Reagents toward Alkyl Halides, Esters, Epoxides and Acyl Halides C. Gardner Swain, Carleton B. Scott J. Am. Chem. Soc.; 1953; 75(1); 141-147. Abstract
↑ "Swain–Scott equation". The IUPAC Compendium of Chemical Terminology. 2014. doi: 10.1351/goldbook.S06201 .
↑ "Ritchie equation". The IUPAC Compendium of Chemical Terminology. 2014. doi: 10.1351/goldbook.R05402 .
↑ Nucleophilic reactivities toward cations Calvin D. Ritchie Acc. Chem. Res.; 1972; 5(10); 348-354. Abstract
↑ Cation–anion combination reactions. XIII. Correlation of the reactions of nucleophiles with esters Calvin D. Ritchie J. Am. Chem. Soc.; 1975; 97(5); 1170–1179. Abstract
↑ Mayr, Herbert; Patz, Matthias (1994). "Scales of Nucleophilicity and Electrophilicity: A System for Ordering Polar Organic and Organometallic Reactions". Angewandte Chemie International Edition in English. 33 (9): 938. doi:10.1002/anie.199409381.
↑ Mayr, Herbert; Bug, Thorsten; Gotta, Matthias F; Hering, Nicole; Irrgang, Bernhard; Janker, Brigitte; Kempf, Bernhard; Loos, Robert; Ofial, Armin R; Remennikov, Grigoriy; Schimmel, Holger (2001). "Reference Scales for the Characterization of Cationic Electrophiles and Neutral Nucleophiles". Journal of the American Chemical Society. 123 (39): 9500–12. doi:10.1021/ja010890y. PMID 11572670. S2CID 8392147.
↑ An internet database for reactivity parameters maintained by the Mayr group is available at http://www.cup.uni-muenchen.de/oc/mayr/
1 2 Phan, Thanh Binh; Breugst, Martin; Mayr, Herbert (2006). "Towards a General Scale of Nucleophilicity?". Angewandte Chemie International Edition. 45 (23): 3869–74. CiteSeerX 10.1.1.617.3287 . doi:10.1002/anie.200600542. PMID 16646102.
↑ Chem 2401 Supplementary Notes. Thompson, Alison and Pincock, James, Dalhousie University Chemistry Department
↑ Schrauzer, G. N.; Deutsch, E.; Windgassen, R. J. (April 1968). "The nucleophilicity of vitamin B(sub 12s)". Journal of the American Chemical Society. 90 (9): 2441–2442. doi:10.1021/ja01011a054. ISSN 0002-7863. PMID 5642073.
↑ Dessy, Raymond E.; Pohl, Rudolph L.; King, R. Bruce (November 1966). "Organometallic Electrochemistry. VII. 1 The Nucleophilicities of Metallic and Metalloidal Anions Derived from Metals of Groups IV, V, VI, VII, and VIII". Journal of the American Chemical Society. 88 (22): 5121–5124. doi:10.1021/ja00974a015. ISSN 0002-7863.
↑ Ian Hunt. "Chapter 8: Nucleophiles". chem.ucalgary.ca. University of Calgary. Retrieved 15 April 2024.

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[1] Nucleophilicity—Periodic Trends and Connection to Basicity. Einar Uggerud. https://doi.org/10.1002/chem.200500639

[2] Ingold, C. K. (1933). "266. Significance of tautomerism and of the reactions of aromatic compounds in the electronic theory of organic reactions". Journal of the Chemical Society (Resumed): 1120. doi:10.1039/jr9330001120.

[3] Lapworth, A. (1925). "Replaceability of Halogen Atoms by Hydrogen Atoms". Nature . 115: 625.

[4] Quantitative Correlation of Relative Rates. Comparison of Hydroxide Ion with Other Nucleophilic Reagents toward Alkyl Halides, Esters, Epoxides and Acyl Halides C. Gardner Swain, Carleton B. Scott J. Am. Chem. Soc.; 1953; 75(1); 141-147. Abstract

[5] "Swain–Scott equation". The IUPAC Compendium of Chemical Terminology. 2014. doi: 10.1351/goldbook.S06201 .

[6] "Ritchie equation". The IUPAC Compendium of Chemical Terminology. 2014. doi: 10.1351/goldbook.R05402 .

[7] Nucleophilic reactivities toward cations Calvin D. Ritchie Acc. Chem. Res.; 1972; 5(10); 348-354. Abstract

[8] Cation–anion combination reactions. XIII. Correlation of the reactions of nucleophiles with esters Calvin D. Ritchie J. Am. Chem. Soc.; 1975; 97(5); 1170–1179. Abstract

[9] Mayr, Herbert; Patz, Matthias (1994). "Scales of Nucleophilicity and Electrophilicity: A System for Ordering Polar Organic and Organometallic Reactions". Angewandte Chemie International Edition in English. 33 (9): 938. doi:10.1002/anie.199409381.

[10] Mayr, Herbert; Bug, Thorsten; Gotta, Matthias F; Hering, Nicole; Irrgang, Bernhard; Janker, Brigitte; Kempf, Bernhard; Loos, Robert; Ofial, Armin R; Remennikov, Grigoriy; Schimmel, Holger (2001). "Reference Scales for the Characterization of Cationic Electrophiles and Neutral Nucleophiles". Journal of the American Chemical Society. 123 (39): 9500–12. doi:10.1021/ja010890y. PMID 11572670. S2CID 8392147.

[11] An internet database for reactivity parameters maintained by the Mayr group is available at http://www.cup.uni-muenchen.de/oc/mayr/

[Mayr2006-12] 1 2 Phan, Thanh Binh; Breugst, Martin; Mayr, Herbert (2006). "Towards a General Scale of Nucleophilicity?". Angewandte Chemie International Edition. 45 (23): 3869–74. CiteSeerX 10.1.1.617.3287 . doi:10.1002/anie.200600542. PMID 16646102.

[13] Chem 2401 Supplementary Notes. Thompson, Alison and Pincock, James, Dalhousie University Chemistry Department

[14] Schrauzer, G. N.; Deutsch, E.; Windgassen, R. J. (April 1968). "The nucleophilicity of vitamin B(sub 12s)". Journal of the American Chemical Society. 90 (9): 2441–2442. doi:10.1021/ja01011a054. ISSN 0002-7863. PMID 5642073.

[15] Dessy, Raymond E.; Pohl, Rudolph L.; King, R. Bruce (November 1966). "Organometallic Electrochemistry. VII. 1 The Nucleophilicities of Metallic and Metalloidal Anions Derived from Metals of Groups IV, V, VI, VII, and VIII". Journal of the American Chemical Society. 88 (22): 5121–5124. doi:10.1021/ja00974a015. ISSN 0002-7863.

[16] Ian Hunt. "Chapter 8: Nucleophiles". chem.ucalgary.ca. University of Calgary. Retrieved 15 April 2024.

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