Sequence-defined polymer

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Sequence-defined polymer (Syn. sequence-specific polymer, sequence-ordered polymer) is a uniform macromolecule with an exact chain-length and a perfectly defined sequence of monomers. [1] [2] In other words, each monomer unit is at a defined position in the chain e.g. peptides, proteins, oligonucleotides. [3] Sequence-defined polymers constitute therefore a subclass of the field of sequence-controlled polymers. [1] [4]


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Polymer Substance composed of macromolecules with repeating structural units

A polymer is a substance or material consisting of very large molecules, or macromolecules, composed of many repeating subunits. Due to their broad spectrum of properties, both synthetic and natural polymers play essential and ubiquitous roles in everyday life. Polymers range from familiar synthetic plastics such as polystyrene to natural biopolymers such as DNA and proteins that are fundamental to biological structure and function. Polymers, both natural and synthetic, are created via polymerization of many small molecules, known as monomers. Their consequently large molecular mass, relative to small molecule compounds, produces unique physical properties including toughness, high elasticity, viscoelasticity, and a tendency to form amorphous and semicrystalline structures rather than crystals.

In polymer chemistry, polymerization, or polymerisation, is a process of reacting monomer molecules together in a chemical reaction to form polymer chains or three-dimensional networks. There are many forms of polymerization and different systems exist to categorize them.

Macromolecule A macromolecule is a large molecule that is composed of atoms.

A macromolecule is a very large molecule, such as a protein. They are composed of thousands of covalently bonded atoms. Many macromolecules are the polymerization of smaller molecules called monomers. The most common macromolecules in biochemistry are biopolymers and large non-polymeric molecules such as lipids and macrocycles. Synthetic fibers and experimental materials such as carbon nanotubes are also examples of macromolecules.

In polymer science, the backbone chain of a polymer is the longest series of covalently bonded atoms that together create the continuous chain of the molecule. This science is subdivided into the study of organic polymers, which consist of a carbon backbone, and inorganic polymers which have backbones containing only main group elements.

In polymer chemistry, ring-opening polymerization (ROP) is a form of chain-growth polymerization, in which the terminus of a polymer chain attacks cyclic monomers to form a longer polymer. The reactive center can be radical, anionic or cationic. Some cyclic monomers such as norbornene or cyclooctadiene can be polymerized to high molecular weight polymers by using metal catalysts. ROP is a versatile method for the synthesis of biopolymers.

Polythiophene

Polythiophenes (PTs) are polymerized thiophenes, a sulfur heterocycle. The parent PT is an insoluble colored solid with the formula (C4H2S)n. The rings are linked through the 2- and 5-positions. Poly(alkylthiophene)s have alkyl substituents at the 3- or 4-position(s). They are also colored solids, but tend to be soluble in organic solvents.

Copolymer

A copolymer is a polymer derived from more than one species of monomer. The polymerization of monomers into copolymers is called copolymerization. Copolymers obtained by copolymerization of two monomer species are sometimes called bipolymers. Those obtained from three and four monomers are called terpolymers and quaterpolymers, respectively.

A polymer brush is the name given to a surface coating consisting of polymers tethered to a surface. The brush may be either in a solvated state, where the tethered polymer layer consists of polymer and solvent, or in a melt state, where the tethered chains completely fill up the space available. These polymer layers can be tethered to flat substrates such as silicon wafers, or highly curved substrates such as nanoparticles. Also, polymers can be tethered in high density to another single polymer chain, although this arrangement is normally named a bottle brush. Additionally, there is a separate class of polyelectrolyte brushes, when the polymer chains themselves carry an electrostatic charge.

The term ‘polymer’ refers to large molecules whose structure is composed of multiple repeating units and the prefix ‘supra’ meaning ‘beyond the limits of’. Supramolecular polymers are a new category of polymers that can potentially be used for material applications beyond the limits of conventional polymers. By definition, supramolecular polymers are polymeric arrays of monomeric units that are connected by reversible and highly directional secondary interactions–that is, non-covalent bonds. These non-covalent interactions include van der Waals interaction, hydrogen bonding, π-π stacking, metal coordination, halogen bonding, chalcogen bonding, and host–guest interaction. The direction and strength of the interactions are precisely tuned so that the array of molecules behaves as a polymer in dilute and concentrated solution, as well as in the bulk.

Catalytic chain transfer (CCT) is a process that can be incorporated into radical polymerization to obtain greater control over the resulting products.

Living cationic polymerization is a living polymerization technique involving cationic propagating species. It enables the synthesis of very well defined polymers and of polymers with unusual architecture such as star polymers and block copolymers and living cationic polymerization is therefore as such of commercial and academic interest.

Polyfluorene

Polyfluorene is a polymer with formula (C
13
H
8
)
n
, consisting of fluorene units linked in a linear chain — specifically, at carbon atoms 2 and 7 in the standard fluorene numbering. It can also be described as a chain of benzene rings linked in para positions with an extra methylene bridge connecting every pair of rings.

Reversible deactivation radical polymerizations are members of the class of reversible deactivation polymerizations which exhibit much of the character of living polymerizations, but cannot be categorized as such as they are not without chain transfer or chain termination reactions. Several different names have been used in literature, which are:

Two-dimensional polymer

A two-dimensional polymer (2DP) is a sheet-like monomolecular macromolecule consisting of laterally connected repeat units with end groups along all edges. This recent definition of 2DP is based on Hermann Staudinger's polymer concept from the 1920s. According to this, covalent long chain molecules ("Makromoleküle") do exist and are composed of a sequence of linearly connected repeat units and end groups at both termini.

Sequence-controlled polymer

A sequence-controlled polymer is a macromolecule, in which the sequence of monomers is controlled to some degree. This control can be absolute but not necessarily. In other words, a sequence-controlled polymer can be uniform or non-uniform (Ð>1). For example, an alternating copolymer synthesized by radical polymerization is a sequence-controlled polymer, even if it is also a non-uniform polymer, in which chains have different chain-lengths and slightly different compositions. A biopolymer with a perfectly-defined primary structure is also a sequence-controlled polymer. However, in the case of uniform macromolecules, the term sequence-defined polymer can also be used.

Graft polymer

Graft polymers are segmented copolymers with a linear backbone of one composite and randomly distributed branches of another composite. The picture labeled "graft polymer" shows how grafted chains of species B are covalently bonded to polymer species A. Although the side chains are structurally distinct from the main chain, the individual grafted chains may be homopolymers or copolymers. Graft polymers have been synthesized for many decades and are especially used as impact resistant materials, thermoplastic elastomers, compatibilizers, or emulsifiers for the preparation of stable blends or alloys. One of the better-known examples of a graft polymer is high impact polystyrene, which consists of a polystyrene backbone with polybutadiene grafted chains.

Knotted polymers

Single Chain Cyclized/Knotted Polymers are a new class of polymer architecture with a general structure consisting of multiple intramolecular cyclization units within a single polymer chain. Such a structure was synthesized via the controlled polymerization of multivinyl monomers, which was first reported in Dr. Wenxin Wang's research lab. These multiple intramolecular cyclized/knotted units mimic the characteristics of complex knots found in proteins and DNA which provide some elasticity to these structures. Of note, 85% of elasticity in natural rubber is due to knot-like structures within its molecular chain.
An intramolecular cyclization reaction is where the growing polymer chain reacts with a vinyl functional group on its own chain, rather than with another growing chain in the reaction system. In this way the growing polymer chain covalently links to itself in a fashion similar to that of a knot in a piece of string. As such, single chain cyclized/knotted polymers consist of many of these links, as opposed to other polymer architectures including branched and crosslinked polymers that are formed by two or more polymer chains in combination.

Functionalized polyolefins are olefin polymers with polar and nonpolar functionalities attached onto the polymer backbone. There has been an increased interest in functionalizing polyolefins due to their increased usage in everyday life. Polyolefins are virtually ubiquitous in everyday life, from consumer food packaging to biomedical applications; therefore, efforts must be made to study catalytic pathways towards the attachment of various functional groups onto polyolefins in order to affect the material's physical properties.

Catalyst transfer polymerization (CTP), or Catalyst Transfer Polycondensation, is a type of living chain-growth polymerization that is used for synthesizing conjugated polymers. Benefits to using CTP over other methods are lowpolydispersity and control over number average molecular weight in the resulting polymers. Very few monomers have been demonstrated to undergo CTP.

The methods for sequence analysis of synthetic polymers differ from the sequence analysis of biopolymers. Synthetic polymers are produced by chain-growth or step-growth polymerization and show thereby polydispersity, whereas biopolymers are synthesized by complex template-based mechanisms and are sequence-defined and monodisperse. Synthetic polymers are a mixture of macromolecules of different length and sequence and are analysed via statistical measures.

References

  1. 1 2 Lutz, Jean-François; Ouchi, Makoto; Liu, David R.; Sawamoto, Mitsuo (2013-08-09). "Sequence-Controlled Polymers". Science. 341 (6146): 1238149. doi:10.1126/science.1238149. ISSN   0036-8075. PMID   23929982.
  2. Lutz, Jean-François (2017-12-01). "Defining the Field of Sequence-Controlled Polymers". Macromolecular Rapid Communications. 38 (24): n/a. doi:10.1002/marc.201700582. ISSN   1521-3927. PMID   29160615.
  3. Lehto, Taavi; Wagner, Ernst (2014-12-23). "Sequence-defined polymers for the delivery of oligonucleotides". Nanomedicine. 9 (18): 2843–2859. doi:10.2217/nnm.14.166. PMID   25535686.
  4. Aksakal, R.; Mertens, C.; Soete, M.; Badi, N.; Du Prez, F. "Applications of Discrete Synthetic Macromolecules in Life and Materials Science: Recent and Future Trends". Advanced Science. 2021 (2004038): 1–22. doi:10.1002/advs.202004038.