Calcium binding protein 2

Last updated


Calcium binding protein 2, also known as CaBP2, is a protein that in humans is encoded by the CABP2 gene.

The CABP2 gene comprises 6 exons, spanning approximately 5 kb, and is situated on chromosome 11q13.1. [1]

CaBP2 contain a consensus sequence for N-terminal myristoylation, akin to members of the recoverin subfamily, and undergoes fatty acid acylation in vitro. [1]

Function and clinical significance

CaBP2 involves in calcium signaling and regulation. Specifically, CaBP2 is known for its ability to bind calcium ions, acting as a calcium sensor within cells. [2] This interaction with calcium plays a crucial role in various cellular processes, including neurotransmitter release in neurons and modulation of ion channels. CaBP2 is found in the retina and plays a significant role in visual signal processing. It interacts with other proteins, including those involved in the phototransduction cascade, contributing to the regulation of calcium levels in response to light stimuli. [3] [4]

Moreover, The CaBP2 protein is highly expressed in the cochlea. [5] Non-syndromic autosomal recessive hearing impairment DFNB93, caused by defects in the CABP2 gene. Genetic defects in CABP2 may result in moderate to severe sensorineural hearing impairment. [6] [7]

As of 2021, CaBP2-related non-syndromic hearing impairment has been reported in only a few families worldwide, including those in Iran, Turkey, Pakistan, Italy, and Denmark. [8]

Related Research Articles

Nonsyndromic deafness is hearing loss that is not associated with other signs and symptoms. In contrast, syndromic deafness involves hearing loss that occurs with abnormalities in other parts of the body. Nonsyndromic deafness constitutes 75% of all hearing loss cases, and an estimated 100 genes are thought to be linked to this condition. About 80% are linked to autosomal recessive inheritance, 15% to autosomal dominant inheritance, 1-3% through the X chromosome, and 0.5-1% are associated with mitochondrial inheritance.

<span class="mw-page-title-main">RANBP2</span> Protein-coding gene in the species Homo sapiens

RAN binding protein 2 (RANBP2) is protein which in humans is encoded by the RANBP2 gene. It is also known as nucleoporin 358 (Nup358) since it is a member nucleoporin family that makes up the nuclear pore complex. RanBP2 has a mass of 358 kDa.

<span class="mw-page-title-main">USH1C</span>

Harmonin is a protein that in humans is encoded by the USH1C gene. It is expressed in sensory cells of the inner ear and retina, where it plays a role in hearing, balance, and vision. Mutations at the USH1C locus cause Usher syndrome type 1c and nonsyndromic sensorineural deafness.

<span class="mw-page-title-main">CDH23</span> Protein-coding gene in the species Homo sapiens

Cadherin-23 is a protein that in humans is encoded by the CDH23 gene.

<span class="mw-page-title-main">GJB6</span> Protein-coding gene in the species Homo sapiens

Gap junction beta-6 protein (GJB6), also known as connexin 30 (Cx30) — is a protein that in humans is encoded by the GJB6 gene. Connexin 30 (Cx30) is one of several gap junction proteins expressed in the inner ear. Mutations in gap junction genes have been found to lead to both syndromic and nonsyndromic deafness. Mutations in this gene are associated with Clouston syndrome.

<span class="mw-page-title-main">WFS1</span> Protein-coding gene in the species Homo sapiens

Wolframin is a protein that in humans is encoded by the WFS1 gene.

<span class="mw-page-title-main">GJB3</span> Mammalian protein found in Homo sapiens

Gap junction beta-3 protein (GJB3), also known as connexin 31 (Cx31) — is a protein that in humans is encoded by the GJB3 gene.

<span class="mw-page-title-main">CTBP2</span> Protein-coding gene in the species Homo sapiens

C-terminal-binding protein 2 also known as CtBP2 is a protein that in humans is encoded by the CTBP2 gene.

<span class="mw-page-title-main">RANBP1</span> Protein-coding gene in the species Homo sapiens

Ran-specific binding protein 1 is an enzyme that in humans is encoded by the RANBP1 gene.

<span class="mw-page-title-main">Calcium-binding protein 1</span> Protein found in humans

Calcium binding protein 1 is a protein that in humans is encoded by the CABP1 gene. Calcium-binding protein 1 is a calcium-binding protein discovered in 1999. It has two EF hand motifs and is expressed in neuronal cells in such areas as hippocampus, habenular nucleus of the epithalamus, Purkinje cell layer of the cerebellum, and the amacrine cells and cone bipolar cells of the retina.

<span class="mw-page-title-main">TECTA</span> Protein-coding gene in the species Homo sapiens

Alpha-tectorin is a protein that in humans is encoded by the TECTA gene.

<span class="mw-page-title-main">Otoferlin</span> Protein-coding gene in the species Homo sapiens

Otoferlin is a protein that in humans is encoded by the OTOF gene. It is involved in vesicle membrane fusion, and mutations in the OTOF gene are associated with a genetic form of deafness.

<span class="mw-page-title-main">Calcium-binding mitochondrial carrier protein Aralar1</span> Protein found in humans

Calcium-binding mitochondrial carrier protein Aralar1 is a protein that in humans is encoded by the SLC25A12 gene. Aralar is an integral membrane protein located in the inner mitochondrial membrane. Its primary function as an antiporter is the transport of cytoplasmic glutamate with mitochondrial aspartate across the inner mitochondrial membrane, dependent on the binding of one calcium ion. Mutations in this gene cause early infantile epileptic encephalopathy 39 (EIEE39), symptomized by global hypomyelination of the central nervous system, refractory seizures, and neurodevelopmental impairment. This gene has connections to autism.

<span class="mw-page-title-main">TMC1</span> Protein-coding gene in the species Homo sapiens

Transmembrane channel-like protein 1 is a protein that in humans is encoded by the TMC1 gene. TMC1 contains six transmembrane domains with both the C and N termini on the endoplasmic side of the membrane, as well as a large loop between domains 4 and 5. This topology is similar to that of transient receptor potential channels (TRPs), a family of proteins involved in the perception of senses such as temperature, taste, pressure, and vision. TMC1 has been located in the post-natal mouse cochlea, and knockouts for TMC1 and TMC2 result in both auditory and vestibular deficits indicating TMC1 is a molecular part of auditory transduction.

<span class="mw-page-title-main">STRC</span> Protein-coding gene in the species Homo sapiens

Stereocilin is a protein that in humans is encoded by the STRC gene.

<span class="mw-page-title-main">Polycystic kidney disease</span> Congenital disorder of urinary system

Polycystic kidney disease is a genetic disorder in which the renal tubules become structurally abnormal, resulting in the development and growth of multiple cysts within the kidney. These cysts may begin to develop in utero, in infancy, in childhood, or in adulthood. Cysts are non-functioning tubules filled with fluid pumped into them, which range in size from microscopic to enormous, crushing adjacent normal tubules and eventually rendering them non-functional as well.

<span class="mw-page-title-main">Autosomal recessive polycystic kidney disease</span> Medical condition

Autosomal recessive polycystic kidney disease (ARPKD) is the recessive form of polycystic kidney disease. It is associated with a group of congenital fibrocystic syndromes. Mutations in the PKHD1 cause ARPKD.

Kenny-Caffey syndrome type 2 (KCS2) is an extremely rare autosomal dominant genetic condition characterized by dwarfism, hypermetropia, microphthalmia, and skeletal abnormalities. This subtype of Kenny-Caffey syndrome is caused by a heterozygous mutation in the FAM111A gene (615292) on chromosome 11q12.

Halperin-Birk syndrome (HLBKS) is a rare autosomal recessive neurodevelopmental disorder caused by a null mutation in the SEC31A gene. Signs and symptoms include intrauterine growth retardation, marked developmental delay, spastic quadriplegia with profound contractures, dysmorphism, and optic nerve atrophy with no eye fixation. Brain MRI demonstrated microcephaly and agenesis of the corpus callosum.

P14 deficiency is a rare autosomal recessive disease characterized as a primary immunodeficiency syndrome. This disease was first identified within a white Mennonite family by Professor Bodo Grimbacher and Professor Christoph Klein’s teams in 2006. Four out of 15 offspring in this family showed symptoms including short stature, recurrent infection of Streptococcus pneumonia, and dysfunction of cells that contain specific lysosome-related organelles, including cytotoxic T cells, melanocytes, and neutrophil granulocytes.

References

  1. 1 2 Haeseleer, Françoise; Sokal, Izabela; Verlinde, Christophe L.M.J.; Erdjument-Bromage, Hediye; Tempst, Paul; Pronin, Alexey N.; Benovic, Jeffrey L.; Fariss, Robert N.; Palczewski, Krzysztof (2000). "Five Members of a Novel Ca2+-binding Protein (CABP) Subfamily with Similarity to Calmodulin". Journal of Biological Chemistry. 275 (2): 1247–1260. doi: 10.1074/jbc.275.2.1247 . ISSN   0021-9258. PMC   1364469 . PMID   10625670.
  2. Haynes, Lee P.; McCue, Hannah V.; Burgoyne, Robert D. (2012). "Evolution and functional diversity of the Calcium Binding Proteins (CaBPs)". Frontiers in Molecular Neuroscience. 5: 9. doi: 10.3389/fnmol.2012.00009 . ISSN   1662-5099. PMC   3284769 . PMID   22375103.
  3. Williams, R.J.P. (2000). "A survey of the Sixth European Symposium on Calcium-binding Proteins". Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 1498 (2–3): 82–83. doi: 10.1016/s0167-4889(00)00116-6 . ISSN   0167-4889. PMID   11108951.
  4. Sinha, Raunak; Lee, Amy; Rieke, Fred; Haeseleer, Françoise (2016). "Lack of CaBP1/Caldendrin or CaBP2 Leads to Altered Ganglion Cell Responses". eNeuro. 3 (5): ENEURO.0099–16.2016. doi: 10.1523/eneuro.0099-16.2016 . ISSN   2373-2822. PMC   5083949 . PMID   27822497.
  5. Yang, Tian; Hu, Ning; Pangršič, Tina; Green, Steven; Hansen, Marlan; Lee, Amy (2018). "Functions of CaBP1 and CaBP2 in the peripheral auditory system". Hearing Research. 364: 48–58. doi: 10.1016/j.heares.2018.04.001 . ISSN   0378-5955. PMC   6954825 . PMID   29661613.
  6. Schrauwen, Isabelle; Helfmann, Sarah; Inagaki, Akira; Predoehl, Friederike; Tabatabaiefar, Mohammad Amin; Picher, Maria Magdalena; Sommen, Manou; Zazo Seco, Celia; Oostrik, Jaap; Kremer, Hannie; Dheedene, Annelies; Claes, Charlotte; Fransen, Erik; Chaleshtori, Morteza Hashemzadeh; Coucke, Paul (2012). "A Mutation in CABP2, Expressed in Cochlear Hair Cells, Causes Autosomal-Recessive Hearing Impairment". The American Journal of Human Genetics. 91 (4): 636–645. doi: 10.1016/j.ajhg.2012.08.018 . ISSN   0002-9297. PMC   3484643 . PMID   22981119.
  7. Oestreicher, David; Picher, Maria Magdalena; Rankovic, Vladan; Moser, Tobias; Pangrsic, Tina (2021-08-19). "Cabp2-Gene Therapy Restores Inner Hair Cell Calcium Currents and Improves Hearing in a DFNB93 Mouse Model". Frontiers in Molecular Neuroscience. 14. doi: 10.3389/fnmol.2021.689415 . ISSN   1662-5099. PMC   8417311 . PMID   34489639.
  8. Sheyanth, Inger Norlyk; Højland, Allan Thomas; Okkels, Henrik; Lolas, Ihab; Thorup, Christian; Petersen, Michael Bjørn (2021). "First reported CABP2 -related non-syndromic hearing loss in Northern Europe". Molecular Genetics & Genomic Medicine. 9 (4): e1639. doi:10.1002/mgg3.1639. ISSN   2324-9269. PMC   8123739 . PMID   33666369.