Cyclic enzyme system

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A cyclic enzyme system is a theoretical system of two enzymes sharing a single substrate or cofactor, also referred to as a biochemical switching device. [1] It has been used as a biochemical implementation of a simple computational device, acting as a chemical diode. [2]

Enzyme biological molecule

Enzymes are macromolecular biological catalysts. Enzymes accelerate chemical reactions. The molecules upon which enzymes may act are called substrates and the enzyme converts the substrates into different molecules known as products. Almost all metabolic processes in the cell need enzyme catalysis in order to occur at rates fast enough to sustain life. Metabolic pathways depend upon enzymes to catalyze individual steps. The study of enzymes is called enzymology and a new field of pseudoenzyme analysis has recently grown up, recognising that during evolution, some enzymes have lost the ability to carry out biological catalysis, which is often reflected in their amino acid sequences and unusual 'pseudocatalytic' properties.

Cofactor (biochemistry) a non-protein chemical compound or metallic ion that is required for a proteins biological activity to happen

A cofactor is a non-protein chemical compound or metallic ion that is required for an enzyme's activity. Cofactors can be considered "helper molecules" that assist in biochemical transformations. The rates at which these happen are characterized by enzyme kinetics.

Biochemistry study of chemical processes in living organisms

Biochemistry, sometimes called biological chemistry, is the study of chemical processes within and relating to living organisms. Biochemical processes give rise to the complexity of life.

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Pseudoenzymes are variants of enzymes that are catalytically deficient, meaning that they perform little or no enzyme catalysis. They are believed to be represented in all major enzyme families in the kingdoms of life. Pseudoenzymes are becoming increasingly important to analyse, especially as the bioinformatic analysis of genomes reveals their ubiquity. Their important regulatory and sometimes disease-associated functions in metabolic and signalling pathways are also shedding new light on the non-catalytic functions of active enzymes, and are suggesting new ways to target and interpret cellular signalling mechanisms using small molecules and drugs. The most intensively analyzed, and certainly the best understood pseudoenzymes in terms of cellular signalling functions are probably the pseudokinases, the pseudoproteases and the pseudophosphatases.

References

  1. Okamoto M, Hayashi K (1983). "Dynamic behavior of cyclic enzyme systems". J. Theor. Biol. 104 (4): 591–8. doi:10.1016/0022-5193(83)90247-3. PMID   6645563.
  2. Okamoto M, Sakai T, Hayashi K (1987). "Switching mechanism of a cyclic enzyme system: role as a "chemical diode"". BioSystems. 21 (1): 1–11. doi:10.1016/0303-2647(87)90002-5. PMID   3689885.