Extinction is a term used in optical mineralogy and petrology, which describes when cross-polarized light dims, as viewed through a thin section of a mineral in a petrographic microscope. Isotropic minerals, opaque (metallic) minerals, and amorphous materials (glass) do not allow light transmission under cross-polarized light (i.e. constant extinction). Anisotropic minerals specifically will show one extinction for each 90 degrees of stage rotation.
The extinction angle is the measure between the cleavage direction or habit of a mineral and the extinction. To find this, simply line up the cleavage lines/long direction with one of the crosshairs in the microscope, and turn the mineral until the extinction occurs. The number of degrees the stage was rotated is the extinction angle, between 0-89 degrees. 90 degrees would be considered zero degrees, and is known as parallel extinction. Inclined extinction is a measured angle between 1-89 degrees. Minerals with two cleavages can have two extinction angles, with symmetrical extinction occurring when minerals have multiple angles that are the same. Minerals that have no cleavage or elongation can not have an extinction angle.
Minerals with undulose extinction, solid solution/zonation, or other factors (e.g. bird's eye extinction in mica) that may inhibit this measure and may be more difficult to use.
Biotite is a common group of phyllosilicate minerals within the mica group, with the approximate chemical formula K(Mg,Fe)3AlSi3O10(F,OH)2. It is primarily a solid-solution series between the iron-endmember annite, and the magnesium-endmember phlogopite; more aluminous end-members include siderophyllite and eastonite. Biotite was regarded as a mineral species by the International Mineralogical Association until 1998, when its status was changed to a mineral group. The term biotite is still used to describe unanalysed dark micas in the field. Biotite was named by J.F.L. Hausmann in 1847 in honor of the French physicist Jean-Baptiste Biot, who performed early research into the many optical properties of mica.
Mineralogy is a subject of geology specializing in the scientific study of the chemistry, crystal structure, and physical properties of minerals and mineralized artifacts. Specific studies within mineralogy include the processes of mineral origin and formation, classification of minerals, their geographical distribution, as well as their utilization.
Polarization is a property of transverse waves which specifies the geometrical orientation of the oscillations. In a transverse wave, the direction of the oscillation is perpendicular to the direction of motion of the wave. A simple example of a polarized transverse wave is vibrations traveling along a taut string (see image); for example, in a musical instrument like a guitar string. Depending on how the string is plucked, the vibrations can be in a vertical direction, horizontal direction, or at any angle perpendicular to the string. In contrast, in longitudinal waves, such as sound waves in a liquid or gas, the displacement of the particles in the oscillation is always in the direction of propagation, so these waves do not exhibit polarization. Transverse waves that exhibit polarization include electromagnetic waves such as light and radio waves, gravitational waves, and transverse sound waves in solids.
A waveplate or retarder is an optical device that alters the polarization state of a light wave travelling through it. Two common types of waveplates are the half-wave plate, which shifts the polarization direction of linearly polarized light, and the quarter-wave plate, which converts linearly polarized light into circularly polarized light and vice versa. A quarter-wave plate can be used to produce elliptical polarization as well.
Pleochroism is an optical phenomenon in which a substance has different colors when observed at different angles, especially with polarized light.
Birefringence is the optical property of a material having a refractive index that depends on the polarization and propagation direction of light. These optically anisotropic materials are said to be birefringent. The birefringence is often quantified as the maximum difference between refractive indices exhibited by the material. Crystals with non-cubic crystal structures are often birefringent, as are plastics under mechanical stress.
Cleavage, in mineralogy and materials science, is the tendency of crystalline materials to split along definite crystallographic structural planes. These planes of relative weakness are a result of the regular locations of atoms and ions in the crystal, which create smooth repeating surfaces that are visible both in the microscope and to the naked eye. If bonds in certain directions are weaker than others, the crystal will tend to split along the weakly bonded planes. These flat breaks are termed "cleavage". The classic example of cleavage is mica, which cleaves in a single direction along the basal pinacoid, making the layers seem like pages in a book. In fact, mineralogists often refer to "books of mica".
Todorokite is a complex hydrous manganese oxide mineral with generic chemical formula (Na,Ca,K,Ba,Sr)
1-x(Mn,Mg,Al)
6O
12·3-4H
2O. It was named in 1934 for the type locality, the Todoroki mine, Hokkaido, Japan. It belongs to the prismatic class 2/m of the monoclinic crystal system, but the angle β between the a and c axes is close to 90°, making it seem orthorhombic. It is a brown to black mineral which occurs in massive or tuberose forms. It is quite soft with a Mohs hardness of 1.5, and a specific gravity of 3.49 - 3.82. It is a component of deep ocean basin manganese nodules.
A polarizer or polariser is an optical filter that lets light waves of a specific polarization pass through while blocking light waves of other polarizations. It can filter a beam of light of undefined or mixed polarization into a beam of well-defined polarization, that is polarized light. The common types of polarizers are linear polarizers and circular polarizers. Polarizers are used in many optical techniques and instruments, and polarizing filters find applications in photography and LCD technology. Polarizers can also be made for other types of electromagnetic waves besides visible light, such as radio waves, microwaves, and X-rays.
In optical mineralogy and petrography, a thin section is a thin slice of a rock or mineral sample, prepared in a laboratory, for use with a polarizing petrographic microscope, electron microscope and electron microprobe. A thin sliver of rock is cut from the sample with a diamond saw and ground optically flat. It is then mounted on a glass slide and then ground smooth using progressively finer abrasive grit until the sample is only 30 μm thick. The method uses the Michel-Lévy interference colour chart to determine thickness, typically using quartz as the thickness gauge because it is one of the most abundant minerals.
Optical mineralogy is the study of minerals and rocks by measuring their optical properties. Most commonly, rock and mineral samples are prepared as thin sections or grain mounts for study in the laboratory with a petrographic microscope. Optical mineralogy is used to identify the mineralogical composition of geological materials in order to help reveal their origin and evolution.
A petrographic microscope is a type of optical microscope used to identify rocks and minerals in thin sections. The microscope is used in optical mineralogy and petrography, a branch of petrology which focuses on detailed descriptions of rocks. The method includes aspects of polarized light microscopy (PLM).
In optical mineralogy, an interference colour chart, also known as the Michel-Levy chart, is a tool first developed by Auguste Michel-Lévy to identify minerals in thin section using a petrographic microscope. With a known thickness of the thin section, minerals have specific and predictable colours in cross-polarized light, and this chart can help identify minerals. The colours are produced by the difference in speed in the fast and slow rays, also known as birefringence.
A conoscopic interference pattern or interference figure is a pattern of birefringent colours crossed by dark bands, which can be produced using a geological petrographic microscope for the purposes of mineral identification and investigation of mineral optical and chemical properties. The figures are produced by optical interference when diverging light rays travel through an optically non-isotropic substance – that is, one in which the substance's refractive index varies in different directions within it. The figure can be thought of as a "map" of how the birefringence of a mineral would vary with viewing angle away from perpendicular to the slide, where the central colour is the birefringence seen looking straight down, and the colours further from the centre equivalent to viewing the mineral at ever increasing angles from perpendicular. The dark bands correspond to positions where optical extinction would be seen. In other words, the interference figure presents all possible birefringence colours for the mineral at once.
Marrite (mar'-ite) is a mineral with the chemical formula PbAgAsS3. It is the arsenic equivalent of freieslebenite (PbAgSbS3), but also displays close polyhedral characteristics with sicherite and diaphorite. Marrite was named in honor of geologist John Edward Marr (1857–1933) of Cambridge, England.
Jonesite is a mineral with the chemical formula Ba4(K,Na)2[Ti4Al2Si10O36]*6H2O. This mineral is named after Francis Tucker Jones (1905–1993), who discovered the mineral while working as a Research Chemical Microscopist at Berkeley in CA. Jonesite has diffraction symmetry of mmm, which implies an orthorhombic system with all three axes perpendicular to each other and the angles between each axis equal to 90 degrees. In addition to symmetrical properties, Jonesite is a biaxial mineral with birefringence, which is a term to describe the difference between index of refraction. Jonesite is anisotropic, meaning the speed of light changes through the mineral, so the mineral shows color when viewed in crossed polarized light under a microscope. The mineral also has medium relief, which is a measure of how well the mineral stands out when viewed under a microscope in plane polarized light. In addition to being one of the rarest minerals in the Benitoite Gem mine located in California, Jonesite also is the first titanosilicate mineral with a porous double-layered crystal structure. This discovery is important because titanosilicate frameworks have industrial uses in energy companies and are used in containing radioactive waste.
Nambulite is a lithium bearing manganese silicate mineral with the chemical formula (Li,Na)Mn4Si5O14(OH). It is named after the mineralogist, Matsuo Nambu (born 1917) of Tohoko University, Japan, who is known for his research in manganese minerals. The mineral was first discovered in the Funakozawa Mine of northeastern Japan, a metasedimentary manganese ore.
Annite is a phyllosilicate mineral in the mica family. It has a chemical formula of KFe32+AlSi3O10(OH)2. Annite is the iron end member of the biotite mica group, the iron rich analogue of magnesium rich phlogopite. Annite is monoclinic and contains tabular crystals and cleavage fragments with pseudohexagonal outlines. There are contact twins with composition surface {001} and twin axis {310}.
Carminite (PbFe3+2(AsO4)2(OH)2) is an anhydrous arsenate mineral containing hydroxyl. It is a rare secondary mineral that is structurally related to palermoite (Li2SrAl4(PO4)4(OH)4). Sewardite (CaFe3+2(AsO4)2(OH)2) is an analogue of carminite, with calcium in sewardite in place of the lead in carminite. Mawbyite is a dimorph (same formula, different structure) of carminite; mawbyite is monoclinic and carminite is orthorhombic. It has a molar mass of 639.87 g. It was discovered in 1850 and named for the characteristic carmine colour.