Francis Ouellette

Last updated
B.F. Francis Ouellette
Francis Ouellette.jpg
Ouellette in 2025
Born (1960-06-03) June 3, 1960 (age 65)
Quebec City, Québec, Canada
Alma mater McGill University, University of Calgary
Known forBioinformatics training in Canada, Open Science advocacy, GenBank coordination, ISCB leadership
Children2
Scientific career
Fields Bioinformatics, Genomics, Computational Biology
Institutions McGill University, National Center for Biotechnology Information/NLM/NIH, University of British Columbia, Ontario Institute for Cancer Research, Genome Québec.

B.F. Francis Ouellette (born 3 June 1960) is a Canadian bioinformatician. His work has focused on genome annotation, data resources for molecular biology, and training in bioinformatics. He has held research and administrative positions in Canada and the United States and serves on several editorial and scientific advisory boards.

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Career

Ouellette began his career at McGill University in the early 1990s, coordinating the sequencing of Saccharomyces cerevisiae chromosome I. From 1993 to 1998 he worked at the National Center for Biotechnology Information (NCBI) at the NIH as the GenBank coordinator, overseeing sequence submissions and contributing to databases such as dbEST and RefSeq.

From 1998 to 2007 he held positions at the University of British Columbia, including director of the CMMT Bioinformatics Core and of the UBC Bioinformatics Centre (UBiC). He was also associate professor in the Department of Medical Genetics and the Michael Smith Laboratory, and helped develop one of Canada's first graduate programs in bioinformatics with colleagues at UBC and SFU.

Between 2007 and 2017 Ouellette was associate director of informatics and biocomputing at the Ontario Institute for Cancer Research (OICR), where he led data‑management and software projects associated with the ICGC. He later served as chief scientific officer at Genome Québec (2017–2018) and executive director of the Neuro Bioinformatics Core Facility at the Montréal Neurological Institute (2021–2022).

As of 2025 he works as an independent consultant and participates in editorial and advisory activities.

Research and contributions

Ouellette's research has addressed genome annotation, protein–protein interaction databases, and transcriptomics. He co‑authored more than 80 publications and was a co‑lead on the Biomolecular Interaction Network Database (BIND).

He co‑edited Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins with Andreas Baxevanis, published in three editions by Wiley between 1998 and 2005. [1]

He also directed the Canadian Bioinformatics Workshops program (bioinformatics.ca), which offered short courses and training events in bioinformatics from 1999 to 2021.


Education


Professional Services and Recognitions

Publications

References

  1. Baxevanis, Andreas D.; Ouellette, B.F. Francis (2005). Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins (3rd ed.). Wiley. ISBN   0-471-47878-4.
  2. "Member of the SGD SAB". Saccharomyces Genome Database. Retrieved 2025-10-14.
  3. "Chair and Member of the H3ABioNet SAB". H3ABioNet. Retrieved 2025-10-14.
  4. "Chair and Member of the ELIXIR Europe SAB". ELIXIR (archived). Retrieved 2025-10-14.
  5. "Associate Editor, DATABASE". Oxford University Press. Retrieved 2025-10-14.
  6. "Member of the Genome Canada Science Industry Advisory Committee". Genome Canada (archived). Retrieved 2025-10-14.
  7. "Section Editor, PLOS Computational Biology". PLoS Computational Biology. Retrieved 2025-10-14.
  8. "Co-Chair, Intelligent Systems for Molecular Biology". www.iscb.org/. Retrieved 2025-10-14.
  9. "Member of the JXTX Board of directors". JXTX Foundation. Retrieved 2025-10-14.
  10. "ISCB Fellows". www.iscb.org/. Retrieved 2025-10-14.
  11. "Member, ISCB Industry Advisory Council". www.iscb.org/. Retrieved 2025-10-14.
  12. "Honorary Chair, ISMB 2024". www.iscb.org/. Retrieved 2025-10-14.
  13. "Member, Board of Directors for the ISCB". www.iscb.org/. Retrieved 2025-10-14.