Group transfer reaction

Last updated

In organic chemistry, a group transfer reaction is a class of the pericyclic reaction where one or more groups of atoms is transferred from one molecule to another. Group transfer reactions can sometimes be difficult to identify when separate reactant molecules combine into a single product molecule (like in the ene reaction). Unlike other pericyclic reaction classes, group transfer reactions do not have a specific conversion of pi bonds into sigma bonds or vice versa, and tend to be less frequently encountered. Like all pericyclic reactions, group transfer reactions must obey the Woodward–Hoffmann rules. [1] Group transfer reactions can be divided into two distinct subcategories: the ene reaction and the diimide reduction. [2] Group transfer reactions have diverse applications in various fields, including protein adenylation, biocatalytic and chemoenzymatic approaches for chemical synthesis, and strengthening skim natural rubber latex. [3] [4] [5] [6]

Contents

Mechanism

A defining feature of the group transfer reaction is that it is a concerted reaction, in which a bond is broken and formed in one step. The concerted reaction occurs due to the orbital overlap between the alkene and the allylic enophile. [2] The electrons in the highest occupied molecular orbital (HOMO) of the ene are transferred to the lowest occupied molecular orbital (LUMO) of the enophile. [7]

Figure 1. The mechanism of the group transfer reaction is allowed by the orbital overlap of the HOMO of the ene and the LUMO of the enophile. Ene reaction orbitals and transition state.svg
Figure 1. The mechanism of the group transfer reaction is allowed by the orbital overlap of the HOMO of the ene and the LUMO of the enophile.

Sub-categories of Group Transfer Reactions

Ene Reaction

The ene reaction is one of the most common forms of group transfer reactions, where an allylic hydrogen is transferred to an alkene in a cyclic concerted mechanism. The ene reaction is further divided into subgroups including intramolecular ene, metallo-ene, and carbonyl ene reactions. [8] The reverse reaction, commonly called the retro-ene reaction, can occur under high temperatures. [2]

Figure 2. Generic ene reaction. Figure1newene.png
Figure 2. Generic ene reaction.

Reductions with Diimide

Reductions with diimide is another class of group transfer reactions, in which alkenes and alkynes are reduced concertedly with diimide as the reducing agent. In the generic mechanism of a reduction with diimide (Figure 3), nitrogen gas is lost as a result. The diimide reduction displays a higher selectivity for the symmetrical homonuclear C=C double bond compared to the heteronuclear C=O double bond. Along with a preference for reducing the least conjugated double bond, showcasing the precision of reductions with diimides in targeted organic synthesis. [9]

Figure 3. Generic mechanism of a reduction with diimide adapted from Mandal . Reduction diimide.png
Figure 3. Generic mechanism of a reduction with diimide adapted from Mandal .

Applications of Group Transfer Reactions

Protein Adenylylation

Group transfer reactions are prevalent in many biological mechanisms. [3] One example is protein adenylylation, where adenosine triphosphate (ATP) transfers an adenosine monophosphate group to another protein at threonine or tyrosine residues. Adenylylation protein modification adds a negative charge to the protein and thus changes its protein function. [4] Protein adenylylation is especially documented in bacterial modification of GTPases, since this modification of GTPases via adenylylation prevents the host cell’s ability to prevent infection. [3] [4]

Figure 4. Scheme of protein adenylylation of threonine and tyrosine side chains, a biological application of group transfer reactions. This figure is adapted from Hedberg and Itzen. Protein adenylylation.png
Figure 4. Scheme of protein adenylylation of threonine and tyrosine side chains, a biological application of group transfer reactions. This figure is adapted from Hedberg and Itzen.

Biocatalytic and Chemoenzymatic Approaches for Chemical Synthesis

The application of the ene reduction can be observed in both biocatalytic and chemoenzymatic approaches for chemical synthesis. The capacity of ene reduction to catalyze diverse reactions with high selectivity renders it a valuable tool in the synthesis of complex and stereospecific compounds. Ene reduction plays a role in the production of fine chemicals, pharmaceutical compounds, agrochemicals, and biofuels. Highlighting the functionality of ene reductases emphasizes their crucial role in catalyzing a variety of reactions. One example is the ene-reductase Old-Yellow-Enzyme (OYE) which can reduce a carbon-carbon double bond (C=C) with a catalytic amount of NADH. [5]

Figure 5. The ene reduction of an alkene using OYE2 ene reductase. This figure is adapted from an article on the Discovery, Characterization, Engineering, and Applications of Ene-Reductases for Industrial Biocatalysis . The ene reduction of an alkene using OYE2 ene reductase.png
Figure 5. The ene reduction of an alkene using OYE2 ene reductase. This figure is adapted from an article on the Discovery, Characterization, Engineering, and Applications of Ene-Reductases for Industrial Biocatalysis .

Related Research Articles

<span class="mw-page-title-main">Alkene</span> Hydrocarbon compound containing one or more C=C bonds

In organic chemistry, an alkene, or olefin, is a hydrocarbon containing a carbon–carbon double bond. The double bond may be internal or in the terminal position. Terminal alkenes are also known as α-olefins.

<span class="mw-page-title-main">Allyl group</span> Chemical group (–CH₂–CH=CH₂)

In organic chemistry, an allyl group is a substituent with the structural formula −CH2−HC=CH2. It consists of a methylene bridge attached to a vinyl group. The name is derived from the scientific name for garlic, Allium sativum. In 1844, Theodor Wertheim isolated an allyl derivative from garlic oil and named it "Schwefelallyl". The term allyl applies to many compounds related to H2C=CH−CH2, some of which are of practical or of everyday importance, for example, allyl chloride.

<span class="mw-page-title-main">Pericyclic reaction</span> Reaction with a cyclic transition state

In organic chemistry, a pericyclic reaction is the type of organic reaction wherein the transition state of the molecule has a cyclic geometry, the reaction progresses in a concerted fashion, and the bond orbitals involved in the reaction overlap in a continuous cycle at the transition state. Pericyclic reactions stand in contrast to linear reactions, encompassing most organic transformations and proceeding through an acyclic transition state, on the one hand and coarctate reactions, which proceed through a doubly cyclic, concerted transition state on the other hand. Pericyclic reactions are usually rearrangement or addition reactions. The major classes of pericyclic reactions are given in the table below. Ene reactions and cheletropic reactions are often classed as group transfer reactions and cycloadditions/cycloeliminations, respectively, while dyotropic reactions and group transfer reactions are rarely encountered.

The Wolff–Kishner reduction is a reaction used in organic chemistry to convert carbonyl functionalities into methylene groups. In the context of complex molecule synthesis, it is most frequently employed to remove a carbonyl group after it has served its synthetic purpose of activating an intermediate in a preceding step. As such, there is no obvious retron for this reaction. The reaction was reported by Nikolai Kischner in 1911 and Ludwig Wolff in 1912.

The Stille reaction is a chemical reaction widely used in organic synthesis. The reaction involves the coupling of two organic groups, one of which is carried as an organotin compound (also known as organostannanes). A variety of organic electrophiles provide the other coupling partner. The Stille reaction is one of many palladium-catalyzed coupling reactions.

<span class="mw-page-title-main">Ene reaction</span> Reaction in organic chemistry

In organic chemistry, the ene reaction is a chemical reaction between an alkene with an allylic hydrogen and a compound containing a multiple bond, in order to form a new σ-bond with migration of the ene double bond and 1,5 hydrogen shift. The product is a substituted alkene with the double bond shifted to the allylic position.

The 1,3-dipolar cycloaddition is a chemical reaction between a 1,3-dipole and a dipolarophile to form a five-membered ring. The earliest 1,3-dipolar cycloadditions were described in the late 19th century to the early 20th century, following the discovery of 1,3-dipoles. Mechanistic investigation and synthetic application were established in the 1960s, primarily through the work of Rolf Huisgen. Hence, the reaction is sometimes referred to as the Huisgen cycloaddition. 1,3-dipolar cycloaddition is an important route to the regio- and stereoselective synthesis of five-membered heterocycles and their ring-opened acyclic derivatives. The dipolarophile is typically an alkene or alkyne, but can be other pi systems. When the dipolarophile is an alkyne, aromatic rings are generally produced.

In organic chemistry, a rearrangement reaction is a broad class of organic reactions where the carbon skeleton of a molecule is rearranged to give a structural isomer of the original molecule. Often a substituent moves from one atom to another atom in the same molecule, hence these reactions are usually intramolecular. In the example below, the substituent R moves from carbon atom 1 to carbon atom 2:

<span class="mw-page-title-main">Claisen rearrangement</span> Chemical reaction

The Claisen rearrangement is a powerful carbon–carbon bond-forming chemical reaction discovered by Rainer Ludwig Claisen. The heating of an allyl vinyl ether will initiate a [3,3]-sigmatropic rearrangement to give a γ,δ-unsaturated carbonyl, driven by exergonically favored carbonyl CO bond formation (Δ = −327 kcal/mol.

<span class="mw-page-title-main">Biocatalysis</span> Use of natural catalysts to perform chemical transformations

Biocatalysis refers to the use of living (biological) systems or their parts to speed up (catalyze) chemical reactions. In biocatalytic processes, natural catalysts, such as enzymes, perform chemical transformations on organic compounds. Both enzymes that have been more or less isolated and enzymes still residing inside living cells are employed for this task. Modern biotechnology, specifically directed evolution, has made the production of modified or non-natural enzymes possible. This has enabled the development of enzymes that can catalyze novel small molecule transformations that may be difficult or impossible using classical synthetic organic chemistry. Utilizing natural or modified enzymes to perform organic synthesis is termed chemoenzymatic synthesis; the reactions performed by the enzyme are classified as chemoenzymatic reactions.

<span class="mw-page-title-main">Wharton reaction</span>

The Wharton olefin synthesis or the Wharton reaction is a chemical reaction that involves the reduction of α,β-epoxy ketones using hydrazine to give allylic alcohols. This reaction, introduced in 1961 by P. S. Wharton, is an extension of the Wolff–Kishner reduction. The general features of this synthesis are: 1) the epoxidation of α,β-unsaturated ketones is achieved usually in basic conditions using hydrogen peroxide solution in high yield; 2) the epoxy ketone is treated with 2–3 equivalents of a hydrazine hydrate in presence of substoichiometric amounts of acetic acid. This reaction occurs rapidly at room temperature with the evolution of nitrogen and the formation of an allylic alcohol. It can be used to synthesize carenol compounds. Wharton's initial procedure has been improved.

<span class="mw-page-title-main">Shvo catalyst</span> Chemical compound

The Shvo catalyst is an organoruthenium compound that catalyzes the hydrogenation of polar functional groups including aldehydes, ketones and imines. The compound is of academic interest as an early example of a catalyst for transfer hydrogenation that operates by an "outer sphere mechanism". Related derivatives are known where p-tolyl replaces some of the phenyl groups. Shvo's catalyst represents a subset of homogeneous hydrogenation catalysts that involves both metal and ligand in its mechanism.

Desulfonylation reactions are chemical reactions leading to the removal of a sulfonyl group from organic compounds. As the sulfonyl functional group is electron-withdrawing, methods for cleaving the sulfur–carbon bonds of sulfones are typically reductive in nature. Olefination or replacement with hydrogen may be accomplished using reductive desulfonylation methods.

The Kharasch–Sosnovsky reaction is a method that involves using a copper or cobalt salt as a catalyst to oxidize olefins at the allylic position, subsequently condensing a peroxy ester or a peroxide resulting in the formation of allylic benzoates or alcohols via radical oxidation. This method is noteworthy for being the first allylic functionalization to utilize first-row transition metals and has found numerous applications in chemical and total synthesis. Chiral ligands can be used to render the reaction asymmetric, constructing chiral C–O bonds via C–H bond activation. This is notable as asymmetric addition to allylic groups tends to be difficult due to the transition state being highly symmetric. The reaction is named after Morris S. Kharasch and George Sosnovsky who first reported it in 1958. This method is noteworthy for being the first allylic functionalization to utilize first-row transition metals and has found numerous applications in chemical and total synthesis.

The Mukaiyama hydration is an organic reaction involving formal addition of an equivalent of water across an olefin by the action of catalytic bis(acetylacetonato)cobalt(II) complex, phenylsilane and atmospheric oxygen to produce an alcohol with Markovnikov selectivity.

Vinylcyclopropane [5+2] cycloaddition is a type of cycloaddition between a vinylcyclopropane (VCP) and an olefin or alkyne to form a seven-membered ring.

The metallo-ene reaction is a chemical reaction employed within organic synthesis. Mechanistically similar to the classic ene reaction, the metallo-ene reaction involves a six-member cyclic transition state that brings an allylic species and an alkene species together to undergo a rearrangement. The initial allylic group migrates to one terminus of the alkene reactant and a new carbon-carbon sigma bond is formed between the allylic species and the other terminus of the alkene reactant. In the metallo-ene reaction, a metal ion acts as the migrating group rather than a hydrogen atom as in the classic ene reaction.

In organic chemistry, the Myers allene synthesis is a chemical reaction that converts a propargyl alcohol into an allene by way of an arenesulfonylhydrazine as a key intermediate. This name reaction is one of two discovered by Andrew Myers that are named after him; both this reaction and the Myers deoxygenation reaction involve the same type of intermediate.

In organic chemistry, the Conia-ene reaction is an intramolecular cyclization reaction between an enolizable carbonyl such as an ester or ketone and an alkyne or alkene, giving a cyclic product with a new carbon-carbon bond. As initially reported by J. M. Conia and P. Le Perchec, the Conia-ene reaction is a heteroatom analog of the ene reaction that uses an enol as the ene component. Like other pericyclic reactions, the original Conia-ene reaction required high temperatures to proceed, limiting its wider application. However, subsequent improvements, particularly in metal catalysis, have led to significant expansion of reaction scope. Consequently, various forms of the Conia-ene reaction have been employed in the synthesis of complex molecules and natural products.

The Schenck ene reaction or the Schenk reaction is the reaction of singlet oxygen with alkenes to yeild hydroperoxides. The hydroperoxides can be reduced to allylic acohols or eliminate to form unsaturated carbonyl compounds. It is a type II photooxygenation reaction, and is discovered in 1944 by Günther Otto Schenck. Its results are similar to ene reactions, hence its name.

References

  1. Singh, Jagdamba; Simha, Jaya (2005). Photochemistry And Pericyclic Reactions. New Age International. pp. 135–139. ISBN   9788122416947.
  2. 1 2 3 Dinda, Biswanath (2016-11-19), "General Aspects of Pericyclic Reactions", Essentials of Pericyclic and Photochemical Reactions, Lecture Notes in Chemistry, vol. 93, Cham: Springer International Publishing, pp. 3–11, doi:10.1007/978-3-319-45934-9_1, ISBN   978-3-319-45933-2 , retrieved 2023-11-05
  3. 1 2 3 Wimmer, Mary J.; Rose, Irwin A. (June 1978). "Mechanisms of Enzyme-Catalyzed Group Transfer Reactions" . Annual Review of Biochemistry. 47 (1): 1031–1078. doi:10.1146/annurev.bi.47.070178.005123. ISSN   0066-4154. PMID   354490.
  4. 1 2 3 4 Hedberg, Christian; Itzen, Aymelt (2015-01-16). "Molecular Perspectives on Protein Adenylylation". ACS Chemical Biology. 10 (1): 12–21. doi: 10.1021/cb500854e . ISSN   1554-8929. PMID   25486069.
  5. 1 2 3 Toogood, Helen S.; Scrutton, Nigel S. (2018-04-06). "Discovery, Characterization, Engineering, and Applications of Ene-Reductases for Industrial Biocatalysis". ACS Catalysis. 8 (4): 3532–3549. doi:10.1021/acscatal.8b00624. ISSN   2155-5435. PMC   6542678 . PMID   31157123.
  6. Simma, Khosit; Rempel, Garry L.; Prasassarakich, Pattarapan (2009-11-01). "Improving thermal and ozone stability of skim natural rubber by diimide reduction" . Polymer Degradation and Stability. 94 (11): 1914–1923. doi:10.1016/j.polymdegradstab.2009.08.005. ISSN   0141-3910.
  7. Inagaki, Satoshi; Fujimoto, Hiroshi; Fukui, Kenichi (August 1976). "Orbital interaction in three systems". Journal of the American Chemical Society. 98 (16): 4693–4701. doi:10.1021/ja00432a001. ISSN   0002-7863.
  8. Mikami, Koichi; Shimizu, Masaki (July 1992). "Asymmetric ene reactions in organic synthesis". Chemical Reviews. 92 (5): 1021–1050. doi:10.1021/cr00013a014. ISSN   0009-2665.
  9. 1 2 Mandal, Dipak K. (2018-01-01), Mandal, Dipak K. (ed.), "Chapter 10 - Group Transfer Reactions", Pericyclic Chemistry, Elsevier, pp. 431–460, ISBN   978-0-12-814958-4 , retrieved 2023-11-05