Established | 8 October 2002 |
---|---|
Location | |
Website | bifi.es |
The Institute for Biocomputation and Physics of Complex Systems (BIFI) is a research center of the University of Zaragoza devoted to the study of complex systems from a multidisciplinary perspective. Biochemists, physicists, mathematicians, computer scientists and researchers from other fields study complex systems, as well as different phenomena and processes related to them (protein folding, interaction between diseases, the spread of epidemics, multi-layer networks, collective social phenomena, etc.). The ultimate goal is to unravel various aspects of complexity, promote basic science and assess the impact of applied research and possible benefits for society.
The BIFI Institute was founded in October 2002 by a group of professors from the Faculty of Sciences of the University of Zaragoza, from the departments of theoretical physics, condensed matter physics and biochemistry and molecular biology. Its first director was the mathematician, José Félix Sáenz Lorenzo (2002–2011). [1]
From November 2003 to 2010, the institute was located in the Cervantes Building in Corona de Aragón 42, Zaragoza. In October 2006, BIFI joined the Spanish Supercomputing Network hosting the supercomputer CaesarAugusta (supercomputer) . This node became operational at the end of 2007.
In 2010, BIFI moved its facilities to the I+D+i Building, located at the Rio Ebro Campus of the University of Zaragoza, in the Actur district. The building was specifically designed to host the research institutes of the University of Zaragoza (UNIZAR). Currently, in addition to BIFI, the building hosts the Institute of Nanoscience of Aragon (INA), the Aragon Institute for Engineering Research (I3A) and the Zaragoza Scientific Center for Advanced Modeling (ZCAM).
The research developed at the BIFI Institute is divided into four macro-areas:
The fundamental objectives of BIFI are: to achieve research excellence, to transfer fundamental knowledge, to promote innovation and to train a new generation of young scientists in the use of techniques and methods from different disciplines. BIFI also fosters an open and innovative scientific culture and the development of a wide network of collaborations with prestigious institutions at national and international levels.
The science of the 21st century has a strong multidisciplinary character and the analysis of complex systems based on the holistic principle that "the whole is more than the sum of its parts" is the essence and the starting point of the institute's research.
The institute's activities also include the organization of seminars and national and international congresses. In recent years,[ when? ] it has achieved a strong institutional presence and an increasing number of collaborations established with the business world.
The Supercomputing Laboratory hosts mosts of its computing resources: The powerful "Terminus" cluster, nodes in European projects related to grid computing technologies, massive storage servers, an openSUSE repository, etc. BIFI operates Caesaraugusta, a supercomputer with 3,072 cores and 25 TFLOPs, which is the current node of Aragon in the Spanish Supercomputing Network. This computing infrastructure is supplemented by more than 10,000 volunteer computing cores (the Ibercivis project) and two special-purpose machines (JANUS I and JANUS II) devoted to material science calculations that are equivalent to several thousand cores. Finally, the Aragon Supercomputing Center CESAR has been recently opened, which adds state-of-the-art computing facilities to provide service to many end-users in the autonomous region.
The biochemistry and crystallography laboratories also have important resources and state-of-the-art equipment for different scientific tasks in the areas of biochemistry and biophysics.
In the area of socio-physics, different experiments (onsite and online) to study human behavior are conducted by BIFI members. The main purpose is to analyze the behavioral rules and mechanisms that promote the emergence of cooperation in humans. Through the simulation of increasingly realistic scenarios, important conclusions on how individuals behave when dealing with certain social dilemmas like climate change are also drawn. The results of these studies eventually allow policy-makers and governmental institutions to evaluate and redesign economic, social and cooperation policies more efficiently. For this purpose, it has its own software and a pool of more than 6000 volunteers (Nectunt).
A supercomputer is a type of computer with a high level of performance as compared to a general-purpose computer. The performance of a supercomputer is commonly measured in floating-point operations per second (FLOPS) instead of million instructions per second (MIPS). Since 2022, supercomputers have existed which can perform over 1018 FLOPS, so called exascale supercomputers. For comparison, a desktop computer has performance in the range of hundreds of gigaFLOPS (1011) to tens of teraFLOPS (1013). Since November 2017, all of the world's fastest 500 supercomputers run on Linux-based operating systems. Additional research is being conducted in the United States, the European Union, Taiwan, Japan, and China to build faster, more powerful and technologically superior exascale supercomputers.
Blue Gene was an IBM project aimed at designing supercomputers that can reach operating speeds in the petaFLOPS (PFLOPS) range, with relatively low power consumption.
High-performance computing (HPC) uses supercomputers and computer clusters to solve advanced computation problems.
Forschungszentrum Jülich (FZJ) is a German national research institution that pursues interdisciplinary research in the fields of energy, information, and bioeconomy. It operates a broad range of research infrastructures like supercomputers, an atmospheric simulation chamber, electron microscopes, a particle accelerator, cleanrooms for nanotechnology, among other things. Current research priorities include the structural change in the Rhineland lignite-mining region, hydrogen, and quantum technologies. As a member of the Helmholtz Association with roughly 6,800 employees in ten institutes and 80 subinstitutes, Jülich is one of the largest research institutions in Europe.
MareNostrum is the main supercomputer in the Barcelona Supercomputing Center. It is the most powerful supercomputer in Spain, one of thirteen supercomputers in the Spanish Supercomputing Network and one of the seven supercomputers of the European infrastructure PRACE.
EPCC, formerly the Edinburgh Parallel Computing Centre, is a supercomputing centre based at the University of Edinburgh. Since its foundation in 1990, its stated mission has been to accelerate the effective exploitation of novel computing throughout industry, academia and commerce.
The Pittsburgh Supercomputing Center (PSC) is a high performance computing and networking center founded in 1986 and one of the original five NSF Supercomputing Centers. PSC is a joint effort of Carnegie Mellon University and the University of Pittsburgh in Pittsburgh, Pennsylvania, United States.
The National Energy Research Scientific Computing Center (NERSC), is a high-performance computing (supercomputer) research facility that was founded in 1974. The National User Facility is operated by Lawrence Berkeley National Laboratory for the United States Department of Energy Office of Science.
The Spanish Supercomputing Network (RES) is a distributed infrastructure involving the interconnexion of 12 supercomputers which work together to offer High Performance Computing resources to the scientific community. It is coordinated by the Barcelona Supercomputing Center (BSC).
Finisterrae was the 100th supercomputer in Top500 ranking in November 2007. Running at 12.97 teraFLOPS, it would rank at position 258 on the list as of June 2008. It is also the third most powerful supercomputer in Spain. It was located in Galicia.
Ibercivis was a volunteer computing platform which allows internet users to participate in scientific research by donating unused computer cycles to run scientific simulations and other tasks. The original project, which became operational in 2008, was a scientific collaboration between the Portuguese and Spanish governments, but it is open to the general public and scientific community, both within and beyond the Iberian Peninsula. The project's name is a portmanteau of Iberia and the Latin word civis, meaning 'citizen'.
Pleiades is a petascale supercomputer housed at the NASA Advanced Supercomputing (NAS) facility at NASA's Ames Research Center located at Moffett Field near Mountain View, California. It is maintained by NASA and partners Hewlett Packard Enterprise and Intel.
Distributed European Infrastructure for Supercomputing Applications (DEISA) was a consortium of major national supercomputing centres in Europe. Initiated in 2002, it became a European Union funded supercomputer project. The consortium of eleven national supercomputing centres from seven European countries promoted pan-European research on European high-performance computing systems by creating a European collaborative environment in the area of supercomputing.
The National Center for Computational Sciences (NCCS) is a United States Department of Energy (DOE) Leadership Computing Facility that houses the Oak Ridge Leadership Computing Facility (OLCF), a DOE Office of Science User Facility charged with helping researchers solve challenging scientific problems of global interest with a combination of leading high-performance computing (HPC) resources and international expertise in scientific computing.
New York Blue is an 18 rack Blue Gene/L and a 2 rack Blue Gene/P massively parallel supercomputer based on the IBM system-on-chip technology. It is in the New York Center for Computational Sciences (NYCCS). The supercomputer is owned by Stony Brook University and is located at Brookhaven National Laboratory in Upton, Long Island, New York. The funds for this machine were provided by the New York state, with the leadership of the NYS Assembly. It began operating on July 15, 2007, when it was the fifth most powerful supercomputer dedicated to general research. According to Stony Brook provost Robert McGrath, it would also rank within the top 10 when including supercomputers available solely for military research. The renovation of the laboratory space holding the machine was supported by the State of New York and the U.S. DOE fund. As of June 2010, the Blue Gene/L was ranked 67th in the top 500 supercomputing rankings. Together with the Computational Center for Nanotechnology Innovations at Rensselaer Polytechnic Institute, New York Blue provides the New York state with more computing power available for general research than any state in the nation.
Several centers for supercomputing exist across Europe, and distributed access to them is coordinated by European initiatives to facilitate high-performance computing. One such initiative, the HPC Europa project, fits within the Distributed European Infrastructure for Supercomputing Applications (DEISA), which was formed in 2002 as a consortium of eleven supercomputing centers from seven European countries. Operating within the CORDIS framework, HPC Europa aims to provide access to supercomputers across Europe.
Yellowstone was the inaugural supercomputer at the NCAR-Wyoming Supercomputing Center (NWSC) in Cheyenne, Wyoming. It was installed, tested, and readied for production in the summer of 2012. The Yellowstone supercomputing cluster was decommissioned on December 31, 2017, being replaced by its successor Cheyenne.
The high performance supercomputing program started in mid-to-late 1980s in Pakistan. Supercomputing is a recent area of Computer science in which Pakistan has made progress, driven in part by the growth of the information technology age in the country. Developing on the ingenious supercomputer program started in 1980s when the deployment of the Cray supercomputers was initially denied.
The NCAR-Wyoming Supercomputing Center (NWSC) is a high-performance computing (HPC) and data archival facility located in Cheyenne, Wyoming, that provides advanced computing services to researchers in the Earth system sciences.
Enzo Marinari is an Italian theoretical and computational physicist. He has contributed to introducing several new algorithms in computational physics, such as Parallel Tempering, the SU(N) updating method and Constraint Allocation Flux Balance Analysis (CAFBA). He is a professor at the Physics Department of the Sapienza University of Rome.