Julia Bailey-Serres | |
|---|---|
| Occupation | University teacher  |
Julia Bailey-Serres is professor of genetics, director of the Center for Plant Cell Biology, and a member of the Institute for Integrative Genome Biology at the University of California, Riverside. Her accomplishments include the pioneering of methods for profiling the "translatomes" of discrete cell-types of plants and identification of a homeostatic sensor of oxygen deprivation in plants. [1]
Bailey-Serres received her Bachelor of Science degree from the University of Utah in 1981 and earned a Ph.D. with a thesis entitled "Mitochondrial genome rearrangements in sorghum" [2] from University of Edinburgh in 1986. She was a postdoctoral researcher at UC Berkeley under Michael Freeling. [1]
Bailey-Serres and her researchers are investigating the molecular and physiological processes that enable plants to tolerate or survive stresses such as flooding or drought. In general, her areas of research include:
In 2003, Bailey-Serres joined a team of geneticists including Pamela Ronald of the University of California, Davis and rice breeder David Mackill in the search for the Sub1A gene that allows rice to survive complete submergence under water. The gene is not present in all rice plants, but may be introduced through breeding. [12]
As a result of this research, scientists at the International Rice Research Institute (IRRI) created the flood-tolerant rice variety Swarna-Sub1. More than 10 million farmers are growing the rice in their flood-prone fields. [12]
From 2005 to 2011, Bailey-Serres was the director of the National Science Foundation's Integrative Graduate Education and Research Trainee Program (IGERT). The program trained 23 Ph.D. students versed in cell biology, chemistry, computational sciences and engineering, in advanced chemical genomics. [13]
Abiotic stress is the negative impact of non-living factors on the living organisms in a specific environment. The non-living variable must influence the environment beyond its normal range of variation to adversely affect the population performance or individual physiology of the organism in a significant way.
Rice is a cereal grain and in its domesticated form is the staple food of over half of the world's population, particularly in Asia and Africa. Rice is the seed of the grass species Oryza sativa —or, much less commonly, O. glaberrima. Asian rice was domesticated in China some 13,500 to 8,200 years ago; African rice was domesticated in Africa about 3,000 years ago. Rice has become commonplace in many cultures worldwide; in 2021, 787 million tons were produced, placing it fourth after sugarcane, maize, and wheat. Only some 8% of rice is traded internationally. China, India, and Indonesia are the largest consumers of rice. A substantial amount of the rice produced in developing nations is lost after harvest through factors such as poor transport and storage. Rice yields can be reduced by pests including insects, rodents, and birds, as well as by weeds, and by diseases such as rice blast. Traditional rice polycultures such as rice-duck farming, and modern integrated pest management seek to control damage from pests in a sustainable way.
A flash flood is a rapid flooding of low-lying areas: washes, rivers, dry lakes and depressions. It may be caused by heavy rain associated with a severe thunderstorm, hurricane, or tropical storm, or by meltwater from ice or snow flowing over ice sheets or snowfields. Flash floods may also occur after the collapse of a natural ice or debris dam, or a human structure such as a man-made dam, as occurred before the Johnstown Flood of 1889. Flash floods are distinguished from regular floods by having a timescale of fewer than six hours between rainfall and the onset of flooding.
Plant hormones are signal molecules, produced within plants, that occur in extremely low concentrations. Plant hormones control all aspects of plant growth and development, including embryogenesis, the regulation of organ size, pathogen defense, stress tolerance and reproductive development. Unlike in animals each plant cell is capable of producing hormones. Went and Thimann coined the term "phytohormone" and used it in the title of their 1937 book.
Hardiness of plants describes their ability to survive adverse growing conditions. It is usually limited to discussions of climatic adversity. Thus a plant's ability to tolerate cold, heat, drought, flooding, or wind are typically considered measurements of hardiness. Hardiness of plants is defined by their native extent's geographic location: longitude, latitude and elevation. These attributes are often simplified to a hardiness zone. In temperate latitudes, the term most often describes resistance to cold, or "cold-hardiness", and is generally measured by the lowest temperature a plant can withstand.
Rumex palustris, or marsh dock, is a plant species of the genus Rumex, found in Europe. The species is a dicot belonging to the family Polygonaceae. The species epithet palustris is Latin for "of the marsh" which indicates its common habitat.
Endothelial PAS domain-containing protein 1 is a protein that is encoded by the EPAS1 gene in mammals. It is a type of hypoxia-inducible factor, a group of transcription factors involved in the physiological response to oxygen concentration. The gene is active under hypoxic conditions. It is also important in the development of the heart, and for maintaining the catecholamine balance required for protection of the heart. Mutation often leads to neuroendocrine tumors.
Dehydrin (DHN) is a multi-family of proteins present in plants that is produced in response to cold and drought stress. DHNs are hydrophilic, reliably thermostable, and disordered. They are stress proteins with a high number of charged amino acids that belong to the Group II Late Embryogenesis Abundant (LEA) family. DHNs are primarily found in the cytoplasm and nucleus but more recently, they have been found in other organelles, like mitochondria and chloroplasts.
Genetically modified rice are rice strains that have been genetically modified. Rice plants have been modified to increase micronutrients such as vitamin A, accelerate photosynthesis, tolerate herbicides, resist pests, increase grain size, generate nutrients, flavors or produce human proteins.
Waterlogging water is the saturation of soil with water. Soil may be regarded as waterlogged when it is nearly saturated with water much of the time such that its air phase is restricted and anaerobic conditions prevail. In extreme cases of prolonged waterlogging, anaerobiosis occurs, the roots of mesophytes suffer, and the subsurface reducing atmosphere leads to such processes as denitrification, methanogenesis, and the reduction of iron and manganese oxides.
A genetically modified tomato, or transgenic tomato, is a tomato that has had its genes modified, using genetic engineering. The first trial genetically modified food was a tomato engineered to have a longer shelf life, which was on the market briefly beginning on May 21, 1994. The first direct consumption tomato was approved in Japan in 2021. Primary work is focused on developing tomatoes with new traits like increased resistance to pests or environmental stresses. Other projects aim to enrich tomatoes with substances that may offer health benefits or be more nutritious. As well as aiming to produce novel crops, scientists produce genetically modified tomatoes to understand the function of genes naturally present in tomatoes.
Deepwater rice are varieties of rice grown in flooded conditions with water more than 50 cm (20 in) deep for at least a month. More than 100 million people in Southeast Asia including Northeastern India rely on deepwater rice for their sustenance. Two adaptations permit the rice to thrive in deeper water, floating rice and traditional talls. Traditional talls are varieties that are grown at water depths between 50 and 100 cm and have developed to be taller and have longer leaves than standard rice. Floating rice grows in water deeper than 100 cm through advanced elongation ability. This means when a field where rice is growing floods, accelerated growth in the internodal of the stem allows the plant to keep some of its foliage on top of the water. The O. s. indica cultivar is the main type of deepwater rice, although varieties of O. s. japonica have been found in Burma and Assam Plains.
Organisms can live at high altitude, either on land, in water, or while flying. Decreased oxygen availability and decreased temperature make life at such altitudes challenging, though many species have been successfully adapted via considerable physiological changes. As opposed to short-term acclimatisation, high-altitude adaptation means irreversible, evolved physiological responses to high-altitude environments, associated with heritable behavioural and genetic changes. Among vertebrates, only few mammals and certain birds are known to have completely adapted to high-altitude environments.
Natural antisense short interfering RNA (natsiRNA) is a type of siRNA. They are endogenous RNA regulators which are between 21 and 24 nucleotides in length, and are generated from complementary mRNA transcripts which are further processed into siRNA.
Pamela Christine Ronald is an American plant pathologist and geneticist. She is a professor in the Department of Plant Pathology and conducts research at the Genome Center at the University of California, Davis and a member of the Innovative Genomics Institute at the University of California, Berkeley. She also serves as Director of Grass Genetics at the Joint BioEnergy Institute in Emeryville, California. In 2018 she served as a visiting professor at Stanford University in the Center on Food Security and the Environment.
Fish are exposed to large oxygen fluctuations in their aquatic environment since the inherent properties of water can result in marked spatial and temporal differences in the concentration of oxygen. Fish respond to hypoxia with varied behavioral, physiological, and cellular responses to maintain homeostasis and organism function in an oxygen-depleted environment. The biggest challenge fish face when exposed to low oxygen conditions is maintaining metabolic energy balance, as 95% of the oxygen consumed by fish is used for ATP production releasing the chemical energy of nutrients through the mitochondrial electron transport chain. Therefore, hypoxia survival requires a coordinated response to secure more oxygen from the depleted environment and counteract the metabolic consequences of decreased ATP production at the mitochondria.
Leymus mollis is a species of grass known by the common names American dune grass, American dune wild-rye, sea lyme-grass, strand-wheat, and strand grass. Its Japanese name is hamaninniku. It is native to Asia, where it occurs in Japan, China, Korea, and Russia, and northern parts of North America, where it occurs across Canada and the northern United States, as well as Greenland. It can also be found in Iceland.
Gaseous signaling molecules are gaseous molecules that are either synthesized internally (endogenously) in the organism, tissue or cell or are received by the organism, tissue or cell from outside and that are used to transmit chemical signals which induce certain physiological or biochemical changes in the organism, tissue or cell. The term is applied to, for example, oxygen, carbon dioxide, sulfur dioxide, nitrous oxide, hydrogen cyanide, ammonia, methane, hydrogen, ethylene, etc.
Phytoglobins are globular plant proteins classified into the globin superfamily, which contain a heme, i.e. protoporphyrin IX-Fe, prosthetic group. The earliest known phytoglobins are leghemoglobins, discovered in 1939 by Kubo after spectroscopic and chemical analysis of the red pigment of soybean root nodules. A few decades after Kubo's report the crystallization of a lupin phytoglobin by Vainshtein and collaborators revealed that the tertiary structure of this protein and that of the sperm whale myoglobin was remarkably similar, thus indicating that the phytoglobin discovered by Kubo did indeed correspond to a globin.
Ethylene (CH
2=CH
2) is an unsaturated hydrocarbon gas (alkene) acting as a naturally occurring plant hormone. It is the simplest alkene gas and is the first gas known to act as hormone. It acts at trace levels throughout the life of the plant by stimulating or regulating the ripening of fruit, the opening of flowers, the abscission (or shedding) of leaves and, in aquatic and semi-aquatic species, promoting the 'escape' from submergence by means of rapid elongation of stems or leaves. This escape response is particularly important in rice farming. Commercial fruit-ripening rooms use "catalytic generators" to make ethylene gas from a liquid supply of ethanol. Typically, a gassing level of 500 to 2,000 ppm is used, for 24 to 48 hours. Care must be taken to control carbon dioxide levels in ripening rooms when gassing, as high temperature ripening (20 °C; 68 °F) has been seen to produce CO2 levels of 10% in 24 hours.