Seismology is the scientific study of earthquakes and the propagation of elastic waves through the Earth or other planetary bodies. It also includes studies of earthquake environmental effects such as tsunamis as well as diverse seismic sources such as volcanic, tectonic, glacial, fluvial, oceanic, atmospheric, and artificial processes such as explosions. A related field that uses geology to infer information regarding past earthquakes is paleoseismology. A recording of Earth motion as a function of time is called a seismogram. A seismologist is a scientist who does research in seismology.
Reproducibility, closely related to replicability and repeatability, is a major principle underpinning the scientific method. For the findings of a study to be reproducible means that results obtained by an experiment or an observational study or in a statistical analysis of a data set should be achieved again with a high degree of reliability when the study is replicated. There are different kinds of replication but typically replication studies involve different researchers using the same methodology. Only after one or several such successful replications should a result be recognized as scientific knowledge.
DNA computing is an emerging branch of unconventional computing which uses DNA, biochemistry, and molecular biology hardware, instead of the traditional electronic computing. Research and development in this area concerns theory, experiments, and applications of DNA computing. Although the field originally started with the demonstration of a computing application by Len Adleman in 1994, it has now been expanded to several other avenues such as the development of storage technologies, nanoscale imaging modalities, synthetic controllers and reaction networks, etc.
Folding@home is a distributed computing project aimed to help scientists develop new therapeutics for a variety of diseases by the means of simulating protein dynamics. This includes the process of protein folding and the movements of proteins, and is reliant on simulations run on volunteers' personal computers. Folding@home is currently based at the University of Pennsylvania and led by Greg Bowman, a former student of Vijay Pande.
In computer programming, an entry point is the place in a program where the execution of a program begins, and where the program has access to command line arguments.
Linux is a family of open-source Unix-like operating systems based on the Linux kernel, an operating system kernel first released on September 17, 1991, by Linus Torvalds. Linux is typically packaged as a Linux distribution (distro), which includes the kernel and supporting system software and libraries, many of which are provided by the GNU Project. Many Linux distributions use the word "Linux" in their name, but the Free Software Foundation uses and recommends the name "GNU/Linux" to emphasize the use and importance of GNU software in many distributions, causing some controversy.
SymPy is an open-source Python library for symbolic computation. It provides computer algebra capabilities either as a standalone application, as a library to other applications, or live on the web as SymPy Live or SymPy Gamma. SymPy is simple to install and to inspect because it is written entirely in Python with few dependencies. This ease of access combined with a simple and extensible code base in a well known language make SymPy a computer algebra system with a relatively low barrier to entry.
Seismic Unix is an open source seismic utilities package which was supported by the Center for Wave Phenomena (CWP) at the Colorado School of Mines (CSM). Currently it is supported by John Stockwell.
Agent-based models have many applications in biology, primarily due to the characteristics of the modeling method. Agent-based modeling is a rule-based, computational modeling methodology that focuses on rules and interactions among the individual components or the agents of the system. The goal of this modeling method is to generate populations of the system components of interest and simulate their interactions in a virtual world. Agent-based models start with rules for behavior and seek to reconstruct, through computational instantiation of those behavioral rules, the observed patterns of behavior.
The index of physics articles is split into multiple pages due to its size.
Julia is a high-level, general-purpose dynamic programming language, most commonly used for numerical analysis and computational science. Distinctive aspects of Julia's design include a type system with parametric polymorphism and the use of multiple dispatch as a core programming paradigm, efficient garbage collection, and a just-in-time (JIT) compiler.
Open energy system models are energy system models that are open source. However, some of them may use third party proprietary software as part of their workflows to input, process, or output data. Preferably, these models use open data, which facilitates open science.
Gene set enrichment analysis (GSEA) (also called functional enrichment analysis or pathway enrichment analysis) is a method to identify classes of genes or proteins that are over-represented in a large set of genes or proteins, and may have an association with different phenotypes (e.g. different organism growth patterns or diseases). The method uses statistical approaches to identify significantly enriched or depleted groups of genes. Transcriptomics technologies and proteomics results often identify thousands of genes which are used for the analysis.
Since the advent of differential privacy, a number of systems supporting differentially private data analyses have been implemented and deployed. This article tracks real-world deployments, production software packages, and research prototypes.
CovidSim is an epidemiological model for COVID-19 developed by Imperial College COVID-19 Response Team, led by Neil Ferguson. The Imperial College study addresses the question: If complete suppression is not feasible, what is the best strategy combining incomplete suppression and control that is feasible and leads to acceptable outcomes?
