Novosphingobium

Last updated

Novosphingobium
Scientific classification Red Pencil Icon.png
Domain: Bacteria
Phylum: Pseudomonadota
Class: Alphaproteobacteria
Order: Sphingomonadales
Family: Erythrobacteraceae
Genus: Novosphingobium
Takeuchi et al. 2001 [1]
Species

See text

Novosphingobium is a genus of Gram-negative bacteria that includes N. taihuense, which can degrade aromatic compounds such as phenol, aniline, nitrobenzene and phenanthrene. [2] The species N. aromativorans, which was first found in Ulsan Bay, similarly degrades aromatic molecules of two to five rings. [3]

Contents

Species

Accepted Species

Novosphingobium comprises the following species: [4]

Provisional Species

The following species names have been published, but not validated according to the Bacteriological Code: [4]

Related Research Articles

<span class="mw-page-title-main">Nanoarchaeota</span> Phylum of archaea

Nanoarchaeota is a proposed phylum in the domain Archaea that currently has only one representative, Nanoarchaeum equitans, which was discovered in a submarine hydrothermal vent and first described in 2002.

<i>Pseudomonas</i> Genus of Gram-negative bacteria

Pseudomonas is a genus of Gram-negative bacteria belonging to the family Pseudomonadaceae in the class Gammaproteobacteria. The 313 members of the genus demonstrate a great deal of metabolic diversity and consequently are able to colonize a wide range of niches. Their ease of culture in vitro and availability of an increasing number of Pseudomonas strain genome sequences has made the genus an excellent focus for scientific research; the best studied species include P. aeruginosa in its role as an opportunistic human pathogen, the plant pathogen P. syringae, the soil bacterium P. putida, and the plant growth-promoting P. fluorescens, P. lini, P. migulae, and P. graminis.

Paracoccus is a genus of bacteria in the family Rhodobacteraceae.

<i>Arcanobacterium</i> Genus of bacteria

Arcanobacterium is a genus of bacteria. They are gram-positive, non–acid fast, nonmotile, facultatively anaerobic, and non–endospore forming. They are widely distributed in nature in the microbiota of animals and are mostly innocuous. Some can cause disease in humans and other animals. As with various species of a microbiota, they usually are not pathogenic but can occasionally opportunistically capitalize on atypical access to tissues or weakened host defenses.

<i>Microbacterium</i> Genus of bacteria

Microbacterium is a genus of bacteria in the family Microbacteriaceae. Microbacteria are common contaminants of laboratory reagents, which can lead to their being misrepresented in microbiome data.

<i>Deinococcus</i> Genus of bacteria

Deinococcus is in the monotypic family Deinococcaceae, and one genus of three in the order Deinococcales of the bacterial phylum Deinococcota highly resistant to environmental hazards. These bacteria have thick cell walls that give them Gram-positive stains, but they include a second membrane and so are closer in structure to Gram-negative bacteria. Deinococcus survive when their DNA is exposed to high doses of gamma and UV radiation. Whereas other bacteria change their structure in the presence of radiation, such as by forming endospores, Deinococcus tolerate it without changing their cellular form and do not retreat into a hardened structure. They are also characterized by the presence of the carotenoid pigment deinoxanthin that give them their pink color. They are usually isolated according to these two criteria. In August 2020, scientists reported that bacteria from Earth, particularly Deinococcus bacteria, were found to survive for three years in outer space, based on studies conducted on the International Space Station. These findings support the notion of panspermia, the hypothesis that life exists throughout the Universe, distributed in various ways, including space dust, meteoroids, asteroids, comets, planetoids or contaminated spacecraft.

<i>Pseudonocardia</i> Genus of bacteria

Pseudonocardia is the type genus of the bacteria family Pseudonocardiaceae. Members of this genus have been found living mutualistically on the cuticle of the leafcutter ants because the bacteria has antibiotic properties that protect the fungus grown by the ants. When they are grooming, their legs are passed over their mouth gland that produces the antibiotic and then their legs touch the fungi while they are walking around. The ants have metapleural glands that produce the antimicrobial components to eliminate the Escovopsis fungi. The bacteria may also be found in crypts on the propleural plate. Pseudonocardia is found to have antibiotic properties provided to the leaf-cutter ant to inhibit the growth of Escovopsis, which is a black yeast that parasitizes the leaf-cutter ant. Pseudonocardia can be found in both aquatic and terrestrial ecosystems. Pseudonocardia belongs to the phylum Actinobacteria. Most Actinobacteria grow in soils that are of a neutral pH. Actinobacteria are also important in plant-associated microbial communities are referred to as "free-living." This means that they are not dependent on another organism to live. For example: A non-free-living organism would be a parasite that depends on a host as a food source and a place for shelter. "Free-living" also allows these organisms to require less energy and food for survival. Pseudonocardia is catalase-positive, non-motile, aerobic and a non-acid-fasting bacteria and produces a gram positive reaction. Under the microscope they exhibit branching, rod-shaped organisms.
There are many different strains of Pseudonocardia and a good portion of these strains have been found in China, in soils of the forest, and in Eucalyptus trees of Australia.

Luteimonas composti is a moderately thermophilic, yellow-pigmented bacterium. It is Gram-negative and rod-shaped, with type strain CC-YY255(T).

Sphingomonas stygia is a species of bacteria. It is an aromatic compound-degrading bacteria, it is gram-negative, non-spore-forming, non-motile and rod-shaped. It is found in deep-terrestrial-subsurface sediments.

Elizabethkingia endophytica is a slightly yellow Gram-stain-negative rod-shaped bacterial strain isolated from the stem of healthy 10-day-old sweet corn . A comparison of the 16S rRNA gene sequence of the isolate showed 99.1, 97.8, and 97.4% similarity to the 16S rRNA gene sequences of the type strains of Elizabethkingia anophelis, Elizabethkingia meningoseptica and Elizabethkingia miricola, respectively. DNA-DNA hybridization indicated that the strain is representative of a new species.

Pararhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Some species of Pararhizobium form an endosymbiotic nitrogen-fixing association with roots of legumes.

Nocardioides is a Gram-positive, mesophilic and aerobic bacterial genus from the family of Nocardioidaceae.

The Coriobacteriia are a class of Gram-positive bacteria within the Actinomycetota phylum. Species within this group are nonsporulating, strict or facultative anaerobes that are capable of thriving in a diverse set of ecological niches. Gordonibacter species are the only members capable of motility by means of flagella within the class. Several species within the Coriobacteriia class have been implicated with human diseases that range in severity. Atopobium, Olsenella, and Cryptobacterium species have responsible for human oral infections including periodontitis, halitosis, and other endodontic infections. Eggerthella species have been associated with severe blood bacteraemia and ulcerative colitis.

Dyadobacter is a genus of gram negative rod-shaped bacteria belonging to the family Spirosomaceae in the phylum Bacteroidota. Typical traits of the genus include yellow colony colour, positive flexirubin test and non-motile behaviours. They possess an anaerobic metabolism, can utilise a broad range of carbon sources, and test positive for peroxide catalase activity. The type species is Dyadobacter fermentans, which was isolated from surface sterilised maize leaves,.

Novosphingobium aromaticivorans is a species of bacteria. It is an aromatic compound-degrading bacteria, it is gram-negative, non-spore-forming, non-motile and rod-shaped. It is found in deep-terrestrial-subsurface sediments.

Brachybacterium is a genus of Gram positive, nonmotile bacteria. The cells are coccoid during the stationary phase, and irregular rods during the exponential phase. The genus name comes from Greek word brachy, meaning short, and Latin bacterium, meaning rods, referencing the short rods noted during the exponential phase.

Coprothermobacterota is a phylum of nonmotile, rod-shaped bacteria.

Chitinophagaceae is an aerobic or facultatively anaerobic and rod-shaped family of bacteria in the phylum Bacteroidota.

Prolixibacteraceae is a family of 11 bacterial genera in the order of Bacteroidales.

References

  1. Takeuchi M, Hamana K, Hiraishi A (2001). "Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses". Int J Syst Evol Microbiol. 51 (Pt 4): 1405–1417. doi: 10.1099/00207713-51-4-1405 . PMID   11491340.
  2. Z.P. Liu; B.J. Wang; Y.H. Liu; S.J. Liu (May 2005). "Novosphingobium taihuense sp nov., a novel aromatic-compound-degrading bacterium isolated from Lake Tai, China". Int. J. Syst. Evol. Microbiol. 55 (Pt 3): 1229–1232. doi: 10.1099/ijs.0.63468-0 . PMID   15879260.
  3. J.H. Sohn; K.K. Kwon; J.-H. Kang; H.-B. Jung; S.-J. Kim (2004). "Novosphingobium pentaromativorans sp. nov., a high-molecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from estuarine sediment". Int. J. Syst. Evol. Microbiol. 54 (Pt 5): 1483–1487. doi: 10.1099/ijs.0.02945-0 . PMID   15388699.
  4. 1 2 Euzéby JP, Parte AC. "Novosphingobium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 5, 2021.