PLOS Pathogens

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Journal

Scope

The journal scope of PLOS Pathogens is to feature PLOS Pathogens publishes original research and commentary that significantly advance the understanding of pathogens and how they interact with their host organisms.[ citation needed ]

Topics include (but are not limited to) adaptive and innate immune defenses as well as pathogen countermeasures, emerging pathogens, evolution, genomics and gene regulation, model host organisms, pathogen-cell biology, pathogenesis, prions, proteomics and signal transduction, rational vaccine design, structural biology, and virulence factors. [1]

Content

PLOS Pathogens publishes primary research articles, Pearls, Research Matters, Reviews, Opinions and occasional Editorials. [2]

Metrics

PLOS supports DORA – the San Francisco Declaration on Research Assessment and uses Article-Level Metrics (ALMs) to measure the impact of articles based on their merits rather than using the journal impact factor. Traditionally, the impact of research articles has been measured by the publication journal, but this particular view examines the overall performance and reach of the articles themselves. ALMs are noted on each article to mark how often they are viewed, cited, saved, discussed/shared or recommended in order to assess work at the article level.[ citation needed ]

ALMs are available, upon publication, for every article published by PLOS. [3]

Abstracting and Indexing

PLOS Pathogens is indexed in PubMed, MEDLINE, Chemical Abstracts Service (CAS), EMBASE, EMBASE, SCOPUS, Zoological Record, and Web of Science. [4]

Open Access

PLOS Pathogens publishes under the Open Access license PLOS applies to all its published works, the Creative Commons Attribution license [5] (CC BY).

PLOS Pathogens Business Model

PLOS's business model requires in most cases that authors pay publication fees. PLOS provides individual and institutional fee support programs through its Global Participation Initiatives, Publication Fee Assistance and Institutional Fee Support. [6]

Measures of Impact

PLOS Pathogens uses Article-Level Metrics (ALMs) to measure the influence of articles based on their individual merits rather than using the journal impact factor. A signpost in the upper right of every article provides summary metrics of citations, views, shares and bookmarks. [7]

Related Research Articles

<span class="mw-page-title-main">Scientific journal</span> Periodical journal publishing scientific research

In academic publishing, a scientific journal is a periodical publication intended to further the progress of science, usually by sharing findings from research with readers. They are normally specialized based on discipline, with authors picking which one they send their manuscripts to.

<span class="mw-page-title-main">Academic publishing</span> Subfield of publishing which distributes academic research and scholarship

Academic publishing is the subfield of publishing which distributes academic research and scholarship. Most academic work is published in academic journal articles, books or theses. The part of academic written output that is not formally published but merely printed up or posted on the Internet is often called "grey literature". Most scientific and scholarly journals, and many academic and scholarly books, though not all, are based on some form of peer review or editorial refereeing to qualify texts for publication. Peer review quality and selectivity standards vary greatly from journal to journal, publisher to publisher, and field to field.

<span class="mw-page-title-main">Academic journal</span> Peer-reviewed scholarly periodical

An academic journal or scholarly journal is a periodical publication in which scholarship relating to a particular academic discipline is published. Academic journals serve as permanent and transparent forums for the presentation, scrutiny, and discussion of research. They nearly universally require peer review or other scrutiny from contemporaries competent and established in their respective fields. Content typically takes the form of articles presenting original research, review articles, or book reviews. The purpose of an academic journal, according to Henry Oldenburg, is to give researchers a venue to "impart their knowledge to one another, and contribute what they can to the Grand design of improving natural knowledge, and perfecting all Philosophical Arts, and Sciences."

<span class="mw-page-title-main">Open access</span> Research publications distributed freely online

Open access (OA) is a set of principles and a range of practices through which research outputs are distributed online, free of access charges or other barriers. Under some models of open access publishing, barriers to copying or reuse are also reduced or removed by applying an open license for copyright.

PLOS Biology is a monthly peer-reviewed scientific journal covering all aspects of biology. Publication began on October 13, 2003. It is the first journal published by the Public Library of Science. The editor-in-chief is Nonia Pariente.

BioMed Central (BMC) is a United Kingdom-based, for-profit scientific open access publisher that produces over 250 scientific journals. All its journals are published online only. BioMed Central describes itself as the first and largest open access science publisher. It was founded in 2000 and has been owned by Springer, now Springer Nature, since 2008.

The impact factor (IF) or journal impact factor (JIF) of an academic journal is a scientometric index calculated by Clarivate that reflects the yearly mean number of citations of articles published in the last two years in a given journal, as indexed by Clarivate's Web of Science.

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Citation impact or citation rate is a measure of how many times an academic journal article or book or author is cited by other articles, books or authors. Citation counts are interpreted as measures of the impact or influence of academic work and have given rise to the field of bibliometrics or scientometrics, specializing in the study of patterns of academic impact through citation analysis. The importance of journals can be measured by the average citation rate, the ratio of number of citations to number articles published within a given time period and in a given index, such as the journal impact factor or the citescore. It is used by academic institutions in decisions about academic tenure, promotion and hiring, and hence also used by authors in deciding which journal to publish in. Citation-like measures are also used in other fields that do ranking, such as Google's PageRank algorithm, software metrics, college and university rankings, and business performance indicators.

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Journal Citation Reports (JCR) is an annual publication by Clarivate. It has been integrated with the Web of Science and is accessed from the Web of Science Core Collection. It provides information about academic journals in the natural and social sciences, including impact factors. The JCR was originally published as a part of the Science Citation Index. Currently, the JCR, as a distinct service, is based on citations compiled from the Science Citation Index Expanded and the Social Sciences Citation Index. As of the 2023 edition, journals from the Arts and Humanities Citation Index and the Emerging Sources Citation Index will also be included.

<i>Journal of General Virology</i> Academic journal

Journal of General Virology is a not-for-profit peer-reviewed scientific journal published by the Microbiology Society. The journal was established in 1967 and covers research into animal, insect and plants viruses, also fungal viruses, prokaryotic viruses, and TSE agents. Antiviral compounds and clinical aspects of virus infection are also covered.

<i>Journal of Rehabilitation Research and Development</i> Academic journal

The Journal of Rehabilitation Research and Development was a peer-reviewed open access medical journal published by the Rehabilitation Research and Development Service of the Veterans Health Administration Office of Research and Development. It covered research on rehabilitation medicine. It published ten issues in print and electronic formats each year. The journal's website contains the full archive dating back to 1964. The journal was established in 1964 as the Bulletin of Prosthetics Research, obtaining its latest name in 1983. In 2017, the journal announced that it would cease publication, to be replaced with a community organised through the open access publisher PLOS.

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<i>PeerJ</i> Academic journal

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<span class="mw-page-title-main">Altmetrics</span>

In scholarly and scientific publishing, altmetrics are non-traditional bibliometrics proposed as an alternative or complement to more traditional citation impact metrics, such as impact factor and h-index. The term altmetrics was proposed in 2010, as a generalization of article level metrics, and has its roots in the #altmetrics hashtag. Although altmetrics are often thought of as metrics about articles, they can be applied to people, journals, books, data sets, presentations, videos, source code repositories, web pages, etc.

An article processing charge (APC), also known as a publication fee, is a fee which is sometimes charged to authors. Most commonly, it is involved in making a work available as open access (OA), in either a full OA journal or in a hybrid journal. This fee may be paid by the author, the author's institution, or their research funder. Sometimes, publication fees are also involved in traditional journals or for paywalled content. Some publishers waive the fee in cases of hardship or geographic location, but this is not a widespread practice. An article processing charge does not guarantee that the author retains copyright to the work, or that it will be made available under a Creative Commons license.

Article-level metrics are citation metrics which measure the usage and impact of individual scholarly articles.

The Office of Portfolio Analysis was established in the Division of Program Coordination, Planning, and Strategic Initiatives in 2011 to assist NIH Institutes and Centers with scientific portfolio analysis. Per the Federal Register, the Office of Portfolio Analysis serves the following goals:

  1. Prepare and analyze data on NIH sponsored biomedical research to inform trans-NIH planning and coordination;
  2. Serve as a resource for portfolio management at the programmatic level;
  3. Employ databases, analytic tools, methodologies and other resources to conduct assessments in support of portfolio analyses and priority setting in scientific areas of interest across NIH;
  4. Research and develop new analytic tools, support systems, and specifications for new resources in coordination with other NIH organizations to enhance the management of the NIH's scientific portfolio; and
  5. Provide, in coordination with other NIH organizations, training on portfolio analysis tools, procedures, and methodology.

References

  1. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-04-16.
  2. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-01-09.
  3. Eldermire, Erin. "LibGuides: Measuring your research impact: PLoS Article-Level Metrics". guides.library.cornell.edu. Retrieved 2018-04-16.
  4. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-01-09.
  5. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-01-09.
  6. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-01-09.
  7. "PLOS Pathogens: A Peer-Reviewed Open-Access Journal". journals.plos.org. Retrieved 2018-01-09.