Bakthan Singaram | |
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Alma mater | University of Madras |
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Bakthan Singaram is a professor of organic chemistry at the University of California, Santa Cruz in Santa Cruz, California, where he has taught since 1989. Singaram's primary focus is in the area of boron-based organic chemistry. He gained his Ph.D. from the University of Madras, Tamil Nadu, India in 1977. Singaram also worked in and directed the laboratory of Nobel Prize-winning chemist Herbert Brown, who shared the 1979 Nobel prize in chemistry 1979 with Georg Wittig "for their development of the use of boron- and phosphorus-containing compounds, respectively, into important reagents in organic synthesis". [1] Singaram then left the Brown research group to take a position as an assistant professor in 1989 at the University of California, Santa Cruz, where he remains today. Singaram has also acted as a visiting professor at several universities, such as the University of Puerto Rico and the University of Rennes 1 in Rennes, France. Most recently, he received an award from The Boron in the Americas (BORAM) Organization presented at the Regular BORAM Awards in June 2012. [2] [3]
Singaram's laboratory is interested in the synthesis and reactions in boron-containing molecules as well as in the development of asymmetric and stereoselective methods for the synthesis of organic molecules.
As of 2000 [update] , Singaram was developing a glucose sensor based on boronic acids which might lead to an implantable diagnostic tool for continuous glucose detection for persons afflicted with diabetes mellitus. [4] Carbohydrates and their derivatives, including saccharides, phosphosugars, and nucleotides, are ubiquitous metabolites in every organism. Sensitive probes for monitoring the presence of these metabolites provide researchers a powerful tool to elucidate biological processes. Diabetics monitor glucose by testing blood four or more times a day, obtained from finger pricks or other sampling method. Glucose levels can fluctuate widely throughout the day, making it difficult to determine when it is important to test the blood. There has been no way to continuously monitor those fluctuations over long periods. Our group has extensively developed fluorescent probes for metabolites including glucose, phosphosugars, and nucleotides. We have developed a two-component optical probe with a modular receptor scaffold. This small molecule probe is water-soluble, and operates in the blue-green region of the spectrum. Saccharide recognition in our probe system is achieved with a boronic acids appended viologen that serves as an analyte responsive fluorescence quencher. We used an anionic dye which forms a weakly fluorescent complex with the cationic viologen receptor. At and near physiological pH, saccharide binding by the receptor results in a partial charge neutralization of the viologen. This produces an increase in the fluorescent signal dependent on glucose concentration. Incorporating the probe into a hydrogel polymer allowed for continuous monitoring of glucose concentrations in the physiological range in vivo. In another application, an array of probes with differential selectivity was used to discriminate important carbohydrate metabolites in water in multiwell plates.
Lithium aminoborohydride (LAB) reagents are powerful reducing agents, comparable to lithium aluminum hydride (LAH) and Vitride, yet selective in their reducing properties. [5] They are thermally stable and much less water reactive than LAH and Vitride. LAB reagents reduce a wide range of functional groups: aldehydes, ketones, esters, lactones, amides, anhydrides, oximes, nitriles, epoxides and halides. These compounds are readily reduced in one hour or less at ambient temperature. Carboxylic acids are not reduced by LAB reagents. Some LAB reagents are available commercially from Sigma-Aldrich. [6]
In conjunction with their work on the LAB reagent, Singaram's laboratory developed the chiral lewis acid/asymmetric reducing agent TarB-X, [7] also known as "Singaram's reagent". [8] TarB-X is a derivative of tartaric acid and organo-borane compounds. TarBX may used as an inexpensive and efficient way to reduce aromatic alkyl ketones to enantiomerically pure secondary alcohols in conjunction with the use of the mild reducing agent sodium borohydride. TarB-X represents a new type of chiral Lewis acid and the authors note that "because the reagent is easily prepared, induces high enantioselectivity, and can be essentially fully recovered, the implications for its use in both industry and academia appear to be quite promising." [7]
Elias James Corey is an American organic chemist. In 1990, he won the Nobel Prize in Chemistry "for his development of the theory and methodology of organic synthesis", specifically retrosynthetic analysis. Regarded by many as one of the greatest living chemists, he has developed numerous synthetic reagents, methodologies and total syntheses and has advanced the science of organic synthesis considerably.
The aldol reaction is a reaction that combines two carbonyl compounds to form a new β-hydroxy carbonyl compound.
In organometallic chemistry, organolithium reagents are chemical compounds that contain carbon–lithium (C–Li) bonds. These reagents are important in organic synthesis, and are frequently used to transfer the organic group or the lithium atom to the substrates in synthetic steps, through nucleophilic addition or simple deprotonation. Organolithium reagents are used in industry as an initiator for anionic polymerization, which leads to the production of various elastomers. They have also been applied in asymmetric synthesis in the pharmaceutical industry. Due to the large difference in electronegativity between the carbon atom and the lithium atom, the C−Li bond is highly ionic. Owing to the polar nature of the C−Li bond, organolithium reagents are good nucleophiles and strong bases. For laboratory organic synthesis, many organolithium reagents are commercially available in solution form. These reagents are highly reactive, and are sometimes pyrophoric.
Enantioselective synthesis, also called asymmetric synthesis, is a form of chemical synthesis. It is defined by IUPAC as "a chemical reaction in which one or more new elements of chirality are formed in a substrate molecule and which produces the stereoisomeric products in unequal amounts."
The Corey–Itsuno reduction, also known as the Corey–Bakshi–Shibata (CBS) reduction, is a chemical reaction in which a prochiral ketone is enantioselectively reduced to produce the corresponding chiral, non-racemic alcohol. The oxazaborolidine reagent which mediates the enantioselective reduction of ketones was previously developed by the laboratory of Itsuno and thus this transformation may more properly be called the Itsuno-Corey oxazaborolidine reduction.
The CBS catalyst or Corey–Bakshi–Shibata catalyst is an asymmetric catalyst derived from proline. It finds many uses in organic reactions such as the CBS reduction, Diels-Alder reactions and (3+2) cycloadditions. Proline, a naturally occurring chiral compound, is readily and cheaply available. It transfers its stereocenter to the catalyst which in turn is able to drive an organic reaction selectively to one of two possible enantiomers. This selectivity is due to steric strain in the transition state that develops for one enantiomer but not for the other.
In stereochemistry, a chiral auxiliary is a stereogenic group or unit that is temporarily incorporated into an organic compound in order to control the stereochemical outcome of the synthesis. The chirality present in the auxiliary can bias the stereoselectivity of one or more subsequent reactions. The auxiliary can then be typically recovered for future use.
Lisofylline (LSF) is a synthetic small molecule with novel anti-inflammatory properties. LSF can effectively prevent type 1 diabetes in preclinical models and improves the function and viability of isolated or transplanted pancreatic islets. It is a metabolite of pentoxifylline.
Organozinc chemistry is the study of the physical properties, synthesis, and reactions of organozinc compounds, which are organometallic compounds that contain carbon (C) to zinc (Zn) chemical bonds.
A boronic acid is an organic compound related to boric acid in which one of the three hydroxyl groups is replaced by an alkyl or aryl group. As a compound containing a carbon–boron bond, members of this class thus belong to the larger class of organoboranes.
Prolinol is a chiral amino-alcohol that is used as a chiral building block in organic synthesis. It exists as two enantiomers: the D and L forms.
Diisopinocampheylborane is an organoborane that is useful for asymmetric synthesis. This colourless solid is the precursor to a range of related reagents. The compound was reported in 1961 by Zweifel and Brown in a pioneering demonstration of asymmetric synthesis using boranes. The reagent is mainly used for the synthesis of chiral secondary alcohols.
Borane dimethylsulfide (BMS) is a chemical compound with the chemical formula BH3·S(CH3)2. It is an adduct between borane molecule and dimethyl sulfide molecule. It is a complexed borane reagent that is used for hydroborations and reductions. The advantages of BMS over other borane reagents, such as borane-tetrahydrofuran, are its increased stability and higher solubility. BMS is commercially available at much higher concentrations than its tetrahydrofuran counterpart and does not require sodium borohydride as a stabilizer, which could result in undesired side reactions. In contrast, BH3·THF requires sodium borohydride to inhibit reduction of THF to tributyl borate. BMS is soluble in most aprotic solvents.
tert-Butanesulfinamide is an organosulfur compound and a member of the class of sulfinamides. Both enantiomeric forms are commercially available and are used in asymmetric synthesis as chiral auxiliaries, often as chiral ammonia equivalents for the synthesis of amines. tert-Butanesulfinamide and the associated synthetic methodology was introduced in 1997 by Jonathan A. Ellman et al.
In organic chemistry, carbonyl reduction is the organic reduction of any carbonyl group by a reducing agent.
Enantioselective ketone reductions convert prochiral ketones into chiral, non-racemic alcohols and are used heavily for the synthesis of stereodefined alcohols.
Reductions with hydrosilanes are methods used for hydrogenation and hydrogenolysis of organic compounds. The approach is a subset of ionic hydrogenation. In this particular method, the substrate is treated with a hydrosilane and auxiliary reagent, often a strong acid, resulting in formal transfer of hydride from silicon to carbon. This style of reduction with hydrosilanes enjoys diverse if specialized applications.
The Enders SAMP/RAMP hydrazone alkylation reaction is an asymmetric carbon-carbon bond formation reaction facilitated by pyrrolidine chiral auxiliaries. It was pioneered by E. J. Corey and D. Enders in 1976, and was further developed by D. Enders and his group. This method is usually a three-step sequence. The first step is to form the hydrazone between (S)-1-amino-2-methoxymethylpyrrolidine (SAMP) or (R)-1-amino-2-methoxymethylpyrrolidine (RAMP) and a ketone or aldehyde. Afterwards, the hydrazone is deprotonated by lithium diisopropylamide (LDA) to form an azaenolate, which reacts with alkyl halides or other suitable electrophiles to give alkylated hydrazone species with the simultaneous generation of a new chiral center. Finally, the alkylated ketone or aldehyde can be regenerated by ozonolysis or hydrolysis.
In organic chemistry, carbonyl allylation describes methods for adding an allyl anion to an aldehyde or ketone to produce a homoallylic alcohol. The carbonyl allylation was first reported in 1876 by Alexander Zaitsev and employed an allylzinc reagent.
In organic chemistry, the Davis oxidation or Davis' oxaziridine oxidation refers to oxidations involving the use of the Davis reagent or other similar oxaziridine reagents. This reaction mainly refers to the generation of α-hydroxy carbonyl compounds (acyloins) from ketones or esters. The reaction is carried out in a basic environment to generate the corresponding enolate from the ketone or ester. This reaction has been shown to work for amides.