IBIS-2 is the version 2 of the land-surface model Integrated Biosphere Simulator (IBIS), which includes several major improvements and additions to the prototype model developed by Foley et al. [1996]. IBIS was designed to explicitly link land surface and hydrological processes, terrestrial biogeochemical cycles, and vegetation dynamics within a single physically consistent framework [1]
The model considers transient changes in vegetation composition and structure in response to environmental change and is, therefore, classified as a Dynamic Global Vegetation Model (DGVM) [2] This new version of IBIS has improved representations of land surface physics, plant physiology, canopy phenology, plant functional type (PFT) differences, and carbon allocation. Furthermore, IBIS-2 includes a new belowground biogeochemistry submodel, which is coupled to detritus production (litterfall and fine root turnover). All process are organized in a hierarchical framework and operate at different time steps, ranging from 60 min to 1 year. Such an approach allows for explicit coupling among ecological, biophysical, and physiological processes occurring on different timescales.
The land surface module is based on the land surface transfer model (LSX) package of Thompson and Pollard, [3] and simulates the energy, water, carbon, and momentum balance of the soil-vegetation-atmosphere system. The model represents two vegetation canopies (e.g., trees versus shrubs and grasses), eight soil layers, and three layers of snow (when required). The solar radiative transfer scheme of IBIS-2 has been simplified in comparison with LSX and IBIS-1; sunlit and shaded fractions of the canopies are no longer treated separately. The model now follows the approach of Sellers et al. [1986] and Bonan [1995]. Infrared radiation is simulated as if each vegetation layer is a semitransparent plane; canopy emissivity depends on foliage density. Another difference between IBIS-2 and IBIS-1 and LSX, is that IBIS-2 uses an empirical linear function of wind speed to estimate turbulent transfer between the soil surface and the lower vegetation canopy, and IBIS-1 and LSX use a logarithmic wind profile. The total evapotranspiration from the land surface is treated as the sum of three water vapor fluxes: evaporation from the soil surface, evaporation of water intercepted by vegetation canopies, and canopy transpiration.
IBIS simulates the variations of heat and moisture in the soil. The eight layers are described in terms of soil temperature, volumetric water content and ice content. [4] All the process occurring in the soil are influenced by the soil texture and amount of organic matter within the soil. One difference from the physiological processes in the previous version of the model is that IBIS-1 calculates the maximum Rubisco carboxylation capacity (Vm) by optimizing the net assimilation of carbon by the leaf. [5] IBIS-2 prescribes constant values of Vm for the plant functional typed (PFT). To scale photosynthesis and transpiration from the leaf level to canopy level, IBIS-2 assumes that the net photosynthesis within the canopy is proportional to the APAR within it.
In the original version of IBIS [6] there was no explicit below ground biogeochemistry model to complete flow of carbon between the vegetation, detritus, and soil organic matter pools. IBIS-2 includes a new soil biogeochemistry module. [7]
Soil science is the study of soil as a natural resource on the surface of the Earth including soil formation, classification and mapping; physical, chemical, biological, and fertility properties of soils; and these properties in relation to the use and management of soils.
Soil erosion is the denudation or wearing away of the upper layer of soil. It is a form of soil degradation. This natural process is caused by the dynamic activity of erosive agents, that is, water, ice (glaciers), snow, air (wind), plants, and animals. In accordance with these agents, erosion is sometimes divided into water erosion, glacial erosion, snow erosion, wind (aeolian) erosion, zoogenic erosion and anthropogenic erosion such as tillage erosion. Soil erosion may be a slow process that continues relatively unnoticed, or it may occur at an alarming rate causing a serious loss of topsoil. The loss of soil from farmland may be reflected in reduced crop production potential, lower surface water quality and damaged drainage networks. Soil erosion could also cause sinkholes.
In ecology, primary production is the synthesis of organic compounds from atmospheric or aqueous carbon dioxide. It principally occurs through the process of photosynthesis, which uses light as its source of energy, but it also occurs through chemosynthesis, which uses the oxidation or reduction of inorganic chemical compounds as its source of energy. Almost all life on Earth relies directly or indirectly on primary production. The organisms responsible for primary production are known as primary producers or autotrophs, and form the base of the food chain. In terrestrial ecoregions, these are mainly plants, while in aquatic ecoregions algae predominate in this role. Ecologists distinguish primary production as either net or gross, the former accounting for losses to processes such as cellular respiration, the latter not.
Biogeochemistry is the scientific discipline that involves the study of the chemical, physical, geological, and biological processes and reactions that govern the composition of the natural environment. In particular, biogeochemistry is the study of biogeochemical cycles, the cycles of chemical elements such as carbon and nitrogen, and their interactions with and incorporation into living things transported through earth scale biological systems in space and time. The field focuses on chemical cycles which are either driven by or influence biological activity. Particular emphasis is placed on the study of carbon, nitrogen, oxygen, sulfur, iron, and phosphorus cycles. Biogeochemistry is a systems science closely related to systems ecology.
The pedosphere is the outermost layer of the Earth that is composed of soil and subject to soil formation processes. It exists at the interface of the lithosphere, atmosphere, hydrosphere and biosphere. The pedosphere is the skin of the Earth and only develops when there is a dynamic interaction between the atmosphere, biosphere, lithosphere and the hydrosphere. The pedosphere is the foundation of terrestrial life on Earth.
Ecosystem ecology is the integrated study of living (biotic) and non-living (abiotic) components of ecosystems and their interactions within an ecosystem framework. This science examines how ecosystems work and relates this to their components such as chemicals, bedrock, soil, plants, and animals.
Ecohydrology is an interdisciplinary scientific field studying the interactions between water and ecological systems. It is considered a sub discipline of hydrology, with an ecological focus. These interactions may take place within water bodies, such as rivers and lakes, or on land, in forests, deserts, and other terrestrial ecosystems. Areas of research in ecohydrology include transpiration and plant water use, adaption of organisms to their water environment, influence of vegetation and benthic plants on stream flow and function, and feedbacks between ecological processes, the soil carbon sponge and the hydrological cycle.
The eddy covariance is a key atmospheric measurement technique to measure and calculate vertical turbulent fluxes within atmospheric boundary layers. The method analyses high-frequency wind and scalar atmospheric data series, gas, energy, and momentum, which yields values of fluxes of these properties. It is a statistical method used in meteorology and other applications to determine exchange rates of trace gases over natural ecosystems and agricultural fields, and to quantify gas emissions rates from other land and water areas. It is frequently used to estimate momentum, heat, water vapour, carbon dioxide and methane fluxes.
Earth's climate system is a complex system with five interacting components: the atmosphere (air), the hydrosphere (water), the cryosphere, the lithosphere and the biosphere. Climate is the statistical characterization of the climate system. It represents the average weather, typically over a period of 30 years, and is determined by a combination of processes, such as ocean currents and wind patterns. Circulation in the atmosphere and oceans transports heat from the tropical regions to regions that receive less energy from the Sun. Solar radiation is the main driving force for this circulation. The water cycle also moves energy throughout the climate system. In addition, certain chemical elements are constantly moving between the components of the climate system. Two examples for these biochemical cycles are the carbon and nitrogen cycles.
The Max Planck Institute for Biogeochemistry is located in Jena, Germany. It was created in 1997, and moved into new buildings 2002. It is one of 86 institutes in the Max Planck Society.
The International Geosphere-Biosphere Programme (IGBP) was a research programme that ran from 1987 to 2015 dedicated to studying the phenomenon of global change. Its primary focus was coordinating "international research on global-scale and regional-scale interactions between Earth's biological, chemical and physical processes and their interactions with human systems."
A Dynamic Global Vegetation Model (DGVM) is a computer program that simulates shifts in potential vegetation and its associated biogeochemical and hydrological cycles as a response to shifts in climate. DGVMs use time series of climate data and, given constraints of latitude, topography, and soil characteristics, simulate monthly or daily dynamics of ecosystem processes. DGVMs are used most often to simulate the effects of future climate change on natural vegetation and its carbon and water cycles.
The carbonate–silicate geochemical cycle, also known as the inorganic carbon cycle, describes the long-term transformation of silicate rocks to carbonate rocks by weathering and sedimentation, and the transformation of carbonate rocks back into silicate rocks by metamorphism and volcanism. Carbon dioxide is removed from the atmosphere during burial of weathered minerals and returned to the atmosphere through volcanism. On million-year time scales, the carbonate-silicate cycle is a key factor in controlling Earth's climate because it regulates carbon dioxide levels and therefore global temperature.
DPHM-RS is a semi-distributed hydrologic model developed at University of Alberta, Canada.
Breeding for drought resistance is the process of breeding plants with the goal of reducing the impact of dehydration on plant growth.
The atmospheric carbon cycle accounts for the exchange of gaseous carbon compounds, primarily carbon dioxide, between Earth's atmosphere, the oceans, and the terrestrial biosphere. It is one of the faster components of the planet's overall carbon cycle, supporting the exchange of more than 200 billion tons of carbon in and out of the atmosphere throughout the course of each year. Atmospheric concentrations of CO2 remain stable over longer timescales only when there exists a balance between these two flows. Methane, Carbon monoxide (CO), and other human-made compounds are present in smaller concentrations and are also part of the atmospheric carbon cycle.
The Amazon Tall Tower Observatory or ATTO is a scientific research facility in the Amazon rainforest of Brazil. This includes a 325-metre-tall (1,066 ft) tower that extends far above the forest canopy and two 80-metre (260 ft) towers that allow researchers to collect samples from the soil surface to above the forest canopy. Additionally, there are climate-controlled containers for laboratory equipment and an office, a base camp and nearby sites for studying vegetation and soil processes. The tall research tower is one metre taller than the Eiffel Tower and is currently the tallest structure in South America. All towers are equipped with a broad range of instruments to measure chemical and physical properties of the atmosphere, such as greenhouse gas concentrations, aerosols and meteorological data.
Ecosystem Functional Type (EFT) is an ecological concept to characterize ecosystem functioning. Ecosystem Functional Types are defined as groups of ecosystems or patches of the land surface that share similar dynamics of matter and energy exchanges between the biota and the physical environment. The EFT concept is analogous to the Plant Functional Types (PFTs) concept, but defined at a higher level of the biological organization. As plant species can be grouped according to common functional characteristics, ecosystems can be grouped according to their common functional behavior.
(Iain) Colin Prentice holds the AXA chair in biosphere and climate impacts at Imperial College London and an honorary chair in ecology and evolution at Macquarie University in Australia.
BAITSSS is biophysical Evapotranspiration (ET) computer model that determines water use, primarily in agriculture landscape, using remote sensing-based information. It was developed and refined by Ramesh Dhungel and the water resources group at University of Idaho's Kimberly Research and Extension Center since 2010. It has been used in different areas in the United States including Southern Idaho, Northern California, northwest Kansas, Texas, and Arizona.