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The International Society for Microbial Ecology (ISME) is the principal scientific society for the burgeoning field of microbial ecology and its related disciplines. ISME is a non-profit association and is owner of the International Symposia on Microbial Ecology and also owner of The ISME Journal which is published by Springer Nature (impact factor 2016 9.6 - Reuters Thomson). The ISME Office is based at the Netherlands Institute of Ecology (NIOO-KNAW) in Wageningen, The Netherlands.
ISME fosters the exchange of scientific information by organizing international symposia as well as specific workshops, sponsoring publications, and promoting education and research. ISME provides services to the scientific as well as the wider community. The society enjoys close collaborations with other key scientific organizations, and has established effective scientific interactions in all geographical regions through a network of scientific leaders who serve as ISME National Ambassadors. Anyone with an interest in Microbial Ecology can become a member of ISME.
The important role of microorganisms in natural environments was recognized by leading microbiologists in the late nineteenth century, in particular M. Beijerinck and S. Winogradsky. In his insightful lecture on the role of microbes in general circulation of life (1897) 1), Winogradsky stressed the cardinal role of microorganisms in the circulation of elements on the earth. Discussing the diversity of microorganisms in an environment and microbe-microbe interactions among the populations, he pointed out the specialized functions of various microorganisms in the processes of matter circulation, and the succession of different functional groups in the community in which they work. However, at the era of Winogradsky and Beiuerinck, the only means of discriminating and identifying microorganisms in-situ was the microscopic observation, and the quantitative analysis of the role played by each microorganism in the community was, in most cases, not attained.
In the 20th century, particularly after the Second World War, we have seen extensive developments in the method of isolation, counting and differentiation of microorganisms in environments. The new methodology in taxonomy, like the numerical taxonomy and chemotaxonomy, was soon applied for the identification of environmental isolates. Also, differential staining methods and fluorescent antibody techniques were introduced for in-situ observation of microorganisms. Various new techniques, ranging from the determination of growth and activity of microorganisms in the environments to their isolation and characterization, were assembled in “Modern Methods in the Study of Microbial Ecology” edited by Thomas Rosswall in 1973). The book was based on the meeting held at the Swedish University of Agricultural Sciences, Uppsala, in 1972, and the symposium, preceded the formal ISME, is now known as ISME-0 since R. Guerrero presented at the ISME-63).
The new methods and techniques were proved to be successful for the analysis of microbial community in various fields, soil and water microbiology, food preservation and fermentation, and medical microbiology. The microbiologists working in different fields quickly became aware of the unified concept, microbial ecology. The work of T. Brock "Principles of Microbial Ecology" in 1964) gave a profound impact to the further development of microbial ecology in various countries.
On these ground of rapid expansion of microbial ecology, IAMS, International Association of Microbiological Societies, (modified its name to IUMS after 1980) decided to establish ICOME, International Commission of Microbial Ecology, at the 10th International Congress of Microbiology in Mexico City 1970. The ICOME started the next year.
A role stressed for the establishment of ICOME was its active participation in the environmental problems, water and soil pollution and deterioration of environments by human activities. However, the years after Mexico showed that the interest of the Committee was not restricted to the environmental problems, but extended to the central themes of microbial ecology, i.e. cycling of elements in soil and sediments, interactions between microorganisms and plants, animals, and among themselves, the effect of environmental factors on the growth and activities of microorganisms. Moreover, the important role of microorganisms has been recognized by scientists working in many applied fields, formation and fertility of soil, water supplies, fermentation of food and beverages, food preservation, digestive tract and rumen, and even the decay of ancient remains.
The quick and extensive development of the microbial ecology, led to the first International Symposium on Microbial Ecology. The number of participants increased from 380 from 30 countries at the first meeting in Dunedin to 2,000 from 65 countries at ISME-11, Vienna. We could say that the microbial ecology established a definite niche at the scientific world. The scope of topics also broadened. Along with the central, theoretical topics, topics in the applied fields as bioremediation, medical microbiology, food, soil, and water microbiology, entered into the symposium topics. Gastrointestinal microecology first appeared at a symposium session of ISME-3, East Lansing, the topics on fermentation technology and intestinal flora at ISME-4, Ljubljana, and medical microbiology at ISME-5, Kyoto. These topics continued to be favored topics in the subsequent symposia.
ICOME had long functioned on an informal basis, and the principal activity was to hold triennial international symposium. However, the progress and development of microbial ecology was so quick and overwhelming that we had to further intensify the role of ICOME that had been an international commission affiliated to IUMS and IUBS, and establish an independent international organization based on the microbial ecology.
There were many obstacles in transferring from a Committee to a Society. However, Prof. J. Tiedje, who acted as the Chairperson of ICOME since 1995, took the active initiative for creating the new Society and consulted with various international organizations and with editors and publishers of journals. He suggested to change the status of ICOME to an International Society of Microbial Ecology (ISME) which has its own journal. He asked the ICOME executive committee to consider and discuss his proposal, and put forward the further steps needed for the establishment of the Society. According to his scheme, the Executive Committee set the framework of the Society and the journal including the scope, editorial board and journal policy.
The proposal for the establishment of the Society was presented and endorsed at ISME-8 in Halifax, Canada, 1998. The foundation of ISME is obviously an important step for future development of microbial ecology, and we owe Prof. Tiedje for his tireless effort and patience during the long process of establishing the Society. The Association founded and registered in East Lancing, MI, USA, and later relocated and established in its registered office is in Geneva.
Meanwhile, Prof. Tiedje consulted with Springer, the publisher of journal “Microbial Ecology”. As a result of the negotiation, Microbial Ecology became affiliated with newly established International Association for Microbial Ecology, the publisher appointing the Editor and Editorial Board of the journal, in consultation with the ISME.
The number of the participants in ISME symposia continued to increase. At the ISME-10 in Cancun, 2004, we had 2000 participants. Microbiologists working in various fields became aware of ecological concepts, and novel methods have evolved very rapidly. Considering the increase in the participants, very fast development of microbial ecology and quickly emerging contemporary problems, the Society determined to hold the symposia in every two years after ISME-10.
Today, the ISME symposia, organized every two years, are the largest international meetings addressing the wide range of topics in Microbial Ecology.
Year | Conference | Location | Title |
---|---|---|---|
2018 | ISME-17 | Leipzig, Germany | Innovations in Microbial Ecology |
2016 | ISME-16 | Montreal, South Canada | Microbial Ecology |
2014 | ISME-15 | Seoul, South Korea | Microbes |
2012 | ISME-14 | Copenhagen, Denmark | The Power of the Small |
2010 | ISME-13 | Seattle, USA | Microbes -Stewards of a Changing Planet |
2008 | ISME-12 | Cairns, Australia | Sustaining the blue planet |
2006 | ISME-11 | Vienna, Austria | The hidden powers-microbial communities in action |
2004 | ISME-10 | Cancun, Mexico | Microbial planet: sub-surface to space |
2001 | ISME-09 | Amsterdam, Netherlands | Interactions in the microbial world |
1998 | ISME-08 | Halifax, Canada | Microbial biosystems: new frontiers |
1995 | ISME-07 | São Paulo, Brazil | Progress in microbial ecology |
1992 | ISME-06 | Barcelona, Spain | Trends in microbial ecology |
1989 | ISME-05 | Kyoto, Japan | Recent advances in microbial ecology |
1986 | ISME-04 | Ljubljana, Slovenia | Perspectives in microbial ecology |
1983 | ISME-03 | East Lansing, USA | Current Perspectives in microbial Ecology |
1980 | ISME-02 | Warwick, UK | Contemporary Microbial Ecology |
1977 | ISME-01 | Dunedin, New Zealand | Microbial Ecology |
In May 2007 the International Society for Microbial Ecology (ISME) and Nature Publishing Group (NPG) launched a brand new publication: The ISME Journal . Prof. Cohen, who was the President of ISME since 2000, with his successors Prof. S. Kjelleberg and Prof. Hilary Lappin-Scott, made a great effort in founding the journal. The Journal is fully indexed by Medline and all content is now hosted on PubMed.
The current (2015) impact factor of the journal is 9.3 and the full title of the journal, The ISME Journal: Multidisciplinary Journal of Microbial Ecology, reflects the integrated nature of modern microbial ecology, and the goals and scope of the journal manifest this.
Topics of particular interest within the journal’s scope include those listed below:
A microorganism, or microbe, is an organism of microscopic size, which may exist in its single-celled form or as a colony of cells.
The American Society for Microbiology (ASM), originally the Society of American Bacteriologists, is a professional organization for scientists who study viruses, bacteria, fungi, algae, and protozoa as well as other aspects of microbiology. It was founded in 1899. The Society publishes a variety of scientific journals, textbooks, and other educational materials related to microbiology and infectious diseases. ASM organizes annual meetings, as well as workshops and professional development opportunities for its members.
Microbial ecology is the ecology of microorganisms: their relationship with one another and with their environment. It concerns the three major domains of life—Eukaryota, Archaea, and Bacteria—as well as viruses.
Sergei Nikolaevich Winogradsky (Russian: Сергей Николаевич Виноградский; Ukrainian: Сергій Миколайович Виноградський; 13 September [O.S. 1 September] 1856, Kyiv – 24 February 1953, Brie-Comte-Robert), also published under the name Sergius Winogradsky, was a Ukrainian and Russian microbiologist, ecologist and soil scientist who pioneered the cycle-of-life concept. Winogradsky discovered the first known form of lithotrophy during his research with Beggiatoa in 1887. He reported that Beggiatoa oxidized hydrogen sulfide (H2S) as an energy source and formed intracellular sulfur droplets. This research provided the first example of lithotrophy, but not autotrophy. Born in the capital of present-day Ukraine, his legacy is also celebrated by this nation.
Effective microorganisms (EM) are various blends of common predominantly anaerobic microorganisms in a carbohydrate-rich liquid carrier substrate of EM Research Organization, Inc.
A copiotroph is an organism found in environments rich in nutrients, particularly carbon. They are the opposite to oligotrophs, which survive in much lower carbon concentrations.
Microbiology is the scientific study of microorganisms, those being of unicellular (single-celled), multicellular, or acellular. Microbiology encompasses numerous sub-disciplines including virology, bacteriology, protistology, mycology, immunology, and parasitology.
Arnold L. Demain was an American microbiologist. During his 60-year career, he gained a reputation in the field of industrial microbiology. He was the Professor of Industrial Microbiology in the Biology Department at MIT and Founder and Head of Department of Fermentation Microbiology at Merck & Co. The August 2010 edition of The Journal of Antibiotics celebrated his scientific career. Demain was described as "one of the world's leading industrial microbiologists" and as "a scientist constantly in the forefront of industrial microbiology and biotechnology." He was "a pioneer in research on the elucidation and regulation of the biosynthetic pathways leading to the penicillins and cephalosporins" and "instrumental in the development of the beta-lactam industry". One feature of Demain's work, according to Microbiology Australia, was his "ability to undertake fundamental research on systems with clear industrial applications, recognising that biodiscovery is the start of the road that includes strain improvement to achieve levels of product synthesis that warrant further investment to take products into the marketplace."
Edward Francis DeLong, is a marine microbiologist and professor in the Department of Oceanography at the University of Hawaii, Manoa, and is considered a pioneer in the field of metagenomics. He is best known for his discovery of the bacterial use of the rhodopsin protein in converting sunlight to biochemical energy in marine microbial communities.
Robert Edward Hungate was a pioneering American microbial ecologist who developed the first techniques for the culturing of anaerobic microbes in his study of the bovine rumen.
A microbiome is the community of microorganisms that can usually be found living together in any given habitat. It was defined more precisely in 1988 by Whipps et al. as "a characteristic microbial community occupying a reasonably well-defined habitat which has distinct physio-chemical properties. The term thus not only refers to the microorganisms involved but also encompasses their theatre of activity". In 2020, an international panel of experts published the outcome of their discussions on the definition of the microbiome. They proposed a definition of the microbiome based on a revival of the "compact, clear, and comprehensive description of the term" as originally provided by Whipps et al., but supplemented with two explanatory paragraphs. The first explanatory paragraph pronounces the dynamic character of the microbiome, and the second explanatory paragraph clearly separates the term microbiota from the term microbiome.
Rudolf Amann is a German biochemistriest and microbiologist. He is director of Max Planck Institute for Marine Microbiology (MPIMM) in Bremen and Professor for Microbial Ecology at the University of Bremen.
Alison Murray is an American microbial ecologist and Antarctic researcher, best known for studying the diversity, ecology and biogeography of Antarctic marine plankton dynamics of the plankton over the annual cycle; and her work demonstrating the existence of microbial life within an ice-sealed Antarctic lake. She studies how microorganisms persist and function in extremely cold and harsh environments, including those that lack oxygen and biological sources of energy.
The branches of microbiology can be classified into pure and applied sciences. Microbiology can be also classified based on taxonomy, in the cases of bacteriology, mycology, protozoology, and phycology. There is considerable overlap between the specific branches of microbiology with each other and with other disciplines, and certain aspects of these branches can extend beyond the traditional scope of microbiology In general the field of microbiology can be divided in the more fundamental branch and the applied microbiology (biotechnology). In the more fundamental field the organisms are studied as the subject itself on a deeper (theoretical) level. Applied microbiology refers to the fields where the micro-organisms are applied in certain processes such as brewing or fermentation. The organisms itself are often not studied as such, but applied to sustain certain processes.
Dr. Thomas L. Kieft is an environmental microbiologist who investigates the ecology and biogeochemistry of microbes in extreme environments. He is a professor of Biology at New Mexico Institute of Mining and Technology.
Kornelia Smalla is a chemist and biotechnologist at the Julius Kuehn Institute (JKI) in Braunschweig and a university lecturer in microbiology at the Technical University of Braunschweig.
Kristen M. DeAngelis is a professor in the department of Microbiology at the University of Massachusetts where she studies soil microbes in relation to climate change.
Vasily Leonidovich Omelianski was a Russian microbiologist and author of the first original Russian text book on microbiology. He was the only student of Sergei Winogradsky and succeeded him as head of the department of General Microbiology at the Institute of Experimental Medicine in Saint Petersburg.
Stephen Joseph Giovannoni is an American microbiologist whose research mainly focuses on marine microbes. He is a fellow of the American Academy of Microbiology and a founding co-editor of the Annual Review of Marine Science.
Jamie S. Foster is an American astrobiologist, microbiologist, and academic. She is a professor at the Department of Microbiology and Cell Science, and Genetics and Genomes Graduate Program at the University of Florida.