Klosneuvirus | |
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Virus classification | |
(unranked): | Virus |
Realm: | Varidnaviria |
Kingdom: | Bamfordvirae |
Phylum: | Nucleocytoviricota |
Class: | Megaviricetes |
Order: | Imitervirales |
Family: | Mimiviridae |
Subfamily: | Klosneuvirinae |
Genus: | Klosneuvirus |
Klosneuvirus (KNV, also KloV) is a new type of giant virus found by the analysis of low-complexity metagenomes from a wastewater treatment plant in Klosterneuburg, Austria. It has a 1.57-Mb genome coding unusually high number of genes typically found in cellular organisms, including aminoacyl transfer RNA synthetases with specificities for 19 different amino acids, over 10 translation factors and several tRNA-modifying enzymes. [1] Klosneuvirus, Indivirus , Catovirus and Hokovirus , are part of a group of giant viruses denoted as Klosneuviruses or Klosneuvirinae , a proposed subfamily of the Mimiviridae .
Species in this clade include Bodo saltans virus infecting the kinetoplastid Bodo saltans . [2]
Phylogenetic tree topology of Mimiviridae is still under discussion. As Klosneuviruses are related to Mimivirus , it was proposed to put them all together into a subfamily Megavirinae. [2] Other authors (CNS 2018) like to put Klosneuviruses just together with Cafeteria roenbergensis virus (CroV) and Bodo saltans virus (BsV) into a tentative subfamily called Aquavirinae. [3]
Sedoreoviridae is a family of double-stranded RNA viruses. Member viruses have a wide host range, including vertebrates, invertebrates, plants, protists and fungi. They lack lipid envelopes and package their segmented genome within multi-layered capsids. Lack of a lipid envelope has allowed three-dimensional structures of these large complex viruses to be obtained, revealing a structural and likely evolutionary relationship to the cystovirus family of bacteriophage. There are currently 97 species in this family, divided among 15 genera in two subfamilies. Reoviruses can affect the gastrointestinal system and respiratory tract. The name "reo-" is an acronym for "respiratory enteric orphan" viruses. The term "orphan virus" refers to the fact that some of these viruses have been observed not associated with any known disease. Even though viruses in the family Reoviridae have more recently been identified with various diseases, the original name is still used.
Mimivirus is a genus of giant viruses, in the family Mimiviridae. Amoeba serve as their natural hosts. This genus contains a single identified species named Acanthamoeba polyphaga mimivirus (APMV). It also refers to a group of phylogenetically related large viruses.
Tick-borne encephalitis virus (TBEV) is a positive-strand RNA virus associated with tick-borne encephalitis in the genus Flavivirus.
Bodo is a genus of microscopic kinetoplastids, flagellate excavates first described in 1831 by Christian Gottfried Ehrenberg. The genus is small, as it has recently been redefined to include only four species. Bodo includes free-living, phagotrophic organisms that can be found in many marine and freshwater environments as well as some terrestrial environments. Being phagotrophic, Bodo feeds on bacteria and other microorganisms that it finds while swimming through its water-based habitats. The swimming-like movement is facilitated by the two unequal flagella that Bodo possesses which arise from an anteriorly located flagellar pocket. Bodo is roughly bean-shaped and is often missed in samples from water or terrestrial environments due to its small size.
Bodo saltans is a free-living nonparasitic species of kinetoplastid flagellated phagotrophic protozoa that feed on bacteria. Bodo saltans cells have been reported in freshwater and marine environments.
A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Viruses are found in almost every ecosystem on Earth and are the most numerous type of biological entity. Since Dmitri Ivanovsky's 1892 article describing a non-bacterial pathogen infecting tobacco plants and the discovery of the tobacco mosaic virus by Martinus Beijerinck in 1898, more than 11,000 of the millions of virus species have been described in detail. The study of viruses is known as virology, a subspeciality of microbiology.
Mimiviridae is a family of viruses. Amoeba and other protists serve as natural hosts. The family is divided in up to 4 subfamilies. Viruses in this family belong to the nucleocytoplasmic large DNA virus clade (NCLDV), also referred to as giant viruses.
Mamavirus is a large and complex virus in the Group I family Mimiviridae. The virus is exceptionally large, and larger than many bacteria. Mamavirus and other mimiviridae belong to nucleocytoplasmic large DNA virus (NCLDVs) family. Mamavirus can be compared to the similar complex virus mimivirus; mamavirus was so named because it is similar to but larger than mimivirus.
Cafeteria roenbergensis virus (CroV) is a giant virus that infects the marine bicosoecid flagellate Cafeteria roenbergensis, a member of the microzooplankton community.
Organic Lake is a lake in the Vestfold Hills in eastern Antarctica. It was formed 6,000 years ago when sea levels were higher; it is isolated, rather shallow 7.5 metres (25 ft), meromictic, a few hundred meters in diameter and has extremely salty water. It has the highest recorded concentration of dimethyl sulfide in any natural body of water.
A giant virus, sometimes referred to as a girus, is a very large virus, some of which are larger than typical bacteria. All known giant viruses belong to the phylum Nucleocytoviricota.
Tupanvirus is a genus of viruses first described in 2018. The genus is composed of two species of virus that are in the giant virus group. Researchers discovered the first isolate in 2012 from deep water sediment samples taken at 3000m depth off the coast of Brazil. The second isolate was collected from a soda lake in Southern Nhecolândia, Brazil in 2014. They are named after Tupã (Tupan), a Guaraní thunder god, and the places they were found. These are the first viruses reported to possess genes for amino-acyl tRNA synthetases for all 20 standard amino acids.
Chrysochromulina ericina virus 01B, or simply Chrysochromulina ericina virus (CeV) is a giant virus in the family Mimiviridae infecting Haptolina ericina, a marine microalgae member of the Haptophyta. CeV is a dsDNA virus.
Hokovirus (HokV) is a genus of giant double-stranded DNA-containing viruses (NCLDV). This genus was detected during the analysis of metagenome samples of bottom sediments of reservoirs at the wastewater treatment plant in Klosterneuburg, Austria. New Klosneuvirus (KNV), Catovirus and Indivirus genera were also described together with Hokovirus, building up a putative virus subfamily Klosneuvirinae (Klosneuviruses) with KNV as type genus. Hokovirus has a large genome of 1.33 million base pairs. This is the third largest genome among known Klosneuviruses after KNV and Catovirus. GC content is 21.4 % Classification of metagenome, made by analyzing 18S rRNA indicate that their hosts are relate to the simple Cercozoa.
Catovirus (CatV) is a genus of giant double-stranded DNA-containing viruses. This genus was detected during the analysis of metagenome samples of bottom sediments of reservoirs at the wastewater treatment plant in Klosterneuburg, Austria. New Klosneuvirus (KNV), Hokovirus and Indivirus genera were also described together with Catovirus, building up a putative virus subfamily Klosneuvirinae (Klosneuviruses) with KNV as type genus. Catovirus has a large genome of 1.53 million base pairs. This is the second largest genome among known Klosneuviruses after KNV. GC content is 26.4 % Classification of metagenome, made by analyzing 18S rRNA indicate that their hosts are relate to the simple Cercozoa.
Indivirus (IndV) is a genus of giant double-stranded DNA-containing viruses (NCLDV). This genus was detected during the analysis of metagenome samples of bottom sediments of reservoirs at the wastewater treatment plant in Klosterneuburg, Austria. New Klosneuvirus (KNV), Hokovirus and Catovirus genera were also described together with Indivirus, building up a putative virus subfamily Klosneuvirinae (Klosneuviruses) with KNV as type genus. Indivirus has a genome of 0.86 million base pairs. This is the smallest genome among Klosneuviruses as mentioned above. GC content is 26.6 % Classification of metagenome, made by analyzing 18S rRNA indicate that their hosts are relate to the simple Cercozoa.
Marine viruses are defined by their habitat as viruses that are found in marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. Viruses are small infectious agents that can only replicate inside the living cells of a host organism, because they need the replication machinery of the host to do so. They can infect all types of life forms, from animals and plants to microorganisms, including bacteria and archaea.
Nucleocytoviricota is a phylum of viruses. Members of the phylum are also known as the nucleocytoplasmic large DNA viruses (NCLDV), which serves as the basis of the name of the phylum with the suffix -viricota for virus phylum. These viruses are referred to as nucleocytoplasmic because they are often able to replicate in both the host's cell nucleus and cytoplasm.
Orthornavirae is a kingdom of viruses that have genomes made of ribonucleic acid (RNA), including genes which encode an RNA-dependent RNA polymerase (RdRp). The RdRp is used to transcribe the viral RNA genome into messenger RNA (mRNA) and to replicate the genome. Viruses in this kingdom share a number of characteristics which promote rapid evolution, including high rates of genetic mutation, recombination, and reassortment.
The Bodo saltans virus is a giant virus of the Mimiviridae family that infects the protozoa Bodo saltans. It has a genome of 1.39 megabases, one of the largest known viral genomes.