Rhizoliths are organosedimentary structures formed in soils or fossil soils (paleosols) by plant roots. They include root moulds, casts, and tubules, root petrifactions, and rhizocretions. Rhizoliths, and other distinctive modifications of carbonate soil texture by plant roots, are important for identifying paleosols in the post-Silurian geologic record. Rock units whose structure and fabric were established largely by the activity of plant roots are called rhizolites. [1]
Colin F. Klappa first proposed the term rhizolith for various organosedimentary structures produced by the activity of plant roots in 1980, [1] and his terminology has since been widely adopted [2] with some extensions. [3]
Root moulds are tubular voids that preserve the shape of a root that has subsequently decayed away. Such voids will collapse unless the root penetrated soil that was already at least partially lithified. Closely packed, very thin root moulds give the sediments an alveolar texture. [4]
Sediments or minerals that fill a root mould and become cemented produce a root cast. [5]
Root tubules are cemented cylinders around a root mould. The cement is typically calcite and is responsible for the preservation of root morphology in otherwise poorly consolidated sediments. Root tubules can form while the root is still alive or during its decay, and often take the form of fine, needle-like calcite crystals that preserve the root tubule after the root has completely decayed. [6]
Root petrifactions are similar to petrified wood and are formed when minerals encrust, impregnate, or replace the organic matter of a plant root, sometimes preserving it in great detail. The replacement mineral is typically calcite. Cell walls are most commonly preserved, perhaps because calcium pectate is already present in the walls. [7]
Rhizocretion is distinguished from petrifaction by the manner of formation. Petrifaction is defined as 'a process of fossilization whereby organic matter is converted into a stony substance by the infiltration of water containing dissolved inorganic matter, such as calcium carbonate and silica, which replaces the original organic material, sometimes retaining the original structure'. [7] Thus root petrifaction is a process which involves replacement, impregnation, encrustation and void-filling of organic matter by mineral matter without total loss of root anatomical features. By contrast, rhizocretions which include rhizoliths, are created by the accumulation of mineral matter around roots. Accumulation, usually accompanied by cementation, may occur during life or death of plant roots. [8]
Rhizohaloes are zones of chemical reduction around decomposed plant roots. These typically appear as elongated gray mottles with reddish rims. They form when iron and manganese are reduced close to the root and the soluble reduced metals diffuse outwards. The metals are then oxidized again and deposited as hematite or goethite. [3]
Rhizoliths, like animal burrows, are commonly circular in cross-section and cylindrical in shape, and so the two can be confused. Rhizoliths vary in length from a few centimeters to several meters, while burrows are generally less than a meter long. However, animal burrows up to 9 metres (30 ft) have been found. The diameters of rhizoliths range from 0.1–20 millimetres (0.0039–0.7874 in), while the longest reported animal burrow had a width of 0.5 centimetres (0.20 in). [9]
Rhizoliths can also be distinguished from animal burrows by their branching pattern and orientation. Roots become narrower as they branch, as do the rhizoliths they produce. Branching animal burrows are usually uniform in diameter out to the furthest branches. Roots branch horizontally or vertically, while animal burrows are characteristically horizontal, inclined, or vertical. Rhizolithis are characteristic of terrestrial sediments while animal burrows are more often found in marine beds. [9]
Rhizoliths can also be confused with stem moulds formed in playas. However, stem moulds can be distinguished their lack of root-like branching and by chemical or microscopic features. [10]
Plant roots normally remove calcium from soil while lowering its pH, by exchanging H+ ions for Ca2+, Mg2+, K+, and other cations. [11] This contributes to the ability of roots to bore through rock, but it works against precipitation of calcite around roots. Several explanations have been offered for how rhizoliths are nonetheless able to form. [12]
One possibility is that some plant roots take up more anions than cations, maintaining charge balance by secreting HCO3− ions rather than H+ ions. In so doing, the pH of the surrounding soil is raised, rather than lowered. This may trigger precipitation of calcium carbonate around roots, this leading to the formation of rhizocretions. [13] The greater uptake of water than calcium by roots also increases the saturation of calcium carbonate. [14]
Other possibilities include the excretion of organic acids by plant roots; the presence of symbiotic bacteria, fungi, or algae that precipitate calcium carbonate; or exclusion of calcium from roots. The first seems most likely. [15] [16] [17]
Rhizoliths are important for identifying paleosols in the geologic record. However, they are limited to post-Silurian beds, since vascular plants with extensive root systems did not flourish until this time. [18]
Both hematite-rimmed rhizohaloes and calcareous rhizoliths are found in moderately well-drained red paleosols. More poorly drained purple paleosols contain rhizohaloes rimmed with goethite, while the most poorly drained paleosols root tubules composed of tiny black iron-manganese spheres, sometimes in association with jarosite. Conditions of water saturation in paleosols can thus be inferred from the mineralogy of rhizoliths. [3]
Unusual rhizoliths from the Lower Cretaceous have provided evidence of the earliest activity of social termites. [19]
Limestone is a type of carbonate sedimentary rock which is the main source of the material lime. It is composed mostly of the minerals calcite and aragonite, which are different crystal forms of CaCO3. Limestone forms when these minerals precipitate out of water containing dissolved calcium. This can take place through both biological and nonbiological processes, though biological processes, such as the accumulation of corals and shells in the sea, have likely been more important for the last 540 million years. Limestone often contains fossils which provide scientists with information on ancient environments and on the evolution of life.
Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support the life of plants and soil organisms. Some scientific definitions distinguish dirt from soil by restricting the former term specifically to displaced soil.
Sedimentary rocks are types of rock that are formed by the accumulation or deposition of mineral or organic particles at Earth's surface, followed by cementation. Sedimentation is the collective name for processes that cause these particles to settle in place. The particles that form a sedimentary rock are called sediment, and may be composed of geological detritus (minerals) or biological detritus. The geological detritus originated from weathering and erosion of existing rocks, or from the solidification of molten lava blobs erupted by volcanoes. The geological detritus is transported to the place of deposition by water, wind, ice or mass movement, which are called agents of denudation. Biological detritus was formed by bodies and parts of dead aquatic organisms, as well as their fecal mass, suspended in water and slowly piling up on the floor of water bodies. Sedimentation may also occur as dissolved minerals precipitate from water solution.
Chalk is a soft, white, porous, sedimentary carbonate rock. It is a form of limestone composed of the mineral calcite and originally formed deep under the sea by the compression of microscopic plankton that had settled to the sea floor. Chalk is common throughout Western Europe, where deposits underlie parts of France, and steep cliffs are often seen where they meet the sea in places such as the Dover cliffs on the Kent coast of the English Channel.
Weathering is the deterioration of rocks, soils and minerals through contact with water, atmospheric gases, sunlight, and biological organisms. Weathering occurs in situ, and so is distinct from erosion, which involves the transport of rocks and minerals by agents such as water, ice, snow, wind, waves and gravity.
Soil formation, also known as pedogenesis, is the process of soil genesis as regulated by the effects of place, environment, and history. Biogeochemical processes act to both create and destroy order (anisotropy) within soils. These alterations lead to the development of layers, termed soil horizons, distinguished by differences in color, structure, texture, and chemistry. These features occur in patterns of soil type distribution, forming in response to differences in soil forming factors.
A concretion is a hard, compact mass formed by the precipitation of mineral cement within the spaces between particles, and is found in sedimentary rock or soil. Concretions are often ovoid or spherical in shape, although irregular shapes also occur. The word 'concretion' is derived from the Latin concretio "(act of) compacting, condensing, congealing, uniting", itself from con meaning 'together' and crescere meaning "to grow". Concretions form within layers of sedimentary strata that have already been deposited. They usually form early in the burial history of the sediment, before the rest of the sediment is hardened into rock. This concretionary cement often makes the concretion harder and more resistant to weathering than the host stratum.
Dolomite (also known as dolomite rock, dolostone or dolomitic rock) is a sedimentary carbonate rock that contains a high percentage of the mineral dolomite, CaMg(CO3)2. It occurs widely, often in association with limestone and evaporites, though it is less abundant than limestone and rare in Cenozoic rock beds (beds less than about 66 million years in age). The first geologist to distinguish dolomite from limestone was Déodat Gratet de Dolomieu; a French mineralogist and geologist whom it is named after. He recognized and described the distinct characteristics of dolomite in the late 18th century, differentiating it from limestone.
The pedosphere is the outermost layer of the Earth that is composed of soil and subject to soil formation processes. It exists at the interface of the lithosphere, atmosphere, hydrosphere and biosphere. The pedosphere is the skin of the Earth and only develops when there is a dynamic interaction between the atmosphere, biosphere, lithosphere and the hydrosphere. The pedosphere is the foundation of terrestrial life on Earth.
A ganister is hard, fine-grained quartzose sandstone, or orthoquartzite, used in the manufacture of silica brick typically used to line furnaces. Ganisters are cemented with secondary silica and typically have a characteristic splintery fracture.
Bioturbation is defined as the reworking of soils and sediments by animals or plants. It includes burrowing, ingestion, and defecation of sediment grains. Bioturbating activities have a profound effect on the environment and are thought to be a primary driver of biodiversity. The formal study of bioturbation began in the 1800s by Charles Darwin experimenting in his garden. The disruption of aquatic sediments and terrestrial soils through bioturbating activities provides significant ecosystem services. These include the alteration of nutrients in aquatic sediment and overlying water, shelter to other species in the form of burrows in terrestrial and water ecosystems, and soil production on land.
In the geosciences, paleosol is an ancient soil that formed in the past. The precise definition of the term in geology and paleontology is slightly different from its use in soil science.
Caliche is a sedimentary rock, a hardened natural cement of calcium carbonate that binds other materials—such as gravel, sand, clay, and silt. It occurs worldwide, in aridisol and mollisol soil orders—generally in arid or semiarid regions, including in central and western Australia, in the Kalahari Desert, in the High Plains of the western United States, in the Sonoran Desert, Chihuahuan Desert and Mojave Desert of North America, and in eastern Saudi Arabia at Al-Hasa. Caliche is also known as calcrete or kankar. It belongs to the duricrusts. The term caliche is borrowed from Spanish and is originally from the Latin word calx, meaning lime.
Carbonate rocks are a class of sedimentary rocks composed primarily of carbonate minerals. The two major types are limestone, which is composed of calcite or aragonite (different crystal forms of CaCO3), and dolomite rock (also known as dolostone), which is composed of mineral dolomite (CaMg(CO3)2). They are usually classified based on texture and grain size. Importantly, carbonate rocks can exist as metamorphic and igneous rocks, too. When recrystallized carbonate rocks are metamorphosed, marble is created. Rare igneous carbonate rocks even exist as intrusive carbonatites and, even rarer, there exists volcanic carbonate lava.
Paleopedology is the discipline that studies soils of past geological eras, from quite recent (Quaternary) to the earliest periods of the Earth's history. Paleopedology can be seen either as a branch of soil science (pedology) or of paleontology, since the methods it uses are in many ways a well-defined combination of the two disciplines.
Calcareous is an adjective meaning "mostly or partly composed of calcium carbonate", in other words, containing lime or being chalky. The term is used in a wide variety of scientific disciplines.
The phosphorus cycle is the biogeochemical cycle that describes the movement of phosphorus through the lithosphere, hydrosphere, and biosphere. Unlike many other biogeochemical cycles, the atmosphere does not play a significant role in the movement of phosphorus, because phosphorus and phosphorus-based compounds are usually solids at the typical ranges of temperature and pressure found on Earth. The production of phosphine gas occurs in only specialized, local conditions. Therefore, the phosphorus cycle should be viewed from whole Earth system and then specifically focused on the cycle in terrestrial and aquatic systems.
Shallow water marine environment refers to the area between the shore and deeper water, such as a reef wall or a shelf break. This environment is characterized by oceanic, geological and biological conditions, as described below. The water in this environment is shallow and clear, allowing the formation of different sedimentary structures, carbonate rocks, coral reefs, and allowing certain organisms to survive and become fossils.
The calcium cycle is a transfer of calcium between dissolved and solid phases. There is a continuous supply of calcium ions into waterways from rocks, organisms, and soils. Calcium ions are consumed and removed from aqueous environments as they react to form insoluble structures such as calcium carbonate and calcium silicate, which can deposit to form sediments or the exoskeletons of organisms. Calcium ions can also be utilized biologically, as calcium is essential to biological functions such as the production of bones and teeth or cellular function. The calcium cycle is a common thread between terrestrial, marine, geological, and biological processes. Calcium moves through these different media as it cycles throughout the Earth. The marine calcium cycle is affected by changing atmospheric carbon dioxide due to ocean acidification.