In cellular biology, traction force microscopy (TFM) is an experimental method for determining the tractions on the surface of a cell by obtaining measurements of the surrounding displacement field within an in vitro extracellular matrix (ECM).
The dynamic mechanical behavior of cell-ECM and cell-cell interactions is known to influence a vast range of cellular functions, including necrosis, differentiation, adhesion, migration, locomotion, and growth. TFM utilizes experimentally observed ECM displacements to calculate the traction, or stress vector, at the surface of a cell. Before TFM, efforts observed cellular tractions on silicone rubber substrata wrinkling around cells; [1] however, accurate quantification of the tractions in such a technique is difficult due to the nonlinear and unpredictable behavior of the wrinkling. Several years later, the terminology TFM was introduced to describe a more advanced computational procedure that was created to convert measurements of substrate deformation into estimated traction stresses. [2]
In conventional TFM, cellular cultures are seeded on, or within, an optically transparent 3D ECM embedded with fluorescent microspheres (typically latex beads with diameters ranging from 0.2-1 μm). [3] [4] [5] [6] [7] A wide range of natural and synthetic hydrogels can be used for this purpose, with the prerequisite that mechanical behavior of the material is well characterized, and the hydrogel is capable of maintaining cellular viability. The cells will exert their own forces into this substrate which will consequently displace the beads in the surrounding ECM. In some studies, a detergent, enzyme, or drug is used to disturb the cytoskeleton, thereby altering, or sometimes completely eliminating, the tractions generated by the cell.
First, a continuous displacement field is computed from a pair of images: the first image being the reference configuration of microspheres surrounding an isolated cell, and the second image being the same isolated cell surrounded by microspheres that are now displaced due to the cellular-generated tractions. Confocal fluorescence microscopy is usually employed to image the cell surface and fluorescent beads. After computing the translational displacement field between a deformed and undeformed configuration, a strain field can be calculated by often using a regularization approach, the best of which is the elastic net regularization. [8] From the strain field, the stress field surrounding the cell can be calculated with knowledge of the stress-strain behavior, or constitutive model, of the surrounding hydrogel material. It is possible to proceed one step further, and use the stress field to compute the tractions at the surface of the cell, if the normal vectors to the cell surface can be obtained from a 3D image stack. Although this procedure is a common way to obtain the cellular tractions from microsphere displacement, some studies have successfully utilized an inverse computational algorithm to yield the traction field. [9] [10] [11]
The spatial resolution of the traction field that can be recovered with TFM is limited by the number of displacement measurements per area. [12] The spacing of independent displacement measurements varies with experimental setups, but is usually on the order of one micrometer. The traction patterns produced by cells frequently contain local maxima and minima that are smaller. Detection of these fine variations in local cellular traction with TFM remains challenging.
In 2D TFM, cells are cultured as a monolayer on the surface of a thin substrate with a tunable stiffness, and the microspheres near the surface of the substrate undergo deformation through cell-ECM connections. 2.5D cell cultures are similarly grown on top of a thin layer of ECM, and diluted structural ECM proteins are mixed to the medium added above the cells and substrate. Although most of the seminal work in TFM was performed in 2D, or 2.5D, many cell types require the complex biophysical and biochemical cues from a 3D ECM to behave in a truly physiologically realistic manner within an in vitro environment. [13]
When the rotation or stretch of a sub volume is large, errors can be introduced into the calculation of cell surface tractions since most TFM techniques employ a computational framework based on linear elasticity. Recent advances in TFM have shown that cells are capable of exerting deformations with strain magnitudes up to 40%, which requires usage of a finite deformation theory approach to account for large strain magnitudes. [14]
Although TFM is frequently used to observe tractions at the surface of a spatially isolated individual cell, a variation of TFM can also be used to analyze the collective behavior of multicellular systems. For example, cellular migration velocities and plithotaxis are observed alongside a computed stress variation map of a monolayer sheet of cells, in an approach termed monolayer stress microscopy. [15] The mechanical behavior of single cells versus a confluent layer of cells differ in that the monolayer experiences a "tug-of-war" state. There is also evidence of a redistribution of tractions that can take place earlier than changes in cell polarity and migration. [16]
TFM has proven particularly useful to study durotaxis as well.
TFM has recently been applied to explore the mechanics of cancer cell invasion with the hypothesis that cells which generate large tractions are more invasive than cells with lower tractions. [17] It is also hoped that recent findings from TFM will contribute to the design of optimal scaffolds for tissue engineering and regeneration of the peripheral nervous system, [18] artery grafts, [19] and epithelial skin cells. [20]
Force spectroscopy is a set of techniques for the study of the interactions and the binding forces between individual molecules. These methods can be used to measure the mechanical properties of single polymer molecules or proteins, or individual chemical bonds. The name "force spectroscopy", although widely used in the scientific community, is somewhat misleading, because there is no true matter-radiation interaction.
In biology, the extracellular matrix (ECM), also called intercellular matrix (ICM), is a network consisting of extracellular macromolecules and minerals, such as collagen, enzymes, glycoproteins and hydroxyapatite that provide structural and biochemical support to surrounding cells. Because multicellularity evolved independently in different multicellular lineages, the composition of ECM varies between multicellular structures; however, cell adhesion, cell-to-cell communication and differentiation are common functions of the ECM.
Mechanotaxis refers to the directed movement of cell motility via mechanical cues. In response to fluidic shear stress, for example, cells have been shown to migrate in the direction of the fluid flow. Mechanotaxis is critical in many normal biological processes in animals, such as gastrulation, inflammation, and repair in response to a wound, as well as in mechanisms of diseases such as tumor metastasis.
In cellular biology, durotaxis is a form of cell migration in which cells are guided by rigidity gradients, which arise from differential structural properties of the extracellular matrix (ECM). Most normal cells migrate up rigidity gradients.
In cell biology, focal adhesions are large macromolecular assemblies through which mechanical force and regulatory signals are transmitted between the extracellular matrix (ECM) and an interacting cell. More precisely, focal adhesions are the sub-cellular structures that mediate the regulatory effects of a cell in response to ECM adhesion.
Scanning ion-conductance microscopy (SICM) is a scanning probe microscopy technique that uses an electrode as the probe tip. SICM allows for the determination of the surface topography of micrometer and even nanometer-range structures in aqueous media conducting electrolytes. The samples can be hard or soft, are generally non-conducting, and the non-destructive nature of the measurement allows for the observation of living tissues and cells, and biological samples in general.
Digital image correlation and tracking is an optical method that employs tracking and image registration techniques for accurate 2D and 3D measurements of changes in images. This method is often used to measure full-field displacement and strains, and it is widely applied in many areas of science and engineering. Compared to strain gauges and extensometers, digital image correlation methods provide finer details about deformation, due to the ability to provide both local and average data.
Jamming is the physical process by which the viscosity of some mesoscopic materials, such as granular materials, glasses, foams, polymers, emulsions, and other complex fluids, increases with increasing particle density. The jamming transition has been proposed as a new type of phase transition, with similarities to a glass transition but very different from the formation of crystalline solids.
Lipid bilayer mechanics is the study of the physical material properties of lipid bilayers, classifying bilayer behavior with stress and strain rather than biochemical interactions. Local point deformations such as membrane protein interactions are typically modelled with the complex theory of biological liquid crystals but the mechanical properties of a homogeneous bilayer are often characterized in terms of only three mechanical elastic moduli: the area expansion modulus Ka, a bending modulus Kb and an edge energy . For fluid bilayers the shear modulus is by definition zero, as the free rearrangement of molecules within plane means that the structure will not support shear stresses. These mechanical properties affect several membrane-mediated biological processes. In particular, the values of Ka and Kb affect the ability of proteins and small molecules to insert into the bilayer. Bilayer mechanical properties have also been shown to alter the function of mechanically activated ion channels.
A model lipid bilayer is any bilayer assembled in vitro, as opposed to the bilayer of natural cell membranes or covering various sub-cellular structures like the nucleus. They are used to study the fundamental properties of biological membranes in a simplified and well-controlled environment, and increasingly in bottom-up synthetic biology for the construction of artificial cells. A model bilayer can be made with either synthetic or natural lipids. The simplest model systems contain only a single pure synthetic lipid. More physiologically relevant model bilayers can be made with mixtures of several synthetic or natural lipids.
Scanning electrochemical microscopy (SECM) is a technique within the broader class of scanning probe microscopy (SPM) that is used to measure the local electrochemical behavior of liquid/solid, liquid/gas and liquid/liquid interfaces. Initial characterization of the technique was credited to University of Texas electrochemist, Allen J. Bard, in 1989. Since then, the theoretical underpinnings have matured to allow widespread use of the technique in chemistry, biology and materials science. Spatially resolved electrochemical signals can be acquired by measuring the current at an ultramicroelectrode (UME) tip as a function of precise tip position over a substrate region of interest. Interpretation of the SECM signal is based on the concept of diffusion-limited current. Two-dimensional raster scan information can be compiled to generate images of surface reactivity and chemical kinetics.
The colloidal probe technique is commonly used to measure interaction forces acting between colloidal particles and/or planar surfaces in air or in solution. This technique relies on the use of an atomic force microscope (AFM). However, instead of a cantilever with a sharp AFM tip, one uses the colloidal probe. The colloidal probe consists of a colloidal particle of few micrometers in diameter that is attached to an AFM cantilever. The colloidal probe technique can be used in the sphere-plane or sphere-sphere geometries. One typically achieves a force resolution between 1 and 100 pN and a distance resolution between 0.5 and 2 nm.
Cellular adhesions can be defined as proteins or protein aggregates that form mechanical and chemical linkages between the intracellular and extracellular space. Adhesions serve several critical processes including cell migration, signal transduction, tissue development and repair. Due to this functionality, adhesions and adhesion molecules have been a topic of study within the scientific community. Specifically, it has been found that adhesions are involved in tissue development, plasticity, and memory formation within the central nervous system (CNS), and may prove vital in the generation of CNS-specific therapeutics.
The Optical Stretcher is a dual-beam optical trap that is used for trapping and deforming ("stretching") micrometer-sized soft matter particles, such as biological cells in suspension. The forces used for trapping and deforming objects arise from photon momentum transfer on the surface of the objects, making the Optical Stretcher – unlike atomic force microscopy or micropipette aspiration – a tool for contact-free rheology measurements.
Force Spectrum Microscopy (FSM) is an application of active microrheology developed to measure aggregate random forces in the cytoplasm. Large, inert flow tracers are injected into live cells and become lodged inside the cytoskeletal mesh, wherein it is oscillated by repercussions from active motor proteins. The magnitude of these random forces can be inferred from the frequency of oscillation of tracer particles. Tracking the fluctuations of tracer particles using optical microscopy can isolate the contribution of active random forces to intracellular molecular transport from that of Brownian motion.
Cell mechanics is a sub-field of biophysics that focuses on the mechanical properties and behavior of living cells and how it relates to cell function. It encompasses aspects of cell biophysics, biomechanics, soft matter physics and rheology, mechanobiology and cell biology.
Contact guidance refers to a phenomenon for which the orientation of cells and stress fibers is influenced by geometrical patterns such as nano/microgrooves on substrates, or collagen fibers in gels and soft tissues. This phenomenon was discovered in 1912, and the terminology was introduced in 1945, but it is with the development of tissue engineering that researchers drew increasing attention on this topic, seeing the potential of contact guidance in influencing the morphology and organization of cells. Nevertheless, the biological processes underlying contact guidance are still unclear.
Holotomography (HT) is a laser technique to measure the three-dimensional refractive index (RI) tomogram of a microscopic sample such as biological cells and tissues. Because the RI can serve as an intrinsic imaging contrast for transparent or phase objects, measurements of RI tomograms can provide label-free quantitative imaging of microscopic phase objects. In order to measure 3-D RI tomogram of samples, HT employs the principle of holographic imaging and inverse scattering. Typically, multiple 2D holographic images of a sample are measured at various illumination angles, employing the principle of interferometric imaging. Then, a 3D RI tomogram of the sample is reconstructed from these multiple 2D holographic images by inversely solving light scattering in the sample.
Physical oncology (PO) is defined as the study of the role of mechanical signals in a cancerous tumor. The mechanical signals can be forces, pressures. If we generalize we will speak of "stress field" and "stress tensor".
Cell biomechanics a branch of biomechanics that involves single molecules, molecular interactions, or cells as the system of interest. Cells generate and maintain mechanical forces within their environment as a part of their physiology. Cell biomechanics deals with how mRNA, protein production, and gene expression is affected by said environment and with mechanical properties of isolated molecules or interaction of proteins that make up molecular motors.