Qualified teams
| Group | Winners (Seeded in quarter final draw) | Runners-up (Unseeded in quarter final draw) |
|---|---|---|
| A |  PKNP |  Pahang |
| B | Perak | FELDA United |
| C |  Kedah |  Melaka United |
| D |  Johor Darul Ta'zim |  Selangor |
The 2017 Malaysia Cup knockout phase began on 15 September 2017 and concluded on 4 November 2017 with the final at Shah Alam Stadium in Selangor, Malaysia to decide the champions of the 2017 Malaysia Cup. A total of 8 teams competed in the knockout phase.
The draw for the 2017 Malaysia Cup was held on at the 22 May 2017 with the participating team coaches and captains in attendance.
| Round | Draw date and time | First leg | Second leg |
|---|---|---|---|
| Quarter-finals | 22 May 2017, 22:30 UTC+8 | 15–16 September 2017 | 24 September 2017 |
| Semi-finals | 15 October 2017 | 21 October 2017 | |
| Final | 4 November 2017 at Shah Alam Stadium, Shah Alam, Selangor | ||
The knockout phase involved the eight teams which qualified as winners and runners-up of each of the eight groups in the group stage.
Each tie in the knockout phase, apart from the final, was played over two legs, with each team playing one leg at home. The team that scored more goals on aggregate over the two legs advanced to the next round. If the aggregate score was level, the away goals rule was applied, i.e. the team that scored more goals away from home over the two legs advanced. If away goals were also equal, then thirty minutes of extra time was played. The away goals rule was again applied after extra time, i.e. if there were goals scored during extra time and the aggregate score was still level, the visiting team advanced by virtue of more away goals scored. If no goals were scored during extra time, the tie was decided by penalty shoot-out. In the final, which was played as a single match, if scores were level at the end of normal time, extra time was played, followed by penalty shoot-out if scores remained tied.
The mechanism of the draws for each round was as follows:
| Group | Winners (Seeded in quarter final draw) | Runners-up (Unseeded in quarter final draw) |
|---|---|---|
| A | PKNP | Pahang |
| B | Perak | FELDA United |
| C | Kedah | Melaka United |
| D | Johor Darul Ta'zim | Selangor |
| Quarter-finals | Semi-finals | Final | ||||||||||||||||
| B2 | FELDA United | 1 | 4 | 5 | ||||||||||||||
| A1 | PKNP | 3 | 1 | 4 | ||||||||||||||
| FELDA United | 1 | 0 | 1 | |||||||||||||||
| Kedah | 1 | 2 | 3 | |||||||||||||||
| D2 | Selangor | 2 | 0 | 2 | ||||||||||||||
| C1 | Kedah | 3 | 1 | 4 | ||||||||||||||
| Kedah | 0 | |||||||||||||||||
| Johor Darul Ta'zim | 2 | |||||||||||||||||
| A2 | Pahang | 3 | 0 | 3 | ||||||||||||||
| B1 | Perak | 1 | 4 | 5 | ||||||||||||||
| Perak | 1 | 0 | 1 | |||||||||||||||
| Johor Darul Ta'zim | 1 | 3 | 4 | |||||||||||||||
| c2 | Melaka United | 1 | 1 | 2 | ||||||||||||||
| D1 | Johor Darul Ta'zim | 4 | 1 | 5 | ||||||||||||||
The first legs were played on 15 & 16 September 2017, and the second legs were played on 24 September 2017.
| Team 1 | Agg. | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| FELDA United | 5–4 | PKNP | 1–3 | 4–1 |
| Selangor | 2–4 | Kedah | 2–3 | 0–1 |
| Melaka United | 2–5 | Johor Darul Ta'zim | 1–4 | 1–1 |
| Pahang | 3–5 | Perak | 3–1 | 0–4 |
First Leg
| FELDA United | 1–3 | PKNP |
|---|---|---|
Hadin  77' | Report | Shahrel 11', 45', 68' |
Second Leg
FELDA United won 5–4 on aggregate.
First Leg
Second Leg
Kedah won 4–2 on aggregate.
First Leg
| Melaka United | 1–4 | Johor Darul Ta'zim |
|---|---|---|
| Šimić 45+1' | Report | Ghaddar 7', 34' Insa 68'Safiq 85' |
Second Leg
| Johor Darul Ta'zim | 1–1 | Melaka United |
|---|---|---|
| Nazmi 21' | Report | Felipe 44' (pen.) |
Johor Darul Ta'zim won 5–2 on aggregate.
First Leg
Second Leg
Perak won 5–3 on aggregate.
The first legs were played on 15 October 2017, and the second legs were played on 21 October 2017.
| Team 1 | Agg. | Team 2 | 1st leg | 2nd leg |
|---|---|---|---|---|
| FELDA United | 1–3 | Kedah | 1–1 | 0–2 |
| Perak | 1–4 | Johor Darul Ta'zim | 1–1 | 0–3 |
First Leg
Second Leg
| Kedah | 2–0 | FELDA United |
|---|---|---|
| Sandro 71', 86' | Report |
Kedah won 3–1 on aggregate.
First Leg
Second Leg
| Johor Darul Ta'zim | 3–0 | Perak |
|---|---|---|
| Cabrera 57', 81' Guerra 75' | Report |
Johor Darul Ta'zim won 4–1 on aggregate.
The final will be played on 4 November 2017 at the Shah Alam Stadium in Selangor, Malaysia.
| Kedah | 0–2 | Johor Darul Ta'zim |
|---|---|---|
| Report | Aidil 3' Cabrera 63' |
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