Barend Mons

Last updated

Barend Mons
Barend Mons.jpg
Born1957 (age 6667)
The Hague, Netherlands
Known for
Awards Order of the Netherlands Lion (2024) Eijkman Medal for Tropical Medicine Research (1988)
Scientific career
Institutions
Thesis Intra erythrocytic differentiation of Plasmodium Berghei  (1986)
Websitewww.go-fair.org; www.gofairfoundation.org; www.gofairfoundation.org/lifes

Barend Mons (born 1957, The Hague) is a molecular biologist and a FAIR data specialist. The first decade of his scientific career he spent on fundamental research on malaria parasites and later on translational research for malaria vaccines. In the year 2000 he switched to advanced data stewardship and (biological) systems analytics. He is most known for innovations in scholarly collaboration, especially nanopublications, and knowledge graph based discovery.

In 2012 Barend was appointed full Professor in biosemantics in the Department of Human Genetics at the Leiden University Medical Center (LUMC) in The Netherlands. [1] [2] [3] In 2014 he organised the seminal FAIR conference at the Lorentz centre that led to the FAIR data initiative and GO FAIR. In 2015 he was appointed chair of the High Level Expert Group on the European Open Science Cloud.

From 2018 to 2023 Barend was the elected president of CODATA, the affiliated organisation on research data related issues of the International Science Council. He has also been the European representative in the Board on Research Data and Information (BRDI) of the National Academies of Sciences, Engineering, and Medicine in the USA. In 2023 he was also appointed professor at the Leiden Academic Centre for Drug Research.

In 2024, he was appointed as Fellow of the International Science Council. At his retirement in 2024 he was Knighted by the Dutch King in the ‘Order of the Netherlands Lion’, the oldest and highest reward for cultural and scientific contributions to the international society.

Barend is a frequent keynote speaker about FAIR and open science around the world, and continues to participate in various national and international boards.

Education

Mons was awarded a Masters (1981 Cum Laude) and a PhD (1986) from Leiden University on cellular and molecular biology of the malaria parasite Plasmodium berghei , [4] and has worked for more than ten years on the genetic differentiation of malaria parasites and vaccine research, [5] [6] [7] [8] publishing over 45 research articles. [1]

Barend was one of the designers and coordinators of the transformational Innovative Medicines Initiative (IMI) project known as Open PHACTS, [9] [10] pioneering the use of semantic technologies, nanopublications and micro-attributions in pharmaceutical biomedical research. From 2013 to 2015 he acted as Head of Node of the Dutch Node in ELIXIR. In 2014, he initiated the FAIR Data initiative [11] and in 2015 he was appointed Chair of the High Level Expert Group for the European Open Science Cloud.

Related Research Articles

<span class="mw-page-title-main">Malaria</span> Mosquito-borne infectious disease

Malaria is a mosquito-borne infectious disease that affects vertebrates. Human malaria causes symptoms that typically include fever, fatigue, vomiting, and headaches. In severe cases, it can cause jaundice, seizures, coma, or death. Symptoms usually begin 10 to 15 days after being bitten by an infected Anopheles mosquito. If not properly treated, people may have recurrences of the disease months later. In those who have recently survived an infection, reinfection usually causes milder symptoms. This partial resistance disappears over months to years if the person has no continuing exposure to malaria.

<i>Plasmodium falciparum</i> Protozoan species of malaria parasite

Plasmodium falciparum is a unicellular protozoan parasite of humans, and the deadliest species of Plasmodium that causes malaria in humans. The parasite is transmitted through the bite of a female Anopheles mosquito and causes the disease's most dangerous form, falciparum malaria. It is responsible for around 50% of all malaria cases. P. falciparum is therefore regarded as the deadliest parasite in humans. It is also associated with the development of blood cancer and is classified as a Group 2A (probable) carcinogen.

<i>Plasmodium knowlesi</i> Species of single-celled organism

Plasmodium knowlesi is a parasite that causes malaria in humans and other primates. It is found throughout Southeast Asia, and is the most common cause of human malaria in Malaysia. Like other Plasmodium species, P. knowlesi has a life cycle that requires infection of both a mosquito and a warm-blooded host. While the natural warm-blooded hosts of P. knowlesi are likely various Old World monkeys, humans can be infected by P. knowlesi if they are fed upon by infected mosquitoes. P. knowlesi is a eukaryote in the phylum Apicomplexa, genus Plasmodium, and subgenus Plasmodium. It is most closely related to the human parasite Plasmodium vivax as well as other Plasmodium species that infect non-human primates.

<i>Plasmodium berghei</i> Single celled parasite, rodent malaria

Plasmodium berghei is a single-celled parasite causing rodent malaria. It is in the Plasmodium subgenus Vinckeia.

<span class="mw-page-title-main">Malaria culture</span> Method for growing malaria parasites outside the body

Malaria culture is a method for growing malaria parasites outside the body, i.e., in an ex vivo environment. Although attempts for propagation of the parasites outside of humans or animal models reach as far back as 1912, the success of the initial attempts was limited to one or just a few cycles. The first successful continuous culture was established in 1976. Initial hopes that the ex vivo culture would lead quickly to the discovery of a vaccine were premature. However, the development of new drugs was greatly facilitated.

Vinckeia is a subgenus of the genus Plasmodium — all of which are parasitic alveolates. The subgenus Vinckeia was created by Cyril Garnham in 1964 to accommodate the mammalian parasites other than those infecting the primates.

Malaria vaccines are vaccines that prevent malaria, a mosquito-borne infectious disease which affected an estimated 249 million people globally in 85 malaria endemic countries and areas and caused 608,000 deaths in 2022. The first approved vaccine for malaria is RTS,S, known by the brand name Mosquirix. As of April 2023, the vaccine has been given to 1.5 million children living in areas with moderate-to-high malaria transmission. It requires at least three doses in infants by age 2, and a fourth dose extends the protection for another 1–2 years. The vaccine reduces hospital admissions from severe malaria by around 30%.

ChemSpider is a freely accessible online database of chemicals owned by the Royal Society of Chemistry. It contains information on more than 100 million molecules from over 270 data sources, each of them receiving a unique identifier called ChemSpider Identifier.

Avian malaria is a parasitic disease of birds, caused by parasite species belonging to the genera Plasmodium and Hemoproteus. The disease is transmitted by a dipteran vector including mosquitoes in the case of Plasmodium parasites and biting midges for Hemoproteus. The range of symptoms and effects of the parasite on its bird hosts is very wide, from asymptomatic cases to drastic population declines due to the disease, as is the case of the Hawaiian honeycreepers. The diversity of parasites is large, as it is estimated that there are approximately as many parasites as there are species of hosts. As research on human malaria parasites became difficult, Dr. Ross studied avian malaria parasites. Co-speciation and host switching events have contributed to the broad range of hosts that these parasites can infect, causing avian malaria to be a widespread global disease, found everywhere except Antarctica.

<span class="mw-page-title-main">History of malaria</span>

The history of malaria extends from its prehistoric origin as a zoonotic disease in the primates of Africa through to the 21st century. A widespread and potentially lethal human infectious disease, at its peak malaria infested every continent except Antarctica. Its prevention and treatment have been targeted in science and medicine for hundreds of years. Since the discovery of the Plasmodium parasites which cause it, research attention has focused on their biology as well as that of the mosquitoes which transmit the parasites.

Pregnancy-associated malaria (PAM) or placental malaria is a presentation of the common illness that is particularly life-threatening to both mother and developing fetus. PAM is caused primarily by infection with Plasmodium falciparum, the most dangerous of the four species of malaria-causing parasites that infect humans. During pregnancy, a woman faces a much higher risk of contracting malaria and of associated complications. Prevention and treatment of malaria are essential components of prenatal care in areas where the parasite is endemic – tropical and subtropical geographic areas. Placental malaria has also been demonstrated to occur in animal models, including in rodent and non-human primate models.

The term microattribution is defined as "giving database accessions the same citation conventions and indices that journal articles currently enjoy". In the sense that the purpose of precise attribution is to extend the scholarly convention of giving citation credit, the provenance of a piece of scholarship is recognized to give credit and priority to a preceding author. Microattribution is thus defined as "a scholarly contribution smaller than a journal article being ascribed to a particular author" or a small scholarly contribution being ascribed to a particular author. Since data accessions can describe contributions that can vastly exceed research articles in size and quality, quantum attribution or precise citation might be better terms.

<span class="mw-page-title-main">RTS,S</span> Malaria vaccine

RTS,S/AS01 is a recombinant protein-based malaria vaccine. It is one of two malaria vaccines approved. As of April 2022, the vaccine has been given to 1 million children living in areas with moderate-to-high malaria transmission, with millions more doses to be provided as the vaccine's production expands. 18 million doses have been allocated for 2023-2025. It requires at least three doses in infants by age 2, with a fourth dose extending the protection for another 1–2 years. The vaccine reduces hospital admissions from severe malaria by around 30% and reduces toddler deaths by 15%.

Open PHACTS was a European initiative public–private partnership between academia, publishers, enterprises, pharmaceutical companies and other organisations working to enable better, cheaper and faster drug discovery. It has been funded by the Innovative Medicines Initiative, selected as part of three projects to "design methods for common standards and sharing of data for more efficient drug development and patient treatment in the future".

Circumsporozoite protein (CSP) is a secreted protein of the sporozoite stage of the malaria parasite and is the antigenic target of RTS,S and other malaria vaccines. The amino-acid sequence of CSP consists of an immunodominant central repeat region flanked by conserved motifs at the N- and C- termini that are implicated in protein processing as the parasite travels from the mosquito to the mammalian vector. The amino acid sequence of CSP was determined in 1984.

Sanaria is a biotechnology company founded to develop whole-parasite vaccines protective against malaria. Sanaria is also developing monoclonal antibodies protective against malaria, vaccines against diarrheal diseases, immunotherapeutics for disease of the liver, and related products for us in malaria research. Sanaria's vaccines are based on the use of the sporozoite (SPZ) stage of the malaria parasite, Plasmodium, as an immunogen, and as a carrier for immunomodulatory molecules.

Ruth Sonntag Nussenzweig was an Austrian-Brazilian immunologist specializing in the development of malaria vaccines. In a career spanning over 60 years, she was primarily affiliated with New York University (NYU). She served as C.V. Starr Professor of Medical and Molecular Parasitology at Langone Medical Center, Research Professor at the NYU Department of Pathology, and finally Professor Emerita of Microbiology and Pathology at the NYU Department of Microbiology.

<span class="mw-page-title-main">Rita Tewari</span> Molecular parasitologist

Rita Tewari is an Indian parasitologist who studies the cell and molecular biology of malaria. She currently holds a post as professor at the University of Nottingham.

Irène Landau is a French parasitologist and professor emeritus at the National Museum of Natural History, France (MNHN) and Centre national de la recherche scientifique.

Sanjeev Krishna,, is a British physician and parasitologist whose research focuses on affordable diagnosis and treatment of diseases such as COVID-19, malaria, Ebola, African trypanosomiasis, leishmaniasis, and colorectal cancer. Krishna is Professor of Medicine and Molecular Parasitology at St George's, University of London and St George's Hospital.

References

  1. 1 2 Barend Mons publications indexed by Google Scholar
  2. Barend Mons's publications indexed by the Scopus bibliographic database. (subscription required)
  3. Barend Mons publications from Europe PubMed Central
  4. Mons, B. (1986). "Intra erythrocytic differentiation of Plasmodium berghei". Acta Leidensia. 54: 1–124. PMID   3538746.
  5. Mons, B.; Klasen, E.; Van Kessel, R.; Nchinda, T. (1998). "Biomedicine: Partnership Between South and North Crystallizes Around Malaria". Science. 279 (5350): 498–499. Bibcode:1998Sci...279..498M. doi:10.1126/science.279.5350.498. PMID   9454348. S2CID   42396771.
  6. Bruno, J. M.; Feachem, R.; Godal, T.; Nchinda, T.; Ogilvie, B.; Mons, B.; Mshana, R.; Radda, G.; Samba, E.; Schwartz, M.; Varmus, H.; Diallo, S.; Doumbo, O.; Greenwood, B.; Kilama, W.; Miller, L. H.; Da Silva, L. P. (1997). "The spirit of Dakar: A call for action on malaria". Nature. 386 (6625): 541. Bibcode:1997Natur.386..541.. doi: 10.1038/386541a0 . PMID   9121571. S2CID   4265060.
  7. Mons, B. (March 1997). "The problem of multiplicity in malaria vaccine development". Annals of Tropical Medicine & Parasitology. 91 (sup1): S55–S58. doi:10.1080/00034983.1997.11813239.
  8. Mäkelä, H; Mons, B; Roumiantzeff, M; Wigzell, H (May 1996). "Report of the Expert Panel X Animals models for vaccines to prevent infectious diseases". Vaccine. 14 (7): 717–732. doi:10.1016/s0264-410x(96)90052-3. PMID   8799983.
  9. Williams, Antony J.; Harland, Lee; Groth, Paul; Pettifer, Stephen; Chichester, Christine; Willighagen, Egon L.; Evelo, Chris T.; Blomberg, Niklas; Ecker, Gerhard; Goble, Carole; Mons, Barend (November 2012). "Open PHACTS: semantic interoperability for drug discovery". Drug Discovery Today. 17 (21–22): 1188–1198. doi: 10.1016/j.drudis.2012.05.016 . PMID   22683805.
  10. Mons, Barend; van Haagen, Herman; Chichester, Christine; Hoen, Peter-Bram 't; den Dunnen, Johan T; van Ommen, Gertjan; van Mulligen, Erik; Singh, Bharat; Hooft, Rob; Roos, Marco; Hammond, Joel; Kiesel, Bruce; Giardine, Belinda; Velterop, Jan; Groth, Paul; Schultes, Erik (April 2011). "The value of data". Nature Genetics. 43 (4): 281–283. doi: 10.1038/ng0411-281 . PMID   21445068. S2CID   20891055.
  11. Wilkinson, Mark D.; Dumontier, Michel; Aalbersberg, IJsbrand Jan; Appleton, Gabrielle; Axton, Myles; Baak, Arie; Blomberg, Niklas; Boiten, Jan-Willem; da Silva Santos, Luiz Bonino; Bourne, Philip E.; Bouwman, Jildau; Brookes, Anthony J.; Clark, Tim; Crosas, Mercè; Dillo, Ingrid; Dumon, Olivier; Edmunds, Scott; Evelo, Chris T.; Finkers, Richard; Gonzalez-Beltran, Alejandra; Gray, Alasdair J. G.; Groth, Paul; Goble, Carole; Grethe, Jeffrey S.; Heringa, Jaap; ’t Hoen, Peter A. C.; Hooft, Rob; Kuhn, Tobias; Kok, Ruben; Kok, Joost; Lusher, Scott J.; Martone, Maryann E.; Mons, Albert; Packer, Abel L.; Persson, Bengt; Rocca-Serra, Philippe; Roos, Marco; van Schaik, Rene; Sansone, Susanna-Assunta; Schultes, Erik; Sengstag, Thierry; Slater, Ted; Strawn, George; Swertz, Morris A.; Thompson, Mark; van der Lei, Johan; van Mulligen, Erik; Velterop, Jan; Waagmeester, Andra; Wittenburg, Peter; Wolstencroft, Katherine; Zhao, Jun; Mons, Barend (15 March 2016). "The FAIR Guiding Principles for scientific data management and stewardship". Scientific Data. 3 (1): 160018. Bibcode:2016NatSD...360018W. doi:10.1038/sdata.2016.18. PMC   4792175 . PMID   26978244.