Institute for Systems Biology

Last updated
Institute for Systems Biology
TypeNon-profit
IndustryBiology
Founded2000
Founder Leroy Hood, Alan Aderem, Ruedi Aebersold
Headquarters
Seattle, Washington
,
United States
Area served
Systems Biology
Key people
James R. Heath, PhD, President
Leroy Hood, MD, PhD, Chief Strategy Officer and Co-founder
Nitin Baliga, PhD, Senior Vice President and Director
Nathan Price, PhD, Associate Director
Number of employees
230
Website http://www.isbscience.org
This is the front entrance of Institute for Systems Biology in Seattle's South Lake Union neighborhood at 401 Terry Ave. N. ISB Headquarters in South Lake Union.jpg
This is the front entrance of Institute for Systems Biology in Seattle's South Lake Union neighborhood at 401 Terry Ave. N.

Institute for Systems Biology (ISB) is a non-profit research institution located in Seattle, Washington, United States. [1] ISB concentrates on systems biology, the study of relationships and interactions between various parts of biological systems, and advocates an interdisciplinary approach to biological research. [2]

Contents

Goals

Systems biology is the study of biological systems in a holistic manner by integrating data at all levels of the biological information hierarchy, from global down to the individual organism, and below down to the molecular level. The vision of ISB is to integrate these concepts using a cross-disciplinary approach combining the efforts of biologists, chemists, computer scientists, engineers, mathematicians, physicists, and physicians. [2]

On its website, ISB has defined four areas of focus: [3]

Early history

Leroy Hood, 2008 Leroy Hood podium PITT2008.JPG
Leroy Hood, 2008
Alan Aderem, 2012 Aderem 00044.jpg
Alan Aderem, 2012
Ruedi Aebersold, 2012 Ruedi Aebersold 2012.JPG
Ruedi Aebersold, 2012

Leroy Hood co-founded the Institute with Alan Aderem and Ruedi Aebersold in 2000. [1]

However, the story of how ISB got started actually begins in 1990. [4] Lee Hood was the director of a large molecular biotechnology lab at the California Institute of Technology in Pasadena, and was a key advisor in the Human Genome Project, having overseen development of machines that were instrumental to its later success. The University of Washington (UW), like many other universities, was eager to recruit Hood, but had neither the space nor the money to accommodate Hood's large laboratory. [4]

Lee Huntsman, director of University of Washington's Center for Bioengineering, was attending a University of Washington football game, sharing a luxury box with Bill Gates, the former CEO and current chairman of Microsoft. Huntsman took the opportunity to tell Gates about Hood. Bill Gates already had a considerable interest in biotechnology, both as a philanthropist and as an investor, and after meeting Hood, donated $12 million to UW to enable him to head a new department of molecular biotechnology, [4] where Hood continues to hold a faculty position as the Gates Professor of Molecular Biotechnology. [5]

ISB represents a spin-off of Hood's labs at UW. [6]

Achievements

ISB is in the top ranks of scientific institutions worldwide. In 2012, the SCImago Research Group, based in Spain, ranked ISB 4th worldwide on its Excellence Rate scale. [7]

ISB currently hosts 12 research groups with expertise ranging across genetics, microbial genetics, complex molecular machines, macromolecular complexes, gene regulatory networks, immunology, molecular and cell biology, cancer biology, genomics, proteomics, protein chemistry, computational biology and biotechnology. [1] The ISB website lists 985 peer-reviewed publications for the years 2000 through early 2012. [8]

In late 2005, ISB began to emphasize the application of systems biology to P4 medicine (predictive, preventive, personalized, participatory), i.e. the development of techniques for predicting and preventing disease, possibly before patients even know they are sick. The P4 Medicine institute was co-founded in 2010 by ISB and Ohio State University. [9]

The Education and Outreach efforts of ISB include creating the Logan Center for Education whose mission is to enable educators to produce STEM literate students. [10] ISB offers paid research internships for high school and undergraduate students, and offers advanced systems science courses throughout the year.

ISB partnered in several high-profile research projects, the most significant one thus far being with the Grand Duchy of Luxembourg to create the Center for Systems Biology Luxembourg [11] and the Seattle Proteome Center. [12]

ISB faculty members have launched several companies, including: Cytopeia (acquired by BD in 2008), Integrated Diagnostics, [13] Macrogenics, [14] NanoString Technologies, [15] and Accelerator Corporation. [16] Accelerator Corporation, in particular, is an investment company that provides venture capital funding and management for biotech startup companies. Its portfolio companies and graduates have focused on improved biotherapeutics, vaccines, biomarkers and other such products.

See also

Related Research Articles

<span class="mw-page-title-main">University of Washington</span> Public university in Seattle, Washington, US

The University of Washington is a public research university in Seattle, Washington. Founded in 1861, approximately a decade after the founding of Seattle, the University of Washington is one of the oldest universities on the West Coast of the United States.

<span class="mw-page-title-main">Proteomics</span> Large-scale study of proteins

Proteomics is the large-scale study of proteins. Proteins are vital parts of living organisms, with many functions such as the formation of structural fibers of muscle tissue, enzymatic digestion of food, or synthesis and replication of DNA. In addition, other kinds of proteins include antibodies that protect an organism from infection, and hormones that send important signals throughout the body.

<span class="mw-page-title-main">National Center for Biotechnology Information</span> Database branch of the US National Library of Medicine

The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 through legislation sponsored by US Congressman Claude Pepper.

<span class="mw-page-title-main">Michael Smith (chemist)</span> British-born Canadian biochemist, businessman and Nobel Prize laureate (1932–2000)

Michael Smith was a British-born Canadian biochemist and businessman. He shared the 1993 Nobel Prize in Chemistry with Kary Mullis for his work in developing site-directed mutagenesis. Following a PhD in 1956 from the University of Manchester, he undertook postdoctoral research with Har Gobind Khorana at the British Columbia Research Council in Vancouver, British Columbia, Canada. Subsequently, Smith worked at the Fisheries Research Board of Canada Laboratory in Vancouver before being appointed a professor of biochemistry in the UBC Faculty of Medicine in 1966. Smith's career included roles as the founding director of the UBC Biotechnology Laboratory and the founding scientific leader of the Protein Engineering Network of Centres of Excellence (PENCE). In 1996 he was named Peter Wall Distinguished Professor of Biotechnology. Subsequently, he became the founding director of the Genome Sequencing Centre at the BC Cancer Research Centre.

<span class="mw-page-title-main">Leroy Hood</span> American biologist (born 1938)

Leroy "Lee" Edward Hood is an American biologist who has served on the faculties at the California Institute of Technology (Caltech) and the University of Washington. Hood has developed ground-breaking scientific instruments which made possible major advances in the biological sciences and the medical sciences. These include the first gas phase protein sequencer (1982), for determining the sequence of amino acids in a given protein; a DNA synthesizer (1983), to synthesize short sections of DNA; a peptide synthesizer (1984), to combine amino acids into longer peptides and short proteins; the first automated DNA sequencer (1986), to identify the order of nucleotides in DNA; ink-jet oligonucleotide technology for synthesizing DNA and nanostring technology for analyzing single molecules of DNA and RNA.

<span class="mw-page-title-main">Fred Hutchinson Cancer Center</span> Cancer research institute in Seattle, US

The Fred Hutchinson Cancer Center, formerly known as the Fred Hutchinson Cancer Research Center and also known as Fred Hutch or The Hutch, is a cancer research institute established in 1975 in Seattle, Washington.

UMass Chan Medical School is a public medical school in Worcester, Massachusetts. It is part of the University of Massachusetts system. It is home to three schools: the T.H. Chan School of Medicine, the Morningside Graduate School of Biomedical Sciences, and the Tan Chingfen Graduate School of Nursing, as well as a biomedical research enterprise and a range of public-service initiatives throughout the state.

<span class="mw-page-title-main">Human Proteome Folding Project</span> World Community Grid volunteer computing project

The Human Proteome Folding Project (HPF) is a collaborative effort between New York University, the Institute for Systems Biology (ISB) and the University of Washington, using the Rosetta software developed by the Rosetta Commons. The project is managed by the Bonneau lab.

<span class="mw-page-title-main">State Research Center of Virology and Biotechnology VECTOR</span> Russian government public health agency

The State Research Center of Virology and Biotechnology VECTOR, also known as the Vector Institute, is a biological research center in Koltsovo, Novosibirsk Oblast, Russia. It has research facilities and capabilities for all levels of biological hazard, CDC levels 1–4. It is one of two official repositories for the now-eradicated smallpox virus, and was part of the system of laboratories known as the Biopreparat.

The University of Washington Department of Global Health is a department jointly run by the schools of Medicine and Public Health at the University of Washington in Seattle, Washington. Its aim is to provide a multidisciplinary venue to address issues of global health at the university.

<span class="mw-page-title-main">L'Oréal-UNESCO For Women in Science Awards</span> Scientific award

The L'Oréal-UNESCO For Women in Science Awards, created in 1998, aim to improve the position of women in science by recognizing outstanding women researchers who have contributed to scientific progress. The awards are a result of a partnership between the French company L'Oréal and the United Nations Educational, Scientific and Cultural Organization (UNESCO) and carry a grant of $100,000 USD for each laureate. This award is also known as the L'Oréal-UNESCO Women in Science Awards.

The Association of Biomolecular Resource Facilities (ABRF) is dedicated to advancing core and research biotechnology laboratories through research, communication, and education. ABRF members include over 2000 scientists representing 340 different core laboratories in 41 countries, including those in industry, government, academic and research institutions.

<span class="mw-page-title-main">Ruedi Aebersold</span> Swiss biologist (born 1954)

Rudolf Aebersold is a Swiss biologist, regarded as a pioneer in the fields of proteomics and systems biology. He has primarily researched techniques for measuring proteins in complex samples, in many cases via mass spectrometry. Ruedi Aebersold is a professor of Systems biology at the Institute of Molecular Systems Biology (IMSB) in ETH Zurich. He was one of the founders of the Institute for Systems Biology in Seattle, Washington, where he previously had a research group.

<span class="mw-page-title-main">Alan Aderem</span> American biologist

Alan Aderem is an American biologist, specializing in immunology and cell biology. Aderem's particular focus is the innate immune system, the part of the immune system that responds generically to pathogens. His laboratory's research focuses on diseases afflicting citizens of resource poor countries, including AIDS, malaria, tuberculosis and influenza.

Gilbert S. Omenn is an American medical doctor and researcher. He currently is the Harold T. Shapiro Distinguished University Professor at the University of Michigan; professor of Computational medicine & bioinformatics, Molecular medicine & genetics, Human genetics, and Public health; and the Director of the UM Center for Computational Medicine & Bioinformatics. He is the discover of Omenn syndrome, a genetic disorder that is fatal in infancy unless treated. Omenn has served as editor of the Annual Review of Public Health from 1990–1996. and as president of the American Association for the Advancement of Science (AAAS). He has published more than 600 peer-reviewed papers and reviews and is the author or editor of 18 books.

Hannele Ruohola-Baker is a Professor of Biochemistry and Associate Director of the Institute for Stem Cell and Regenerative Medicine at the University of Washington in Seattle, Washington. Her research focuses on the molecular biology of stem cells and on the use of Drosophila as model organisms for human diseases.

Patrick D'Silva is an Indian cell biologist, biochemist, and an associate professor at the Molecular Chaperone Lab of the Indian Institute of Science. He is known for his medical discoveries related to neurodegenerative diseases and cancer biology. The Department of Biotechnology of the Government of India awarded him the National Bioscience Award for Career Development, one of the highest Indian science awards, for his contributions to biosciences, in 2014.

Ganesh Nagaraju is an Indian biochemist, geneticist, cancer biologist and a full professor at the Department of Biochemistry of the Indian Institute of Science. He has been studying DNA damage responses in mammalian cells, and mechanisms underlying chromosome instability genetic diseases and cancer. The Department of Biotechnology of the Government of India awarded him the National Bioscience Award for Career Development, for his contributions to biosciences, in 2015. In 2018, Nagaraju received the Shanti Swarup Bhatnagar Prize for Science and Technology in Biological Sciences from CSIR. This award is given in recognition of outstanding contributions to Science and Technology, and is considered one of the highest awards for science in India.

<span class="mw-page-title-main">Jared Roach</span> American biologist

Jared C. Roach is an American biologist who invented the pairwise end sequencing strategy while a graduate student at the University of Washington.

References

  1. 1 2 3 "Institute for Systems Biology - Home". Institute for Systems Biology. Retrieved 17 March 2012.
  2. 1 2 Hood, L.; Rowen, L.; Galas, D. J.; Aitchison, J. D. (2008). "Systems biology at the Institute for Systems Biology". Briefings in Functional Genomics and Proteomics. 7 (4): 239–248. doi: 10.1093/bfgp/eln027 . PMID   18579616.
  3. "Institute for Systems Biology - Research". Institute for Systems Biology. Retrieved 17 March 2012.
  4. 1 2 3 Dietrich, Bill (9 February 1992). "Future Perfect -- Thanks To Bill Gates' $12-Million Endowment, Scientist Leroy Hood Continues His Search For A New Genetic Destiny". The Seattle Times. Retrieved 17 March 2012.
  5. "Department of Molecular Biotechnology". University of Washington. Retrieved 17 March 2012.
  6. "Revolutionary New Science". Institute for Science, Engineering and Public Policy. Retrieved 17 March 2012.
  7. "SCImago Research Group". SCImago Research Group. Retrieved 21 March 2012.
  8. "Institute for Systems Biology - Publications". Institute for Systems Biology. Retrieved 17 March 2012.
  9. "P4 Medicine Institute" . Retrieved 17 March 2012.
  10. "Logan Center for Education". Institute for Systems Biology. Retrieved 8 December 2015.
  11. Tartakoff, Joseph (5 June 2008). "Seattle, Luxembourg research projects set". Seattlepi.com (Seattle Post-Intelligencer). Retrieved 17 March 2012.
  12. "Seattle Proteome Center". Seattle Proteome Center. Retrieved 17 March 2012.
  13. "Integrated Diagnostics" . Retrieved 17 March 2012.
  14. "Macrogenics" . Retrieved 17 March 2012.
  15. "NanoString" . Retrieved 17 March 2012.
  16. "Accelerator Corporation" . Retrieved 17 March 2012.