PDE1B

PDE1B
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1TAZ, 4NPV, 4NPW, 5B25
Identifiers
Aliases	PDE1B , PDE1B1, PDES1B, HEL-S-79p, phosphodiesterase 1B
External IDs	OMIM: 171891; MGI: 97523; HomoloGene: 37370; GeneCards: PDE1B; OMA:PDE1B - orthologs
Gene location (Human) Chr. Chromosome 12 (human) [1] Band 12q13.2 Start 54,549,601 bp [1] End 54,579,239 bp [1]
Gene location (Mouse) Chr. Chromosome 15 (mouse) [2] Band 15|15 F3 Start 103,411,461 bp [2] End 103,438,479 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in caudate nucleus nucleus accumbens putamen gastric mucosa right frontal lobe prefrontal cortex Descending thoracic aorta Brodmann area 9 cingulate gyrus anterior cingulate cortex Top expressed in olfactory tubercle nucleus accumbens superior frontal gyrus globus pallidus ventricular zone perirhinal cortex granulocyte entorhinal cortex dentate gyrus of hippocampal formation granule cell superior colliculus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function 3',5'-cyclic-nucleotide phosphodiesterase activity metal ion binding calmodulin binding cyclic-nucleotide phosphodiesterase activity calmodulin-dependent cyclic-nucleotide phosphodiesterase activity protein binding phosphoric diester hydrolase activity hydrolase activity calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity 3',5'-cyclic-AMP phosphodiesterase activity 3',5'-cyclic-GMP phosphodiesterase activity Cellular component cytoplasm soma cytosol Biological process visual learning regulation of neurotransmitter levels cAMP catabolic process locomotory behavior response to amphetamine serotonin metabolic process monocyte differentiation regulation of dopamine metabolic process cellular response to macrophage colony-stimulating factor stimulus cGMP catabolic process cellular response to granulocyte macrophage colony-stimulating factor stimulus apoptotic process signal transduction G protein-coupled receptor signaling pathway Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 5153 18574 Ensembl ENSG00000123360 ENSMUSG00000022489 UniProt Q01064 Q01065 RefSeq (mRNA) NM_000924 NM_001165975 NM_001288768 NM_001288769 NM_001315534 NM_001315535 NM_001285890 NM_008800 NM_001357980 RefSeq (protein) NP_000915 NP_001159447 NP_001275697 NP_001275698 NP_001302463 NP_001302464 NP_001272819 NP_032826 NP_001344909 Location (UCSC) Chr 12: 54.55 – 54.58 Mb Chr 15: 103.41 – 103.44 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B is an enzyme that in humans is encoded by the PDE1B gene. ^{[5] [6] [7]}

References

1. GRCh38: Ensembl release 89: ENSG00000123360 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000022489 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Jiang X, Li J, Paskind M, Epstein PM (Nov 1996). "Inhibition of calmodulin-dependent phosphodiesterase induces apoptosis in human leukemic cells". Proc Natl Acad Sci U S A. 93 (20): 11236–41. Bibcode:1996PNAS...9311236J. doi: 10.1073/pnas.93.20.11236 . PMC   1074519 . PMID   8855339.
6. Yu J, Wolda SL, Frazier AL, Florio VA, Martins TJ, Snyder PB, Harris EA, McCaw KN, Farrell CA, Steiner B, Bentley JK, Beavo JA, Ferguson K, Gelinas R (Feb 1998). "Identification and characterisation of a human calmodulin-stimulated phosphodiesterase PDE1B1". Cell Signal. 9 (7): 519–29. doi:10.1016/S0898-6568(97)00046-6. PMID   9419816.
7. "Entrez Gene: PDE1B phosphodiesterase 1B, calmodulin-dependent".

Further reading

• Repaske DR, Swinnen JV, Jin SL, et al. (1992). "A polymerase chain reaction strategy to identify and clone cyclic nucleotide phosphodiesterase cDNAs. Molecular cloning of the cDNA encoding the 63-kDa calmodulin-dependent phosphodiesterase". J. Biol. Chem. 267 (26): 18683–8. doi: 10.1016/S0021-9258(19)37015-2 . PMID   1326532.
• Spence S, Rena G, Sullivan M, et al. (1997). "Receptor-mediated stimulation of lipid signalling pathways in CHO cells elicits the rapid transient induction of the PDE1B isoform of Ca2+/calmodulin-stimulated cAMP phosphodiesterase". Biochem. J. 321 ( Pt 1) (Pt 1): 157–63. doi:10.1042/bj3210157. PMC   1218050 . PMID   9003415.
• Zauli G, Milani D, Mirandola P, et al. (2001). "HIV-1 Tat protein down-regulates CREB transcription factor expression in PC12 neuronal cells through a phosphatidylinositol 3-kinase/AKT/cyclic nucleoside phosphodiesterase pathway". FASEB J. 15 (2): 483–91. doi: 10.1096/fj.00-0354com . PMID   11156964. S2CID   26315564.
• Fidock M, Miller M, Lanfear J (2002). "Isolation and differential tissue distribution of two human cDNAs encoding PDE1 splice variants". Cell. Signal. 14 (1): 53–60. doi:10.1016/S0898-6568(01)00207-8. PMID   11747989.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ballif BA, Villén J, Beausoleil SA, et al. (2005). "Phosphoproteomic analysis of the developing mouse brain". Mol. Cell. Proteomics. 3 (11): 1093–101. doi: 10.1074/mcp.M400085-MCP200 . PMID   15345747.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Bender AT, Ostenson CL, Wang EH, Beavo JA (2005). "Selective up-regulation of PDE1B2 upon monocyte-to-macrophage differentiation". Proc. Natl. Acad. Sci. U.S.A. 102 (2): 497–502. Bibcode:2005PNAS..102..497B. doi: 10.1073/pnas.0408535102 . PMC   544304 . PMID   15625104.
• Bender AT, Beavo JA (2006). "PDE1B2 regulates cGMP and a subset of the phenotypic characteristics acquired upon macrophage differentiation from a monocyte". Proc. Natl. Acad. Sci. U.S.A. 103 (2): 460–5. Bibcode:2006PNAS..103..460B. doi: 10.1073/pnas.0509972102 . PMC   1326187 . PMID   16407168.