Ploidy is the number of complete sets of chromosomes in a cell, and hence the number of possible alleles for autosomal and pseudoautosomal genes. Sets of chromosomes refer to the number of maternal and paternal chromosome copies, respectively, in each homologous chromosome pair, which chromosomes naturally exist as. Somatic cells, tissues, and individual organisms can be described according to the number of sets of chromosomes present : monoploid, diploid, triploid, tetraploid, pentaploid, hexaploid, heptaploid or septaploid, etc. The generic term polyploid is often used to describe cells with three or more sets of chromosomes.
Gossypium is a genus of flowering plants in the tribe Gossypieae of the mallow family, Malvaceae, from which cotton is harvested. It is native to tropical and subtropical regions of the Old and New Worlds. There are about 50 Gossypium species, making it the largest genus in the tribe Gossypieae, and new species continue to be discovered. The name of the genus is derived from the Arabic word goz, which refers to a soft substance.
Durum wheat, also called pasta wheat or macaroni wheat, is a tetraploid species of wheat. It is the second most cultivated species of wheat after common wheat, although it represents only 5% to 8% of global wheat production. It was developed by artificial selection of the domesticated emmer wheat strains formerly grown in Central Europe and the Near East around 7000 BC, which developed a naked, free-threshing form. Like emmer, durum wheat is awned. It is the predominant wheat that grows in the Middle East.
A quantitative trait locus (QTL) is a locus that correlates with variation of a quantitative trait in the phenotype of a population of organisms. QTLs are mapped by identifying which molecular markers correlate with an observed trait. This is often an early step in identifying the actual genes that cause the trait variation.
The triangle of U is a theory about the evolution and relationships among the six most commonly known members of the plant genus Brassica. The theory states that the genomes of three ancestral diploid species of Brassica combined to create three common tetraploid vegetables and oilseed crop species. It has since been confirmed by studies of DNA and proteins.
Phyllody is the abnormal development of floral parts into leafy structures. It is generally caused by phytoplasma or virus infections, though it may also be because of environmental factors that result in an imbalance in plant hormones. Phyllody causes the affected plant to become partially or entirely sterile, as it is unable to produce normal flowers.
Puccinia hordei is a species of rust fungus. A plant pathogen, it can cause leaf rust of barley, also known as brown rust of barley. It was originally found on the dry leaves of Hordeum vulgare in Germany.
Marker assisted selection or marker aided selection (MAS) is an indirect selection process where a trait of interest is selected based on a marker linked to a trait of interest, rather than on the trait itself. This process has been extensively researched and proposed for plant- and animal- breeding.
Soil-borne wheat mosaic virus is a rod-shaped plant pathogen that can cause severe stunting and mosaic in susceptible wheat, barley and rye cultivars. The disease has often been misdiagnosed as a nutritional problem, but this has actually allowed in part for the fortuitous visual selection by breeding programs of resistant genotypes. Soil-borne wheat mosaic virus is part of the genus Furovirus. Members of this genus are characterized by rigid rod-shaped particles and positive sense RNA genomes consisting of two molecules that are packaged into separate particles that code for either replication, mobility, structure or defense against the host. The virus is spread by a fungal-like protist, Polymyxa graminis, whose asexual secondary and sexual primary cycles help the virus spread. The disease produces secondary symptoms from the root cell infection. The disease is a serious contributor to loss in crop yield.
A doubled haploid (DH) is a genotype formed when haploid cells undergo chromosome doubling. Artificial production of doubled haploids is important in plant breeding.
In genetics, association mapping, also known as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage of historic linkage disequilibrium to link phenotypes to genotypes, uncovering genetic associations.
Quantitative trait loci mapping or QTL mapping is the process of identifying genomic regions that potentially contain genes responsible for important economic, health or environmental characters. Mapping QTLs is an important activity that plant breeders and geneticists routinely use to associate potential causal genes with phenotypes of interest. Family-based QTL mapping is a variant of QTL mapping where multiple-families are used.
Molecular breeding is the application of molecular biology tools, often in plant breeding and animal breeding. In the broad sense, molecular breeding can be defined as the use of genetic manipulation performed at the level of DNA to improve traits of interest in plants and animals, and it may also include genetic engineering or gene manipulation, molecular marker-assisted selection, and genomic selection. More often, however, molecular breeding implies molecular marker-assisted breeding (MAB) and is defined as the application of molecular biotechnologies, specifically molecular markers, in combination with linkage maps and genomics, to alter and improve plant or animal traits on the basis of genotypic assays.
High plains disease is a viral disease afflicting wheat and maize. It is caused by the negative-sense ssRNA virus High Plains wheat mosaic emaravirus. Symptoms are similar to Wheat streak mosaic virus, with leaf veins showing yellow flecks and streaks, followed by leaf margin purpling in maize. Depending on the timing of infection, stunting and death occur. Plants can be doubly infected with high plains virus and wheat streak mosaic virus.
High Plains wheat mosaic emaravirus (WMoV), or High Plains virus (HPV) or Maize red stripe virus (MRSV/MRStV) is the causative agent of High plains disease of maize and wheat. It is spread by wheat curl mite, Aceria tosichella, which also transmits Wheat streak mosaic virus. The mite's ability to transmit a number of different viruses to cereal crops make it an economically important agricultural pest. In late June 2017 this virus was first detected in Canada, in Alberta. The Alberta samples were 99% similar to those in the USA. As Wheat streak mosaic virus is already present in Alberta, and coinfection with these two causes even more severe damage, this could cause much higher yield losses.
Fig mosaic emaravirus (FMV) is a segmented, negative sense, single-stranded RNA virus that is determined to be the causal agent of fig mosaic disease (FMD) in fig plants, Ficus carica. It is a member of the genus Emaravirus and order Bunyavirales and is transmitted mainly by the eriophyid mite Aceria ficus. FMV can cause a range of symptoms varying in severity, including leaf chlorosis, deformity, and mosaic or discoloration patterns, as well as premature fruit drop.
Manihot carthaginensis subsp. glaziovii, also known as Manihot glaziovii, the tree cassava or Ceara rubber tree, is a species of deciduous flowering plant in the spurge family, Euphorbiaceae, that is native to eastern Brazil.
Solynta is a Dutch biotechnology company that specializes in hybrid potato breeding. It is headquartered in Wageningen, Gelderland, the Netherlands.
Awais Khan is a Pakistani-American plant geneticist and an associate professor at the College of Agriculture and Life Sciences, Cornell University.
