Type of site | Taxonomic catalogue |
---|---|
Available in | English |
URL | www |
Commercial | No |
Registration | Not required |
Launched | June 2001 |
Current status | Active |
The Catalogue of Life is an online database that provides an index of known species of animals, plants, fungi, and microorganisms. It was created in 2001 as a partnership between the global Species 2000 and the American Integrated Taxonomic Information System. The Catalogue is used by research scientists, citizen scientists, educators, and policy makers. [1] The Catalogue is also used by the Biodiversity Heritage Library, the Barcode of Life Data System, Encyclopedia of Life , and the Global Biodiversity Information Facility. [2] The Catalogue currently compiles data from 165 peer-reviewed taxonomic databases that are maintained by specialist institutions around the world. As of September 2022, [update] the COL Checklist lists 2,067,951 [3] of the world's 2.2m extant species known to taxonomists on the planet at present time.
The Catalogue of Life employs a simple data structure to provide information on synonymy, grouping within a taxonomic hierarchy, common names, distribution and ecological environment. [4] It provides a dynamic edition, [5] which is updated monthly (and in which data can change without tracking of those changes) and an Annual Checklist, [6] which provides a dated, verifiable reference for the usage of names and associated data. Development of the Catalogue of Life was funded through the Species 2000 europa (EuroCat), [7] 4d4Life, [8] i4Life [9] projects in 2003–2013, and later by the Naturalis Biodiversity Center, Leiden, the Netherlands and Species Files group at Illinois Natural History Survey in Champaign-Urbana.
Current people governing the CoL, [10] contributors, [11] and other relevant information which changes over time, are listed on the CoL Web site.
Much of the use of the Catalogue is to provide a backbone taxonomy for other global data portals and biological collections. Through the i4Life project, it has formal partnerships with Global Biodiversity Information Facility, European Nucleotide Archive, Encyclopedia of Life, European Consortium for the Barcode of Life, IUCN Red List, and Life Watch. The public interface includes both search and browse functions as well as offering multi-lingual services. [2]
The Catalogue listed 300,000 species by 2003, 500,000 species by 2005, and over 800,000 species by 2006. [12] As of 2019 [update] , the Catalogue listed 1.9 million extant and extinct species. [13] There are an estimated 14 million mainly unpublished species; however, this number is uncertain as there is a lack of data on the possible number of undescribed insects, nematodes, bacteria, fungi and many others. [14]
In 2015, an expert panel presented a consensus hierarchical classification of life [15] which included some sectors not yet represented in the published Catalogue. In the same year, the Catalogue of Life, Barcode of Life Data System, Biodiversity Heritage Library, Encyclopedia of Life, and the Global Biodiversity Information Facility (GBIF) met to consider building a single shared authoritative nomenclature and taxonomic foundation "Catalogue of Life Plus" that could be used to order and connect biodiversity data, including content not yet in CoL but available via other sources, to serve both the users of the present Catalogue and users of extended taxonomic content (such as GBIF) using a common infrastructure. COL+ will develop a clearinghouse covering scientific names across all life, provide a single taxonomic view, and provide an avenue for feedback from content authorities. [2] The CoL is developing in conjunction with the Global Species List Working Group to avoid replication and work towards an authoritative global list of species.
Royal Botanic Gardens, Kew is a non-departmental public body in the United Kingdom sponsored by the Department for Environment, Food and Rural Affairs. An internationally important botanical research and education institution, it employs 1,100 staff. Its board of trustees is chaired by Dame Amelia Fawcett.
The Integrated Taxonomic Information System (ITIS) is an American partnership of federal agencies designed to provide consistent and reliable information on the taxonomy of biological species. ITIS was originally formed in 1996 as an interagency group within the US federal government, involving several US federal agencies, and has now become an international body, with Canadian and Mexican government agencies participating. The database draws from a large community of taxonomic experts. Primary content staff are housed at the Smithsonian National Museum of Natural History and IT services are provided by a US Geological Survey facility in Denver. The primary focus of ITIS is North American species, but many biological groups exist worldwide and ITIS collaborates with other agencies to increase its global coverage.
The Global Biodiversity Information Facility (GBIF) is an international organisation that focuses on making scientific data on biodiversity available via the Internet using web services. The data are provided by many institutions from around the world; GBIF's information architecture makes these data accessible and searchable through a single portal. Data available through the GBIF portal are primarily distribution data on plants, animals, fungi, and microbes for the world, and scientific names data.
Biodiversity informatics is the application of informatics techniques to biodiversity information, such as taxonomy, biogeography or ecology. It is defined as the application of Information technology technologies to management, algorithmic exploration, analysis and interpretation of primary data regarding life, particularly at the species level organization. Modern computer techniques can yield new ways to view and analyze existing information, as well as predict future situations. Biodiversity informatics is a term that was only coined around 1992 but with rapidly increasing data sets has become useful in numerous studies and applications, such as the construction of taxonomic databases or geographic information systems. Biodiversity informatics contrasts with "bioinformatics", which is often used synonymously with the computerized handling of data in the specialized area of molecular biology.
The World Register of Marine Species (WoRMS) is a taxonomic database that aims to provide an authoritative and comprehensive list of names of marine organisms.
A taxonomic database is a database created to hold information on biological taxa – for example groups of organisms organized by species name or other taxonomic identifier – for efficient data management and information retrieval. Taxonomic databases are routinely used for the automated construction of biological checklists such as floras and faunas, both for print publication and online; to underpin the operation of web-based species information systems; as a part of biological collection management ; as well as providing, in some cases, the taxon management component of broader science or biology information systems. They are also a fundamental contribution to the discipline of biodiversity informatics.
Diachrysia balluca, commonly known as the green-patched looper or hologram moth, is a moth of the family Noctuidae. The species was first described by scientific illustrator Carl Geyer in 1832.
The pygmy brown-toothed shrew is a species of shrew in the order Eulipotyphla. It is distributed in China. C. parva was initially thought to be the same as Chodsigoa lamula, but it was found to be a separate species.
DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that by comparison with a reference library of such DNA sections, an individual sequence can be used to uniquely identify an organism to species, just as a supermarket scanner uses the familiar black stripes of the UPC barcode to identify an item in its stock against its reference database. These "barcodes" are sometimes used in an effort to identify unknown species or parts of an organism, simply to catalog as many taxa as possible, or to compare with traditional taxonomy in an effort to determine species boundaries.
A Global Species Database (GSD) is a digital catalog of organisms often defined around a conservation purpose for the organisms of interest. GSDs attempt to be globally inclusive of species within their inclusion parameters versus local species databases. GSDs have a defined purpose, SPECIESDAB is a GSD for economically valuable fish species, while FishBase focuses on fin fish regardless of their human potential for exploitation. Attempts have been made to create GSDs for extinct species such as trilobites. A GSD can be broad in taxonomic scope, such as AlgaeBase comprehensively including algae and seagrasses from the entire planet, or narrow such as International Legume Database & Information Service, a GSD for members of a single plant family, the Fabaceae.
Stygnomma spiniferum is a species of armoured harvestman in the family Stygnommatidae. It is found in North America.
Costantinella is a genus of anamorphic fungi in the family Morchellaceae and class Pezizomycetes
The Interim Register of Marine and Nonmarine Genera (IRMNG) is a taxonomic database which attempts to cover published genus names for all domains of life from 1758 in zoology up to the present, arranged in a single, internally consistent taxonomic hierarchy, for the benefit of Biodiversity Informatics initiatives plus general users of biodiversity (taxonomic) information. In addition to containing over 490,000 published genus name instances as at March 2020, the database holds over 1.7 million species names, although this component of the data is not maintained in as current or complete state as the genus-level holdings. IRMNG can be queried online for access to the latest version of the dataset and is also made available as periodic snapshots or data dumps for import/upload into other systems as desired.
The Ebbe Nielsen Challenge is an international science competition conducted annually from 2015 onwards by the Global Biodiversity Information Facility (GBIF), with a set of cash prizes that recognize researcher(s)' submissions in creating software or approaches that successfully address a GBIF-issued challenge in the field of biodiversity informatics. It succeeds the Ebbe Nielsen Prize, which was awarded annually by GBIF between 2002 and 2014. The name of the challenge honours the memory of prominent entomologist and biodiversity informatics proponent Ebbe Nielsen, who died of a heart attack in the U.S.A. en route to the 2001 GBIF Governing Board meeting.
Saxifraga consanguinea is a flowering plant species in the genus Saxifraga of the family Saxifragaceae.
Petrocodon is a diverse genus of the family Gesneriaceae found in Southern China. Petrocodon formerly had few species, but recent genetic analysis has refined our understanding of the genus. Calcareoboea, Paralagarosolen, Dolicholoma and Tengia monotypic genera have been transferred to Petrocodon, as well as some Didymocarpus and Lagarosolen species.
Nemopistha hennini is a Neuropteran insect species described by Luisa Eugenia Navas in 1911, which is found in the Congo Basin. N. hennini is part of the genus Nemopistha and the family Nemopteridae. No subspecies are listed in the Catalog of Life.
Rheiformes is an order that contains the family Rheidae (rheas). It is in the infraclass Paleognathae, which contains all ratites. Extant members are found in South America. While the IOC World Bird List and the Clements Checklist categorise Rheiformes as its own order, the BirdLife Data Zone includes rheas, along with ostriches, tinamous, cassowaries, emu, and kiwis, in the order Struthioniformes. Of the two extant species of rheas recognized by the IUCN Red List, as of 2022, Rhea americana is listed as near threatened, while Rhea pennata is listed as least concern. From 2014 to 2022, the IUCN recognised Rhea tarapacensis as a separate species, and listed it as near threatened in its last assessment in 2020; in 2022, it was again recognised as a subspecies of R. pennata.
The little Indochinese field rat is a common long-tailed rodent of the rat genus Rattus, in the family Muridae. It is mostly found in Southeast Asia, specifically concentrated in northern and central Thailand and the Vientiane Plain in northwestern Laos.
{{cite web}}
: CS1 maint: unfit URL (link)