STAMBPL1

STAMBPL1
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2ZNR, 2ZNV
Identifiers
Aliases	STAMBPL1 , ALMalpha, AMSH-FP, AMSH-LP, bA399O19.2, STAM binding protein like 1
External IDs	OMIM: 612352; MGI: 1923880; HomoloGene: 23253; GeneCards: STAMBPL1; OMA:STAMBPL1 - orthologs
Gene location (Human) Chr. Chromosome 10 (human) [1] Band 10q23.31 Start 88,879,734 bp [1] End 88,975,153 bp [1]
Gene location (Mouse) Chr. Chromosome 19 (mouse) [2] Band 19|19 C1 Start 34,169,629 bp [2] End 34,217,733 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in mucosa of ileum endothelial cell Brodmann area 23 mucosa of sigmoid colon middle temporal gyrus primary visual cortex pancreatic epithelial cell cardiac muscle tissue of right atrium stromal cell of endometrium epithelium of nasopharynx Top expressed in spermatid seminiferous tubule thymus granulocyte epithelium of small intestine spermatocyte stria vascularis gastrula tibiofemoral joint visual cortex More reference expression data BioGPS n/a
Gene ontology Molecular function peptidase activity protein binding hydrolase activity metallopeptidase activity metal ion binding Lys63-specific deubiquitinase activity thiol-dependent deubiquitinase Cellular component membrane cytosol endosome Biological process proteolysis protein deubiquitination protein K63-linked deubiquitination Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 57559 76630 Ensembl ENSG00000138134 ENSMUSG00000024776 UniProt Q96FJ0 Q76N33 RefSeq (mRNA) NM_020799 NM_029682 NM_001360716 NM_001360717 NM_001360718 NM_001360719 NM_001360720 RefSeq (protein) NP_065850 NP_083958 NP_001347645 NP_001347646 NP_001347647 NP_001347648 NP_001347649 Location (UCSC) Chr 10: 88.88 – 88.98 Mb Chr 19: 34.17 – 34.22 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

AMSH-like protease is an enzyme that in humans is encoded by the STAMBPL1 gene. ^{[5] [6] [7]}

References

1. GRCh38: Ensembl release 89: ENSG00000138134 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000024776 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Kikuchi K, Ishii N, Asao H, Sugamura K (Jun 2003). "Identification of AMSH-LP containing a Jab1/MPN domain metalloenzyme motif". Biochem Biophys Res Commun. 306 (3): 637–43. doi:10.1016/S0006-291X(03)01009-X. PMID   12810066.
6. Kitajima K, Matsumoto K, Tahara M, Takahashi H, Nakamura T, Nakamura T (Aug 2003). "A newly identified AMSH-family protein is specifically expressed in haploid stages of testicular germ cells". Biochem Biophys Res Commun. 309 (1): 135–42. doi:10.1016/S0006-291X(03)01550-X. PMID   12943674.
7. "Entrez Gene: STAMBPL1 STAM binding protein-like 1".

Further reading

• Nagase T, Kikuno R, Ishikawa KI, et al. (2000). "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (1): 65–73. doi: 10.1093/dnares/7.1.65 . PMID   10718198.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Ibarrola N, Kratchmarova I, Nakajima D, et al. (2004). "Cloning of a novel signaling molecule, AMSH-2, that potentiates transforming growth factor beta signaling". BMC Cell Biol. 5: 2. doi: 10.1186/1471-2121-5-2 . PMC   385422 . PMID   14728725.
• Li H, Seth A (2004). "An RNF11: Smurf2 complex mediates ubiquitination of the AMSH protein". Oncogene. 23 (10): 1801–8. doi:10.1038/sj.onc.1207319. PMID   14755250. S2CID   37253372.
• Deloukas P, Earthrowl ME, Grafham DV, et al. (2004). "The DNA sequence and comparative analysis of human chromosome 10". Nature. 429 (6990): 375–81. Bibcode:2004Natur.429..375D. doi: 10.1038/nature02462 . PMID   15164054.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID   16189514. S2CID   4427026.
• Nakamura M, Tanaka N, Kitamura N, Komada M (2006). "Clathrin anchors deubiquitinating enzymes, AMSH and AMSH-like protein, on early endosomes". Genes Cells. 11 (6): 593–606. doi:10.1111/j.1365-2443.2006.00963.x. PMID   16716190. S2CID   30077507.
• Reyes-Ibarra AP, García-Regalado A, Ramírez-Rangel I, et al. (2007). "Calcium-sensing receptor endocytosis links extracellular calcium signaling to parathyroid hormone-related peptide secretion via a Rab11a-dependent and AMSH-sensitive mechanism". Mol. Endocrinol. 21 (6): 1394–407. doi: 10.1210/me.2006-0523 . PMID   17426287.