Tej P. Singh

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Tej Pal Singh
TPSingh.jpg
Born1944 (1944) (age 80)
Nationality Indian
Alma mater Indian Institute of Science, Bangalore
Known forProtein Structure Determination, Peptide Design
Drug Design
Children Vineeta Singh (daughter)
AwardsGoyal Prize 2010 for Life Sciences
Distinguished Biotechnology Research Professor (DBT) (2009)
Distinguished Biotechnologist (DBT) (2006)
GN Ramachandran Gold Medal CSIR)
Scientific career
FieldsRational structure based Drug Design
Institutions All India Institute of Medical Sciences

Tej Pal Singh (born 1944) is an Indian biophysicist known for his work in the fields of rational structure-based drug design, structural biology of proteins and X-ray crystallography. [1] He has played an active role in the development of drug design in the fields of antibacterial therapeutics, [2] [3] [4] [5] [6] tuberculosis, [7] [6] [8] inflammation, [9] [10] cancer [11] [12] and gastropathy. [10] [13]

Contents

He is first Indian to receive all the six Ramachandran awards of the country. [14] He is a fellow of six academies, namely, the Third World Academy of Sciences, Indian National Science Academy, National Academy of Sciences, Indian Academy of Sciences, Alexander von Humboldt Foundation and Biotech Research Society of India. [15]

Education

Tej obtained his master's degree in science from the University of Allahabad. He started his research career in 1971 as a graduate student at the Indian Institute of Science, Bangalore. He obtained his Ph.D. degree in the mid-1970s working on the crystal structure determinations and design of anti-inflammatory analgesics for new drug discovery. . Before going for his bachelor's degree in Science in Allahabad University, Tej Pal Singh has studied in his neighbourhood village school i.e. Kisan Intermediate College Deorhi-Wajidpur (District-Amroha UP) and later Government Intermediate College (GIC) in Amroha (UP).

Professional career

Soon after obtaining his Ph.D. degree, Tej worked for a year as a lecturer at the University of Indore. He then spent more than two years (1978–1980) as an Alexander von Humboldt / Max-Planck, post doctoral fellow in the German laboratory of Professor Robert Huber, who later received the Nobel Prize. After his return to India he worked as a reader at Sardar Patel University (1980–83) and an additional professor (1984–85) in the Department of Biophysics at the All India Institute of Medical Sciences, New Delhi. He was appointed professor and head of the department in 1986

Contributions in protein structural biology

The three-dimensional structures of various proteins including lactoperoxidase, [16] peptidoglycan recognition protein, lactoferrin [17] [18] [19] from several species, ribosome inactivating proteins, [20] bifunctional inhibitor proteins from plant seeds and various serine proteases and their inhibitors have been determined by his group. The elaborate structural studies of proteins from several important systems as potential drug targets such as phospholipase A2, cyclooxygenase, lipoxygenase, endothelin receptor, endothelin converting enzyme, breast cancer regression proteins and matrix metanosomal proteins as well as their complexes with natural and designed synthetic ligands have been carried out. He had developed the rules of peptide design with alpha, beta – dehydro – amino acids through extensive studies using syntheses, and X-ray and NMR structure determinations. These design rules are being exploited for making specific peptides to act as tight inhibitors of target enzymes and potent antagonists of target receptors for eventually leading to useful therapeutic agents.

He initiated a new programme on Clinical Proteomics at the All India Institute of Medical Sciences in which it is intended to characterize all the proteins that are expressed during various patho/physiological conditions. The newly identified proteins will either be useful as biomarkers or they may be associated with the progression of diseases making them important targets for drug design.

Awards and honors

Tej is a fellow of the Third World Academy of Sciences, Indian National Science Academy, National Academy of Sciences Indian Academy of Sciences, Alexander von Humboldt Foundation and Biotech Research Society of India. He has won the Goyal Prize for Life Sciences, Distinguished Biotechnology Research Professor (DBT) (2009), GN Ramachandran Gold Medal for excellence in Science and Technology (CSIR) (2006), Distinguished Biotechnologist (DBT), 2006, JC Bose Memorial Award (2005), Alexander von Humboldt Fellow (1977), Canadian development Agency Award (1999)

Related Research Articles

Peptidoglycan or murein is a unique large macromolecule, a polysaccharide, consisting of sugars and amino acids that forms a mesh-like peptidoglycan layer (sacculus) that surrounds the bacterial cytoplasmic membrane. The sugar component consists of alternating residues of β-(1,4) linked N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM). Attached to the N-acetylmuramic acid is an oligopeptide chain made of three to five amino acids. The peptide chain can be cross-linked to the peptide chain of another strand forming the 3D mesh-like layer. Peptidoglycan serves a structural role in the bacterial cell wall, giving structural strength, as well as counteracting the osmotic pressure of the cytoplasm. This repetitive linking results in a dense peptidoglycan layer which is critical for maintaining cell form and withstanding high osmotic pressures, and it is regularly replaced by peptidoglycan production. Peptidoglycan hydrolysis and synthesis are two processes that must occur in order for cells to grow and multiply, a technique carried out in three stages: clipping of current material, insertion of new material, and re-crosslinking of existing material to new material.

<span class="mw-page-title-main">Lysozyme</span> Antimicrobial enzyme produced by animals

Lysozyme is an antimicrobial enzyme produced by animals that forms part of the innate immune system. It is a glycoside hydrolase that catalyzes the following process:

<span class="mw-page-title-main">Lactoferrin</span> Mammalian protein found in Homo sapiens

Lactoferrin (LF), also known as lactotransferrin (LTF), is a multifunctional protein of the transferrin family. Lactoferrin is a globular glycoprotein with a molecular mass of about 80 kDa that is widely represented in various secretory fluids, such as milk, saliva, tears, and nasal secretions. Lactoferrin is also present in secondary granules of PMNs and is secreted by some acinar cells. Lactoferrin can be purified from milk or produced recombinantly. Human colostrum has the highest concentration, followed by human milk, then cow milk (150 mg/L).

<span class="mw-page-title-main">Penicillin-binding proteins</span> Class of proteins

Penicillin-binding proteins (PBPs) are a group of proteins that are characterized by their affinity for and binding of penicillin. They are a normal constituent of many bacteria; the name just reflects the way by which the protein was discovered. All β-lactam antibiotics bind to PBPs, which are essential for bacterial cell wall synthesis. PBPs are members of a subgroup of enzymes called transpeptidases. Specifically, PBPs are DD-transpeptidases.

<i>Tinospora cordifolia</i> Species of flowering plant

Tinospora cordifolia is a herbaceous vine of the family Menispermaceae indigenous to tropical regions of the Indian subcontinent. It has been used in Ayurveda to treat various disorders.

<span class="mw-page-title-main">XPO5</span>

Exportin-5 (XPO5) is a protein that, in humans, is encoded by the XPO5 gene. In eukaryotic cells, the primary purpose of XPO5 is to export pre-microRNA out of the nucleus and into the cytoplasm, for further processing by the Dicer enzyme. Once in the cytoplasm, the microRNA can act as a gene silencer by regulating translation of mRNA. Although XPO5 is primarily involved in the transport of pre-miRNA, it has also been reported to transport tRNA.

<span class="mw-page-title-main">Peptidoglycan recognition protein 2</span> Protein-coding gene in the species Homo sapiens

Peptidoglycan recognition protein 2(PGLYRP2) is an enzyme, N-acetylmuramoyl-L-alanine amidase (NAMLAA), that hydrolyzes bacterial cell wall peptidoglycan and is encoded by the PGLYRP2 gene.

<span class="mw-page-title-main">Peptidoglycan recognition protein 1</span> Protein-coding gene in the species Homo sapiens

Peptidoglycan recognition protein 1, PGLYRP1, also known as TAG7, is an antibacterial and pro-inflammatory innate immunity protein that in humans is encoded by the PGLYRP1 gene.

<span class="mw-page-title-main">Lactoperoxidase</span> Mammalian protein found in Homo sapiens

Lactoperoxidase is a peroxidase enzyme secreted from mammary, salivary and other mucosal glands including the lungs, bronchii and nose that functions as a natural and the first line of defense against bacteria and viruses. Lactoperoxidase is a member of the heme peroxidase family of enzymes. In humans, lactoperoxidase is encoded by the LPO gene.

Pathogenesis-related (PR) proteins are proteins produced in plants in the event of a pathogen attack. They are induced as part of systemic acquired resistance. Infections activate genes that produce PR proteins. Some of these proteins are antimicrobial, attacking molecules in the cell wall of a bacterium or fungus. Others may function as signals that spread “news” of the infection to nearby cells. Infections also stimulate the cross-linking of molecules in the cell wall and the deposition of lignin, responses that set up a local barricade that slows spread of the pathogen to other parts of the plant.

<span class="mw-page-title-main">Peptidoglycan recognition protein</span> Protein family

Peptidoglycan recognition proteins (PGRPs) are a group of highly conserved pattern recognition receptors with at least one peptidoglycan recognition domain capable of recognizing the peptidoglycan component of the cell wall of bacteria. They are present in insects, mollusks, echinoderms and chordates. The mechanism of action of PGRPs varies between taxa. In insects, PGRPs kill bacteria indirectly by activating one of four unique effector pathways: prophenoloxidase cascade, Toll pathway, IMD pathway, and induction of phagocytosis. In mammals, PGRPs either kill bacteria directly by interacting with their cell wall or outer membrane, or hydrolyze peptidoglycan. They also modulate inflammation and microbiome and interact with host receptors.

Alice Vrielink is a structural biologist and Professor of Structural Biology in the School of Molecular Sciences at the University of Western Australia. She is known for her work determining the structures of macromolecules such as enzymes and nucleic acids.

Vinod Bhakuni (1962–2011) was an Indian molecular biophysicist and the head of the Molecular and Structural Biology Division of the Central Drug Research Institute (CDRI). He was the founder of the Protein Chemistry laboratory of CDRI and was known for his contributions to the study of protein folding. A recipient of the National Bioscience Award for Career Development, he was an elected fellow of the Indian Academy of Sciences, Indian National Science Academy and the National Academy of Sciences, India. The Council of Scientific and Industrial Research, the apex agency of the Government of India for scientific research, awarded him the Shanti Swarup Bhatnagar Prize for Science and Technology, one of the highest Indian science awards, in 2006, for his contributions to biological sciences.

<span class="mw-page-title-main">Ravindra Kumar Sinha (physicist)</span> Indian physicist and administrator

Prof. R K Sinha is the Vice Chancellor of Gautam Buddha University, Greater Noida, Gautam Budh Nagar Under UP Government. He was the director of the CSIR-Central Scientific Instruments Organisation (CSIR-CSIO) Sector-30C, Chandigarh-160 030, India. He has been a Professor - Applied Physics, Dean-Academic [UG] & Chief Coordinator: TIFAC-Center of Relevance and Excellence in Fiber Optics and Optical Communication, Mission REACH Program, Technology Vision-2020, Govt. of India Delhi Technological University Bawana Road, Delhi-110042, India.

<span class="mw-page-title-main">Deepak T. Nair</span>

Deepak Thankappan Nair is an Indian Structural Biologist and a scientist at Regional Centre for Biotechnology. He is known for his studies on DNA and RNA polymerases. Deepak was a Ramanujan fellow of the Science and Engineering Research Board (2008–2013) and a recipient of the National BioScience Award for Career Development. The Council of Scientific and Industrial Research, the apex agency of the Government of India for scientific research, awarded him the Shanti Swarup Bhatnagar Prize for Science and Technology, one of the highest Indian science awards, for his contributions to biological sciences in 2017. He was inducted as a fellow of the Indian National Science Academy in December, 2022.

<span class="mw-page-title-main">Sujata Sharma</span> Indian biophysicist

Sujata Sharma is an Indian structural biologist, biophysicist, writer and a professor at the Department of Biophysics of the All India Institute of Medical Sciences, Delhi. She is known for her studies in the fields of protein structure, drug design and drug resistance of bacteria. Her studies have been documented by way of a number of articles and ResearchGate, an online repository of scientific articles has listed 167 of them. She is also the author of the books, "Warriors in White", an autobiographical account of some COVID-19 Warriors at All India Institute of Medical Sciences, Delhi and other leading hospitals of India, including Prof Randeep Guleria, using a combination of modern medicine, astronomy and Vedic astrology, "The Secret of the Red Crystals", an autobiographical account of her days in AIIMS Delhi. and "A Dragonfly's purpose", which is an autobiographical account of her recovery from an autoimmune disease, Guillain Barre Syndrome. The Department of Biotechnology of the Government of India awarded her the National Bioscience Award for Career Development, one of the highest Indian science awards, for her contributions to biosciences, in 2011. She is also a recipient of the Woman Scientist Award of the Biotech Research Society of India and the National Young Woman Bioscientist Award of the Department of Biotechnology which she received in 2006 and 2007 respectively. In 2020, she was awarded the Kalpana Chawla Excellence award, for her contributions in science. This award is instituted in the memory of the first Indian woman astronaut, Kalpana Chawla to go on space missions.

Professor Pravindra Kumar is an Indian biophysicist, bioinformatician, biochemist and Professor & Head Department of Biosciences and Bioengineering, Indian Institute Of Technology–Roorkee (IIT–Roorkee) India. He is known for his work on protein-protein interactions, protein engineering and structure-based drug design. Prof. Pravindra Kumar's primary research interest lies in studying Bacterial enzymes and pathways involved in the degradation of toxic aromatic compounds, such as PCBs, dibenzofuran, chlorodibenzofurans, DDT, dyes, and plastics/plasticizers. He focuses particularly on oxidoreductases enzymes due to their unique ability to catalyze challenging reactions, with a special emphasis on understanding their catalytic mechanisms and structural basis for guiding protein engineering. One notable achievement of his research group is the successful engineering of dioxygenases capable of metabolizing various toxic compounds, including those found in plastics.

<span class="mw-page-title-main">Peptidoglycan recognition protein 3</span>

Peptidoglycan recognition protein 3 is an antibacterial and anti-inflammatory innate immunity protein that in humans is encoded by the PGLYRP3 gene.

<span class="mw-page-title-main">Peptidoglycan recognition protein 4</span>

Peptidoglycan recognition protein 4 is an antibacterial and anti-inflammatory innate immunity protein that in humans is encoded by the PGLYRP4 gene.

<span class="mw-page-title-main">Roman Dziarski</span> American scientist (born 1949)

Roman Dziarski is a Polish-born American immunologist and microbiologist. He is best known for his research on innate immunity and bacterial peptidoglycan, for discovering the family of human peptidoglycan recognition proteins, which comprises PGLYRP1, PGLYRP2, PGLYRP3, and PGLYRP4, and for defining the functions of these proteins.

References

  1. "On ResearchGate". 29 January 2018. Retrieved 29 January 2018.
  2. Sharma, Pradeep; Dube, Divya; Sinha, Mau; Yadav, Savita; Kaur, Punit; Sharma, Sujata; Singh, Tej P. (1 January 2013). "Structural insights into the dual strategy of recognition by peptidoglycan recognition protein, PGRP-S: structure of the ternary complex of PGRP-S with lipopolysaccharide and stearic acid". PLOS ONE. 8 (1): e53756. Bibcode:2013PLoSO...853756S. doi: 10.1371/journal.pone.0053756 . ISSN   1932-6203. PMC   3541179 . PMID   23326499.
  3. Singh, Amit Kumar; Singh, Nagendra; Sharma, Sujata; Singh, S. Baskar; Kaur, Punit; Bhushan, A.; Srinivasan, A.; Singh, Tej P. (29 February 2008). "Crystal structure of lactoperoxidase at 2.4 A resolution". Journal of Molecular Biology. 376 (4): 1060–1075. doi:10.1016/j.jmb.2007.12.012. ISSN   1089-8638. PMID   18191143.
  4. Rastogi, Nilisha; Nagpal, Nitish; Alam, Hammad; Pandey, Sadanand; Gautam, Lovely; Sinha, Mau; Shin, Kouichirou; Manzoor, Nikhat; Virdi, Jugsharan S. (1 January 2014). "Preparation and antimicrobial action of three tryptic digested functional molecules of bovine lactoferrin". PLOS ONE. 9 (3): e90011. Bibcode:2014PLoSO...990011R. doi: 10.1371/journal.pone.0090011 . ISSN   1932-6203. PMC   3940724 . PMID   24595088.
  5. Rastogi, Nilisha; Singh, Avinash; Pandey, Sada Nand; Sinha, Mau; Bhushan, Asha; Kaur, Punit; Sharma, Sujata; Singh, Tej P. (1 June 2014). "Structure of the iron-free true C-terminal half of bovine lactoferrin produced by tryptic digestion and its functional significance in the gut". The FEBS Journal. 281 (12): 2871–2882. doi: 10.1111/febs.12827 . ISSN   1742-4658. PMID   24798798. S2CID   24534041.
  6. 1 2 Singh, Avinash; Gautam, Lovely; Sinha, Mau; Bhushan, Asha; Kaur, Punit; Sharma, Sujata; Singh, T. P. (1 January 2014). "Crystal structure of peptidyl-tRNA hydrolase from a Gram-positive bacterium, Streptococcus pyogenes at 2.19 Å resolution shows the closed structure of the substrate-binding cleft". FEBS Open Bio. 4: 915–922. doi:10.1016/j.fob.2014.10.010. ISSN   2211-5463. PMC   4226762 . PMID   25389518.
  7. Sharma, Pradeep; Yamini, Shavait; Dube, Divya; Singh, Amar; Mal, Gorakh; Pandey, Nisha; Sinha, Mau; Singh, Abhay Kumar; Dey, Sharmistha (1 January 2013). "Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site". Archives of Biochemistry and Biophysics. 529 (1): 1–10. doi:10.1016/j.abb.2012.11.001. ISSN   1096-0384. PMID   23149273.
  8. Singh, Avinash; Kumar, Ashok; Gautam, Lovely; Sharma, Pradeep; Sinha, Mau; Bhushan, Asha; Kaur, Punit; Sharma, Sujata; Arora, Ashish (1 November 2014). "Structural and binding studies of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa provide a platform for the structure-based inhibitor design against peptidyl-tRNA hydrolase". The Biochemical Journal. 463 (3): 329–337. doi:10.1042/BJ20140631. ISSN   1470-8728. PMID   25101795.
  9. Shukla, Prakash Kumar; Gautam, Lovely; Sinha, Mau; Kaur, Punit; Sharma, Sujata; Singh, Tej P. (1 April 2015). "Structures and binding studies of the complexes of phospholipase A2 with five inhibitors". Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics. 1854 (4): 269–277. doi:10.1016/j.bbapap.2014.12.017. ISSN   0006-3002. PMID   25541253.
  10. 1 2 Sharma, Pradeep; Dube, Divya; Singh, Amar; Mishra, Biswajit; Singh, Nagendra; Sinha, Mau; Dey, Sharmistha; Kaur, Punit; Mitra, Dipendra K. (6 May 2011). "Structural basis of recognition of pathogen-associated molecular patterns and inhibition of proinflammatory cytokines by camel peptidoglycan recognition protein". The Journal of Biological Chemistry. 286 (18): 16208–16217. doi: 10.1074/jbc.M111.228163 . ISSN   1083-351X. PMC   3091228 . PMID   21454594.
  11. Bilgrami, Sameeta; Yadav, Savita; Kaur, Punit; Sharma, Sujata; Perbandt, Markus; Betzel, Christian; Singh, Tej P. (23 August 2005). "Crystal structure of the disintegrin heterodimer from saw-scaled viper (Echis carinatus) at 1.9 A resolution". Biochemistry. 44 (33): 11058–11066. doi:10.1021/bi050849y. ISSN   0006-2960. PMID   16101289.
  12. Mohanty, Ashok K.; Singh, Garima; Paramasivam, Murugan; Saravanan, Kolandaivelu; Jabeen, Talat; Sharma, Sujata; Yadav, Savita; Kaur, Punit; Kumar, Pravindra (18 April 2003). "Crystal structure of a novel regulatory 40-kDa mammary gland protein (MGP-40) secreted during involution". The Journal of Biological Chemistry. 278 (16): 14451–14460. doi: 10.1074/jbc.M208967200 . ISSN   0021-9258. PMID   12529329.
  13. Mir, Rafia; Singh, Nagendra; Vikram, Gopalakrishnapillai; Sinha, Mau; Bhushan, Asha; Kaur, Punit; Srinivasan, Alagiri; Sharma, Sujata; Singh, Tej P. (15 August 2010). "Structural and binding studies of C-terminal half (C-lobe) of lactoferrin protein with COX-2-specific non-steroidal anti-inflammatory drugs (NSAIDs)". Archives of Biochemistry and Biophysics. 500 (2): 196–202. doi:10.1016/j.abb.2010.05.026. ISSN   1096-0384. PMID   20515646.
  14. "Prof T P Singh became the first Indian to receive all Ramachandran Awards". biotechexpressmag.com. 19 March 2020. Archived from the original on 6 May 2022. Retrieved 6 May 2022.
  15. "BRSI". www.brsi.in.
  16. Singh, A..; Singh, N.; Sharma, S.; Singh, S.B.; Kaur, P.; Bhushan, A.; Srinivasan, A.; Singh, T.P. (14 December 2007). "Crystal structures of lactoperoxidase at 2.4 A resolution". Journal of Molecular Biology. 376 (4): 1060–1075. doi:10.1016/j.jmb.2007.12.012. PMID   18191143.
  17. Sharma, S.; Jasti, J.; Kumar, J.; Mohanty, A.K.; Singh, T.P. (8 August 2003). "Crystal structure of a proteolytically generated functional monoferric C-lobe of bovine lactoferrin at 1.9A resolution". Journal of Molecular Biology. 331 (2): 485–96. doi:10.1016/s0022-2836(03)00717-4. PMID   12888354.
  18. Khan, J.A.; Kumar, P.; Paramasivam, M.; Yadav, R.S.; Sahani, M.S.; Sharma, S.; Srinivasan, A.; Singh, T.P. (8 June 2001). "Camel lactoferrin, a transferrin-cum-lactoferrin: crystal structure of camel apolactoferrin at 2.6 A resolution and structural basis of its dual role". Journal of Molecular Biology. 309 (3): 751–761. doi: 10.1006/jmbi.2001.4692 . PMID   11397094.
  19. Mir, R.; Singh, N.; Vikram, G.; Kumar, R.P.; Sinha, M.; Bhushan, A.; Kaur, P.; Srinivasan, A.; Sharma, S.; Singh, T.P. (16 December 2009). "The structural basis for the prevention of nonsteroidal antiinflammatory drug-induced gastrointestinal tract damage by the C-lobe of bovine colostrum lactoferrin". Biophysical Journal. 97 (12): 3178–3186. Bibcode:2009BpJ....97.3178M. doi:10.1016/j.bpj.2009.09.030. PMC   2793366 . PMID   20006955.
  20. Kushwaha, G.S.; Pandey, N.; Sinha, M.; Singh, S.B.; Kaur, P.; Sharma, S.; Singh, T.P. (April 2012). "Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states". Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics. 1824 (4): 679–91. doi:10.1016/j.bbapap.2012.02.005. PMID   22361570.