Umatilla virus

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Umatilla virus
Virus classification Red Pencil Icon.png
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Duplornaviricota
Class: Resentoviricetes
Order: Reovirales
Family: Reoviridae
Genus: Orbivirus
Species:
Umatilla virus

Umatilla virus(UMAV) is a dsRNA virus in the family Reoviridae , subfamily Sedoreovirinae , and the genus Orbivirus . This arbovirus was first isolated in 1969 in Umatilla County, Oregon in a group of Culex pipiens mosquitoes. [1] The viral host is the Passer domesticus bird with the vectors being Culex mosquitoes. [2]

Contents

Virus structure

According to the Baltimore classification, Reoviridae are in Group III due to their dsRNA genome. This family of viruses have a linear and segmented genomic arrangement and they lack a lipid envelope. Opposed to having a lipid envelope, these viruses pack their genome into a multi-layered capsid; the outer capsid being T=13 and the inner T=2. The family is divided into two subfamilies and UMAV belongs to Sedoreovirinae. This subfamily lacks turrets and therefore has a smooth surface. [2]

UMAV is in the genus Orbivirus , which was originally named after its ring shape. The Umatilla virus genome is broken into ten segments with one packaged per virion. The ten segmented genome encodes for 7 major structural proteins and 3 major non-structural. [2]

The UMAV genome is 19,402 bp long, with 5.695% of the genome being non-coding. With UMAV being in the family Reoviridae, it is a non-enveloped virus, but the core is around 30 nm in diameter. The ten segments of this linear dsRNA in the virus mostly code for a single viral protein. [2]

Replication

Along with other viruses in the Reoviridae family, Umatilla virus replication occurs in the cytoplasm. This virus comes with some of its own replication proteins. Entrance into the host cell occurs through cell receptors endocytosis. This process is due to the interaction with sialic acid on the host. [3] The outer capsid is removed as the virus is entering the host via endocytosis. So that the dsRNA never comes in direct contact with the cytoplasm, early replication occurs in the viral core. Both replication and assembly occur in the cytoplasm of the host cell. Host ribosomes are used to translate the viral RNA into mRNA. Virions self-assemble in they host cell cytoplasm and then exit by budding following host cell death. [3]

Transmission

This virus is transmitted by Culex mosquitoes and is found in Passer domesticus birds. [2]

Related Research Articles

<i>Reoviridae</i> Family of viruses

Reoviridae is a family of double-stranded RNA viruses. Member viruses have a wide host range, including vertebrates, invertebrates, plants, protists and fungi. They lack lipid envelopes and package their segmented genome within multi-layered capsids. Lack of a lipid envelope has allowed three-dimensional structures of these large complex viruses to be obtained, revealing a structural and likely evolutionary relationship to the cystovirus family of bacteriophage. There are currently 97 species in this family, divided among 15 genera in two subfamilies. Reoviruses can affect the gastrointestinal system and respiratory tract. The name "reo-" is an acronym for "respiratory enteric orphan" viruses. The term "orphan virus" refers to the fact that some of these viruses have been observed not associated with any known disease. Even though viruses in the family Reoviridae have more recently been identified with various diseases, the original name is still used.

<i>Rubella virus</i> Species of virus

Rubella virus (RuV) is the pathogenic agent of the disease rubella, and is the main cause of congenital rubella syndrome when infection occurs during the first weeks of pregnancy.

Viral replication

Viral replication is the formation of biological viruses during the infection process in the target host cells. Viruses must first get into the cell before viral replication can occur. Through the generation of abundant copies of its genome and packaging these copies, the virus continues infecting new hosts. Replication between viruses is greatly varied and depends on the type of genes involved in them. Most DNA viruses assemble in the nucleus while most RNA viruses develop solely in cytoplasm.

<i>Orbivirus</i> Genus of viruses

Orbivirus is a genus of double-stranded RNA viruses in the family Reoviridae and subfamily Sedoreovirinae. Unlike other reoviruses, orbiviruses are arboviruses. They can infect and replicate within a wide range of arthropod and vertebrate hosts. Orbiviruses are named after their characteristic doughnut-shaped capsomers.

<i>Cypovirus</i> Genus of viruses

Cypovirus, short for cytoplasmic polyhedrosis virus, is a genus of double-stranded RNA viruses in the family Reoviridae and subfamily Spinareovirinae. Cypoviruses have only been isolated from insects. Diseases associated with this genus include: larvae chronic disease. There are currently 16 species in this genus including the type species Cypovirus 1.

<i>Fijivirus</i> Genus of viruses

Fijivirus is a genus of double-stranded RNA viruses in the family Reoviridae and subfamily Spinareovirinae. Plants serve as natural hosts. Diseases associated with this genus include: galls (tumours) in infected plants and Fiji disease, with severe stunting, deformation and death. The group name derives from Fiji island the place where the first virus was isolated. There are currently nine species in this genus including the type species Fiji disease virus.

Double-stranded RNA viruses Type of virus according to Baltimore classification

Double-stranded RNA viruses are a polyphyletic group of viruses that have double-stranded genomes made of ribonucleic acid. The double-stranded genome is used to transcribe a positive-strand RNA by the viral RNA-dependent RNA polymerase (RdRp). The positive-strand RNA may be used as messenger RNA (mRNA) which can be translated into viral proteins by the host cell's ribosomes. The positive-strand RNA can also be replicated by the RdRp to create a new double-stranded viral genome.

<i>Phytoreovirus</i> Genus of viruses

Phytoreovirus is a genus of viruses, in the family Reoviridae, in the subfamily Sedoreovirinae. They are non-turreted reoviruses that are major agricultural pathogens, particularly in Asia. Oryza sativa for RDV and RGDV, dicotyledonous for WTV, and leafhoppers serve as natural hosts. There are currently three species in this genus including the type species Wound tumor virus. Diseases associated with this genus include: WTV: galls (tumor). RDV: dwarf disease of rice. RGDV: dwarfing, stunting, and galls.

Entomopoxvirinae is a subfamily of viruses, in the family Poxviridae. Insects, human, vertebrates, and arthropods serve as natural hosts. There are currently 31 species in this subfamily, divided among 4 genera with one species unassigned to a genus. Diseases associated with this subfamily include: impairment of motility and development.

<i>Seadornavirus</i> Genus of viruses

Seadornavirus is a genus of viruses, in the family Reoviridae, in the subfamily Sedoreovirinae. Human, cattle, pig, and mosquitoes serve as natural hosts. There are three species of viruses in this genus: type species: Banna virus (BAV), Kadipiro virus and Liao ning virus. Each of these viruses has been isolated from Aedes, Anopheles and Culex mosquito populations, but only BAV has been shown to cause infection in humans, in which the symptoms are similar to Japanese encephalitis—fever, malaise and encephalitis. The word seadornavirus is an portmanteau, meaning Southeast Asian dodeca RNA virus.

<i>Sedoreovirinae</i> Subfamily of viruses

Sedoreovirinae is a subfamily of the Reoviridae family of viruses. Viruses in this subfamily are distinguished by the absence of a turreted protein on the inner capsid to produce a smooth surface.

Kadipiro virus (KDV) is a member of the virus family Reoviridae. It is an arbovirus and has been isolated from Culex, Anopheles, Armigeres, and Aedes mosquitoes in Indonesia and China. Other members of the genus Seadornavirus have been linked to viral encephalitis.

Cardoreovirus is a genus of double-stranded RNA viruses in the family Reoviridae and subfamily Sedoreovirinae. Crabs serve as natural hosts. There is currently only one species in this genus: the type species Eriocheir sinensis reovirus. Diseases associated with this genus include: trembling disease. The name derives from Latin words "carcinus" which means crab and "doeca" which means twelve in reference to the number genome segments.

<i>Dinovernavirus</i> Genus of viruses

Dinovernavirus is a genus of double-stranded RNA viruses in the family Reoviridae and subfamily Spinareovirinae. Member viruses replicate in a variety of mosquito cell lines. The name is an abbreviation for double-stranded, insect, novem, rna virus. There is one species in the genus: the type species Aedes pseudoscutellaris reovirus.

Mimoreovirus is a genus of viruses, in the family Reoviridae, in the subfamily Sedoreovirinae. The only isolate infects the marine photosynthetic protist Micromonas pusilla, a prasinophyte. There is currently only one species in this genus: the type species Micromonas pusilla reovirus.

<i>Nodamura virus</i> Species of virus

Nodamura virus (NoV) is a member of the family Nodaviridae, which was originally isolated from mosquitoes in Japan near the village of Nodamura in 1956. Other members of Nodaviridae are flock house virus (FHV) and black beetle virus (BBV). NoV has been found to multiply in several insect and tick species; however, these infected individuals seem to be asymptomatic. Nodamura virus is the only member of the genus Alphanodavirus that can infect insects, fish, and mammals.

Entebbe bat virus is an infectious disease caused by a Flavivirus that is closely related to yellow fever.

Mammalian orthoreovirus (MRV) is a double stranded RNA virus. It is a part of the family Reoviridae, as well as the subfamily Spinareovirinae. As seen in the name, the Mammalian Ortheoreovirus infects numerous mammalian species and vertebrates which serve as natural hosts. Some diseases that occur as a result of this virus or are associated with this virus include mild upper respiratory illness, and gastrointestinal illness. Examples of these are: upper respiratory tract syndromes, gastroenteritis, biliary atresia, obstructive hydrocephalus, jaundice, alopecia, conjunctivitis, and ‘oily hair’ associated with steatorrhea.

<i>Sepik virus</i> Mosquito transmitted virus endemic to Papua New Guinea

Sepik virus (SEPV) is an arthropod-borne virus (arbovirus) of the genus Flavivirus and family Flaviviridae. Flaviviridae is one of the most well characterized viral families, as it contains many well-known viruses that cause diseases that have become very prevalent in the world, like Chikungunya virus and Dengue virus. The genus Flavivirus is one of the largest viral genera and encompasses over 50 viral species, including tick and mosquito borne viruses like Yellow fever virus and West Nile virus. Sepik virus is much less well known and has not been as well-classified as other viruses because it has not been known of for very long. Sepik virus was first isolated in 1966 from the mosquito Mansoniaseptempunctata, and it derives its name from the Sepik River area in Papua New Guinea, where it was first found. The geographic range of Sepik virus is limited to Papua New Guinea, due to its isolation.

Rio Negro virus is an alphavirus that was first isolated in Argentina in 1980. The virus was first called Ag80-663 but was renamed to Rio Negro virus in 2005. The virus is a member of the Venezuelan equine encephalitis complex (VEEC), which are a group of alphaviruses in the Americas that have the potential to emerge and cause disease. Closely related viruses include Mucambo virus and Everglades virus.

References

  1. "ArboCat Virus: Umatilla (UMAV)". wwwn.cdc.gov. Retrieved 2017-11-02.
  2. 1 2 3 4 5 Belaganahalli MN, Maan S, Maan NS, Tesh R, Attoui H, Mertens PP (2011). "Umatilla virus genome sequencing and phylogenetic analysis: identification of stretch lagoon orbivirus as a new member of the Umatilla virus species". PLOS One. 6 (8): e23605. Bibcode:2011PLoSO...623605B. doi:10.1371/journal.pone.0023605. PMC   3163642 . PMID   21897849.
  3. 1 2 "Orbivirus". ViralZone. ExPASy. Retrieved 2017-11-02.