APG III system

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The APG III system of flowering plant classification is the third version of a modern, mostly molecular-based, system of plant taxonomy being developed by the Angiosperm Phylogeny Group (APG). Published in 2009, it was superseded in 2016 by a further revision, the APG IV system. [1] [2] [3]

Contents

Along with the publication outlining the new system, there were two accompanying publications in the same issue of the Botanical Journal of the Linnean Society:

Organization

The APG III system recognized all of the 45 orders of the previous system, as well as 14 new ones. The order Ceratophyllales was erroneously marked as a new order, as it had been recognized in both of the previous APG systems. The newly recognized orders were:

Amborellales, Nymphaeales, Chloranthales, Petrosaviales, Trochodendrales, Buxales, Vitales, Zygophyllales, Picramniales, Huerteales, Berberidopsidales, Escalloniales, Bruniales, and Paracryphiales.

The designation of alternative "bracketed families" was abandoned in APG III, because its inclusion in the previous system had been unpopular. APG III recognized 413 families, 43 fewer than in the previous system. Forty-four of the 55 "bracketed families" were discontinued, and 20 other families were discontinued as well.

The discontinued bracketed families were:

Illiciaceae, Alliaceae, Agapanthaceae, Agavaceae, Aphyllanthaceae, Hesperocallidaceae, Hyacinthaceae, Laxmanniaceae, Ruscaceae, Themidaceae, Asphodelaceae, Hemerocallidaceae, Kingdoniaceae, Fumariaceae, Pteridophyllaceae, Didymelaceae, Tetracentraceae, Pterostemonaceae, Hypseocharitaceae, Francoaceae, Memecylaceae, Lepuropetalaceae, Rhoipteleaceae, Medusagynaceae, Quiinaceae, Malesherbiaceae, Turneraceae, Bretschneideraceae, Diegodendraceae, Cochlospermaceae, Peganaceae, Tetradiclidaceae, Nyssaceae, Ternstroemiaceae, Pellicieraceae, Aucubaceae, Donatiaceae, Lobeliaceae, Desfontainiaceae, Diervillaceae, Dipsacaceae, Linnaeaceae, Morinaceae, and Valerianaceae.

The other discontinued families were:

Limnocharitaceae, Luzuriagaceae, Sparganiaceae, Ixerbaceae, Ledocarpaceae, Heteropyxidaceae, Psiloxylaceae, Oliniaceae, Rhynchocalycaceae, Parnassiaceae, Maesaceae, Myrsinaceae, Theophrastaceae, Eremosynaceae, Polyosmaceae, Tribelaceae, Sphenostemonaceae, Aralidiaceae, Mackinlayaceae, and Melanophyllaceae.

21 families were accepted in the APG III system which had not been in the previous system, and a few families were moved to a different position. The newly recognized families are:

Cynomoriaceae, Haptanthaceae, Petermanniaceae, Schoepfiaceae, Limeaceae, Lophiocarpaceae, Montiaceae, Talinaceae, Anacampserotaceae, Centroplacaceae, Calophyllaceae, Guamatelaceae, Gerrardinaceae, Dipentodontaceae, Capparidaceae, Cleomaceae, Cytinaceae, Mitrastemonaceae, Metteniusaceae, Linderniaceae, and Thomandersiaceae.

The number of families not placed in any order was reduced from 39 to 10. Apodanthaceae and Cynomoriaceae were placed among the angiosperms, incertae sedis, that is, not in any group within the angiosperms. Eight other families were placed incertae sedis in various supra-ordinal groups within the angiosperms. The families not placed in any order were:

Apodanthaceae, Cynomoriaceae, Dasypogonaceae, Sabiaceae, Dilleniaceae, Icacinaceae, Metteniusaceae, Oncothecaceae, Vahliaceae, and Boraginaceae.

The paragraph below shows the number of families in each order and the placement of those families that were not included in any order. These figures were produced by simply counting the families in the text of the paper that established APG III. [1]

ORDERS: Amborellales (1), Nymphaeales (3), Austrobaileyales (3), Chloranthales (1), Canellales (2), Piperales (5), Magnoliales (6), Laurales (7), Acorales (1), Alismatales (13), Petrosaviales (1), Dioscoreales (3), Pandanales (5), Liliales (10), Asparagales (14), Arecales (1), Poales (16), Commelinales (5), Zingiberales (8), Ceratophyllales (1), Ranunculales (7), Proteales (3), Trochodendrales (1), Buxales (2), Gunnerales (2), Saxifragales (14), Vitales (1), Zygophyllales (2), Celastrales (2), Oxalidales (7), Malpighiales (35), Fabales (4), Rosales (9), Fagales (7), Cucurbitales (7), Geraniales (3), Myrtales (9), Crossosomatales (7), Picramniales (1), Sapindales (9), Huerteales (3), Brassicales (17), Malvales (10), Berberidopsidales (2), Santalales (7), Caryophyllales (34), Cornales (6), Ericales (22), Garryales (2), Gentianales (5), Solanales (5), Lamiales (23), Aquifoliales (5), Asterales (11), Escalloniales (1), Bruniales (2), Apiales (7), Paracryphiales (1), Dipsacales (2).

SUPRA-ORDINAL GROUPS: commelinids (1), basal eudicots (1), Pentapetalae (1), lamiids incertae sedis (3), core lamiids (2), angiosperms incertae sedis (2).

The circumscription of the family Icacinaceae remains especially doubtful. Apodytes and its close relative, Rhaphiostylis, as well as Emmotum , Cassinopsis , and a few other genera were provisionally retained within it until further studies can determine whether they properly belong there.

Three genera ( Gumillea , Nicobariodendron , and Petenaea ) were placed within the angiosperms incertae sedis. Gumillea had been unplaced in APG II. Nicobariodendron and Petenaea were newly added to the list. The latter was later placed into its own family Petenaeaceae in the order Huerteales [6] [7]

The classification is shown below in two versions. The short version goes to the level of orders and of families unplaced in an order. The detailed version shows all the families. Orders at the same level in the classification are arranged alphabetically. Note that orders may not contain the same families as in earlier versions of the APG system (APG system, APG II system). Further detail on relationships can be seen in the phylogenetic tree below.

Short version

Detailed version

Legend:

* = new family placement;
= newly recognized order for the APG system;
§ = new family circumscription described in the text;
$ = families that represent the broader circumscription of options available in APG II and favoured here;
$$ = families that were in square brackets in APG II, the narrower circumscriptions favoured here.

Angiosperms

Magnoliids

Monocots

Commelinids

Probable sister of eudicots

Eudicots

Core eudicots

Rosids

Fabids (eurosids I)

malvids (eurosids II)

Asterids

lamiids (euasterids I)

campanulids (euasterids II)

Taxa of uncertain position

Phylogeny

The APG III system was based on a phylogenetic tree for the angiosperms which included all of the 59 orders and 4 of the unplaced families. The systematic positions of the other 6 unplaced families was so uncertain that they could not be placed in any of the polytomies in the tree. They are shown in the classification table entitled "Detailed version" above, 4 in Euasterids I and 2 in Taxa of uncertain position.

The phylogenetic tree shown below was published with the APG III system, [1] but without some of the labels that are added here.

angiosperms  

Amborellales

Nymphaeales

Austrobaileyales

Chloranthales

magnoliids  

Canellales

Piperales

Magnoliales

Laurales

monocots  

Acorales

Alismatales

Petrosaviales

Dioscoreales

Pandanales

Liliales

Asparagales

commelinids  

Dasypogonaceae

Arecales

Poales

Commelinales

Zingiberales

Ceratophyllales

eudicots  

Ranunculales

Sabiaceae

Proteales

Trochodendrales

Buxales

core eudicots  

Gunnerales

Dilleniaceae

Saxifragales

rosids  

Vitales

eurosids  
fabids  

Zygophyllales

Celastrales

Oxalidales

Malpighiales

Fabales

Rosales

Fagales

Cucurbitales

malvids  

Geraniales

Myrtales

Crossosomatales

Picramniales

Sapindales

Huerteales

Brassicales

Malvales

Berberidopsidales

Santalales

Caryophyllales

asterids  

Cornales

Ericales

euasterids  
lamiids  

Garryales

Boraginaceae

Gentianales

Solanales

Lamiales

campanulids  

Aquifoliales

Asterales

Escalloniales

Bruniales

Apiales

Paracryphiales

Dipsacales

Subfamilies replacing discontinued families

A number of subfamilies have been proposed to replace some of the families which were optional (i.e. bracketed) in APG II, but have been discontinued in APG III. [8] These are shown in the table below.

Subfamilies replacing APG II bracketed families
APG II bracketed familyAPG III family: subfamily
AgapanthaceaeAmaryllidaceae: Agapanthoideae
AgavaceaeAsparagaceae: Agavoideae
AlliaceaeAmaryllidaceae: Allioideae
AmaryllidaceaeAmaryllidaceae: Amaryllidoideae
AphyllanthaceaeAsparagaceae: Aphyllanthoideae
AsparagaceaeAsparagaceae: Asparagoideae
AsphodelaceaeXanthorrhoeaceae: Asphodeloideae
HemerocallidaceaeXanthorrhoeaceae: Hemerocallidoideae
HesperocallidaceaeAsparagaceae: Agavoideae
HyacinthaceaeAsparagaceae: Scilloideae
LaxmanniaceaeAsparagaceae: Lomandroideae
RuscaceaeAsparagaceae: Nolinoideae
ThemidaceaeAsparagaceae: Brodiaeoideae
XanthorrhoeaceaeXanthorrhoeaceae: Xanthorrhoeoideae

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References

  1. 1 2 3 Angiosperm Phylogeny Group (2009), "An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III", Botanical Journal of the Linnean Society, 161 (2): 105–121, doi: 10.1111/j.1095-8339.2009.00996.x
  2. As easy as APG III - Scientists revise the system of classifying flowering plants, The Linnean Society of London, 2009-10-08, retrieved 2009-10-29
  3. APG III tidies up plant family tree, Horticulture Week, 2009-10-08, retrieved 2009-10-29
  4. Chase, Mark W. & Reveal, James L. (2009), "A phylogenetic classification of the land plants to accompany APG III", Botanical Journal of the Linnean Society, 161 (2): 122–127, doi: 10.1111/j.1095-8339.2009.01002.x
  5. Haston, E., Richardson, J.E., Stevens, P.F., Chase, M.W., Harris, D.J. (2009) The Linear Angiosperm Phylogeny Group (LAPG) III: a linear sequence of the families in APG III. Botanical Journal of the Linnean Society161, 128–131.
  6. Christenhusz, M. J. M., M. F. Fay, J. J. Clarkson, P. Gasson, J. Morales Can, J. B. Jimenez Barrios & M. W. Chase (2010). Petenaeaceae, a new angiosperm family in Huerteales with a distant relationship to Gerrardina (Gerrardinaceae), Botanical Journal of the Linnean Society 164: 16-25. http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8339.2010.01074.x/abstract
  7. Christenhusz, M. J. M., M. W. Chase, & M.F.Fay (2011). Preface to "Linear sequence, classification, synonymy, and bibliography of vascular plants: Lycophytes, ferns, gymnosperms and angiosperms", Phytotaxa 19: 4–6. http://www.mapress.com/phytotaxa/content/2011/f/pt00019p006.pdf
  8. Chase, M.W.; Reveal, J.L. & Fay, M.F. (2009), "A subfamilial classification for the expanded asparagalean families Amaryllidaceae, Asparagaceae and Xanthorrhoeaceae", Botanical Journal of the Linnean Society, 161 (2): 132–136, doi: 10.1111/j.1095-8339.2009.00999.x