Haplogroup Q-M3

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Haplogroup Q-M3
Possible time of origin10,000-15,000 years ago
Possible place of origin Beringia: Either East Asia or North America
Ancestor Q-L54
DescendantsQ-M19, Q-M194, Q-M199, Q-PAGES104, Q-PAGES131, Q-L663, Q-SA01, Q-L766, Q-L883, and Q-L888
Defining mutationsM3 (rs3894)

Haplogroup Q-M3 (Y-DNA) is a Y-chromosome DNA haplogroup. Haplogroup Q-M3 is a subclade of Haplogroup Q-L54. Haplogroup Q-M3 was previously known as Haplogroup Q3; currently Q-M3 is Q1b1a1a below Q1b-M346. [1]

Contents

In 1996 the research group at Stanford University headed by Dr. Peter Underhill first discovered the SNP that was to become known as M3. At the time, it was called DYS191. Later studies completed the genetic bridge by determining that Q-M3 was related to Q-M242-bearing populations who traveled through Central Asia to East Asia. [2]

Origin and distribution

Haplogroup Q-M3 is one of the Y-Chromosome haplogroups linked to the indigenous peoples of the Americas (over 90% of indigenous people in Meso & South America). Today, such lineages also include other Q-M242 branches (Q-M346, Q-L54, Q-P89.1, Q-NWT01, and Q-Z780), haplogroup C-M130 branches (C-M217 and C-P39), and R-M207, which are almost exclusively found in the North America. Haplogroup Q-M3 is defined by the presence of the (M3) single-nucleotide polymorphism (SNP). Q-M3 occurred on the Q-L54 lineage roughly 10-15 thousand years ago as the migration into the Americas was underway. There is some debate as to on which side of the Bering Strait this mutation occurred, but it definitely happened in the ancestors of the indigenous peoples of the Americas. [3]

The Americas

Populations carrying Q-M3 are widespread throughout the Americas. Since the discovery of Q-M3, several subclades of Q-M3 bearing populations have been discovered in the Americas as well. An example is in South America where some populations have a high prevalence of SNP M19 which defines subclade Q-M19. M19 has been detected in 59% of Amazonian Ticuna men and in 10% of Wayuu men. [4] Subclades Q-M19 and Q-M199 appear to be unique to South American populations and suggests that population isolation and perhaps even the establishment of tribes began soon after migration into the Americas. [5] The Kennewick Man has a Y chromosome that belongs to the most common sub-clade Q1b1a1a-M3 while the Anzick's Y chromosome belongs to the minor Q1b1a2-M971 lineage. [6]

Asia

Q-M3 is present in some Siberian populations in Asia. It is unclear whether these are remnants of the founding lineage or evidence of back-migrations from Beringia to East Asia. [7]

PopulationPaperNPercentageSNP Tested
Evens Malyarchuk 2011 [7] 2/63~3.2%M3

Europe

The Q-M3 lineage has not been detected in the European population.

Subclade distribution

Q-M19 M19 This lineage is found among Indigenous South Americans, such as the Ticuna and the Wayuu. [8] Origin: South America approximately 5,000 to 10,000 years ago.

Q-M194 It has only been found in South American populations. [8]

Q-M199 This lineage has only been found in South American populations.

Q-PAGES104 This lineage was discovered by the research group at the Whitehead Institute headed by Dr. David C. Page. Only limited demographic information is known.

Q-PAGES131 This lineage was discovered by the research group at the Whitehead Institute headed by Dr. David C. Page. Only limited demographic information is known.

Q-L663 This lineage was discovered by citizen scientists. It is linked to indigenous populations in Central Mexico and has been associated with the Otomies (Hñähñús, as they self-identify) from Hidalgo, Mexico (Gómez et al, 2021). Q-L663's paternal line was formed around 550 BCE. The man who is the most recent common ancestor of this line is estimated to have been born around 1250 CE. Extensive research on this haplogroup is being conducted by members of the New Mexico Genealogical Society, with at least 16 NGS Y-DNA tests as of 2023. The earliest known genealogical records for a Q-L663 descendant were for a man named Nicolás de Espinosa, a native of the Villa de los Lagos, Nueva Galicia, Mexico, who was born circa 1673.

Gómez, R., Vilar, M.G., Meraz-Ríos, M.A., Véliz, D., Zúñiga, G., Hernández-Tobías, E.A., Figueroa-Corona, M., Owings, A.C., Gaieski, J.B., Schurr, T.G., (2021). Y chromosome diversity in Aztlan descendants and its implications for the history of Central Mexico, iScience, 24 (5). https://doi.org/10.1016/j.isci.2021.102487

Q-SA01 This lineage was discovered by the research group headed by Dr. Theodore G. Schurr. [9]

Q-L766 This lineage was discovered by citizen scientists. It may be linked to indigenous populations in the Southwestern United States and Mexico.

Q-L883 This lineage was discovered by citizen scientists.

Q-L888 This lineage was discovered by citizen scientists.

Associated SNPs

Q-M3 is defined by the SNPs M3 and L341.2.

Q-M3 Phylogeny and Subgroups

Current status of the polygentic tree for Q-M3 is published by pinotti et al. in the article Y Chromosome Sequences Reveal a Short Beringian Standstill, Rapid Expansion, and early Population structure of Native American Founders (2018). Calibrated phylogeny of Y haplogroup for Q-M3 and its relation to the branches within Q-L54. [10]

In 2013 Thomas Krahn at the Genomic Research Center's made the following phylogentic Proposed Tree for haplogroup Q-M3.

American actress Jessica Alba's father, who is of Mexican descent, belongs to Haplogroup Q-M3. Her father partook in Henry Louis Gates' genealogy series Finding Your Roots . [11]

See also

Y-DNA Q-M242 subclades

Y-DNA backbone tree

Related Research Articles

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<span class="mw-page-title-main">Haplogroup Q-M242</span> Human Y chromosome DNA grouping common among Native Americans

Haplogroup Q or Q-M242 is a Y-chromosome DNA haplogroup. It has one primary subclade, Haplogroup Q1 (L232/S432), which includes numerous subclades that have been sampled and identified in males among modern populations.

<span class="mw-page-title-main">Haplogroup R1</span> Y-chromosome DNA haplogroup

Haplogroup R1, or R-M173, is a Y-chromosome DNA haplogroup. A primary subclade of Haplogroup R (R-M207), it is defined by the SNP M173. The other primary subclade of Haplogroup R is Haplogroup R2 (R-M479).

<span class="mw-page-title-main">Human Y-chromosome DNA haplogroup</span> Human DNA groupings

In human genetics, a human Y-chromosome DNA haplogroup is a haplogroup defined by mutations in the non-recombining portions of DNA from the male-specific Y chromosome. Many people within a haplogroup share similar numbers of short tandem repeats (STRs) and types of mutations called single-nucleotide polymorphisms (SNPs).

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<span class="mw-page-title-main">Haplogroup CT</span> Human Y chromosome DNA grouping indicating common ancestry

Haplogroup CT is a human Y chromosome haplogroup, defining one of the major paternal lineages of humanity.

In human population genetics, Y-Chromosome haplogroups define the major lineages of direct paternal (male) lines back to a shared common ancestor in Africa. Men in the same haplogroup share a set of differences, or markers, on their Y-Chromosome, which distinguish them from men in other haplogroups. These UEPs, or markers used to define haplogroups, are SNP mutations. Y-Chromosome Haplogroups all form "family trees" or "phylogenies", with both branches or sub-clades diverging from a common haplogroup ancestor, and also with all haplogroups themselves linked into one family tree which traces back ultimately to the most recent shared male line ancestor of all men alive today, called in popular science Y Chromosome Adam.

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Haplogroup Q-M346 is a subclade of Y-DNA Haplogroup Q. Haplogroup Q-M346 is defined by the presence of the M346 Single Nucleotide Polymorphism (SNP).

Haplogroup Q-L54 is a subclade of Y-DNA haplogroup Q-L53. Q1a3a-L54 is defined by the presence of the L54 Single Nucleotide Polymorphism (SNP).

Haplogroup Q-L275 or Haplogroup Q2 is a human Y-chromosome DNA haplogroup believed to have originated in Eurasia. Haplogroup Q-L275 is defined by the presence of the L275 single-nucleotide polymorphism (SNP). Haplogroup Q-L275 can be identified through genealogical DNA testing.

Haplogroup Q-NWT01 is a subclade of Y-DNA Haplogroup Q-MEH2. Haplogroup Q-NWT01 is defined by the presence of the NWT01 Single Nucleotide Polymorphism (SNP).

Haplogroup Q-P89.1 is a subclade of Y-DNA Haplogroup Q-MEH2. Haplogroup Q-P89.1 is defined by the presence of the P89.1 Single Nucleotide Polymorphism (SNP). In 2010, Q-P89.1 was reclassified as "private" and removed from the haplotree.

Haplogroup Q-M25, also known as Q1a1b is a subclade or branch of human Y-DNA haplogroup Q-F1096 (Q1a1), which is, in turn, a subclade of Q-MEH2 (Q1a). In human genetics, each Y-DNA haplogroup constitutes a biological paternal lineages back to a shared common male ancestor.

Haplogroup Q-M120, also known as Q1a1a1, is a Y-DNA haplogroup. It is the only primary branch of haplogroup Q1a1a (F746/NWT01). The lineage is most common amongst modern populations in eastern Eurasia.

Q-L53 is a subclade of haplogroup Q-M346. Q-L53 is defined by the presence of the L53 Single Nucleotide Polymorphism (SNP).

Haplogroup Q-Z780 is a subclade of the Y-DNA Haplogroup Q-L54. Q-Z780 is defined by the presence of the Z780 Single Nucleotide Polymorphism (SNP).

Haplogroup Q-M323 is a subclade of Y-DNA Haplogroup Q-M346. Haplogroup Q-M323 is defined by the presence of the M323 Single Nucleotide Polymorphism (SNP).

Haplogroup P1, also known as P-M45 and K2b2a, is a Y-chromosome DNA haplogroup in human genetics. Defined by the SNPs M45 and PF5962, P1 is a primary branch (subclade) of P.

Haplogroup Q-L804 (Y-DNA) is a Y-chromosome DNA haplogroup. Haplogroup Q-L804 is a subclade of Haplogroup Q-L54. Currently Q-L804 is Q1b1a1b below Q1b-M346.

References

  1. Y-DNA Haplogroup Q and its Subclades - 2018, ISOGG
  2. Wells, Spencer (2004). The Journey of Man : A Genetic Odyssey. New York, NY: Random House Trade Paperbacks. ISBN   978-0-8129-7146-0.
  3. Grugni, Viola; Raveane, Alessandro; Ongaro, Linda; Battaglia, Vincenza; Trombetta, Beniamino; Colombo, Giulia; Capodiferro, Marco Rosario; Olivieri, Anna; Achilli, Alessandro; Perego, Ugo A.; Motta, Jorge; Tribaldos, Maribel; Woodward, Scott R.; Ferretti, Luca; Cruciani, Fulvio; Torroni, Antonio; Semino, Ornella (24 January 2019). "Analysis of the human Y-chromosome haplogroup Q characterizes ancient population movements in Eurasia and the Americas". BMC Biology. 17 (1): 3. doi: 10.1186/s12915-018-0622-4 . eISSN   1741-7007. PMC   6345020 . PMID   30674303.
  4. Ruiz-Linares, A.; Ortiz-Barrientos, D.; Figueroa, M.; Mesa, N.; Munera, J. G.; Bedoya, G.; Velez, I. D.; Garcia, L. F.; Perez-Lezaun, A. (1999). "Microsatellites provide evidence for Y chromosome diversity among the founders of the New World". Proceedings of the National Academy of Sciences. 96 (11): 6312–7. Bibcode:1999PNAS...96.6312R. doi: 10.1073/pnas.96.11.6312 . PMC   26878 . PMID   10339584.
  5. Bortolini, M; Salzano, F; Thomas, M; Stuart, S; Nasanen, S; Bau, C; Hutz, M; Layrisse, Z; Petzlerler, M (2003). "Y-Chromosome Evidence for Differing Ancient Demographic Histories in the Americas". The American Journal of Human Genetics. 73 (3): 524–39. doi:10.1086/377588. PMC   1180678 . PMID   12900798.
  6. Kivisild, Toomas (2017-03-04). "The study of human Y chromosome variation through ancient DNA". Human Genetics. Springer Nature. 136 (5): 529–546. doi:10.1007/s00439-017-1773-z. ISSN   0340-6717. PMC   5418327 . PMID   28260210.
  7. 1 2 Malyarchuk, Boris; Derenko, Miroslava; Denisova, Galina; Maksimov, Arkady; Wozniak, Marcin; Grzybowski, Tomasz; Dambueva, Irina; Zakharov, Ilya (2011). "Ancient links between Siberians and Native Americans revealed by subtyping the Y chromosome haplogroup Q1a". Journal of Human Genetics. 56 (8): 583–8. doi: 10.1038/jhg.2011.64 . PMID   21677663.
  8. 1 2 (2003) "Y-Chromosome Evidence for Differing Ancient Demographic Histories in the Americas," Archived 2011-04-28 at the Wayback Machine (pdf) Maria-Catira Bortolini, Francisco M. Salzano
  9. "Theodore G. Schurr".
  10. Pinotti, Thomaz; Bergström, Anders; Geppert, Maria; Bawn, Matt; Ohasi, Dominique; Shi, Wentao; Lacerda, Daniela R.; Solli, Arne; Norstedt, Jakob; Reed, Kate; Dawtry, Kim; González-Andrade, Fabricio; Paz-y-Miño, Cesar; Revollo, Susana; Cuellar, Cinthia; Jota, Marilza S.; Santos, José E.; Ayub, Qasim; Kivisild, Toomas; Sandoval, José R.; Fujita, Ricardo; Xue, Yali; Roewer, Lutz; Santos, Fabrício R.; Tyler-Smith, Chris (2018). "Y Chromosome Sequences Reveal a Short Beringian Standstill, Rapid Expansion, and early Population structure of Native American Founders". Current Biology. Elsevier BV. 29 (1): 149–157.e3. doi: 10.1016/j.cub.2018.11.029 . hdl: 20.500.12727/6107 . ISSN   0960-9822. PMID   30581024.
  11. Stated on Finding Your Roots , PBS, February 5, 2015