Intramolecular force

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An intramolecular force (or primary forces) is any force that binds together the atoms making up a molecule or compound, not to be confused with intermolecular forces, which are the forces present between molecules. [1] The subtle difference in the name comes from the Latin roots of English with inter meaning between or among and intra meaning inside. [2] Chemical bonds are considered to be intramolecular forces which are often stronger than intermolecular forces present between non-bonding atoms or molecules.

Contents

Types

The classical model identifies three main types of chemical bonds — ionic, covalent, and metallic — distinguished by the degree of charge separation between participating atoms. [3] The characteristics of the bond formed can be predicted by the properties of constituent atoms, namely electronegativity. They differ in the magnitude of their bond enthalpies, a measure of bond strength, and thus affect the physical and chemical properties of compounds in different ways. % of ionic character is directly proportional difference in electronegitivity of bonded atom.[ clarification needed ]

Ionic bond

Ionic bonding between sodium and chlorine IonicBondingRH11.png
Ionic bonding between sodium and chlorine

An ionic bond can be approximated as complete transfer of one or more valence electrons of atoms participating in bond formation, resulting in a positive ion and a negative ion bound together by electrostatic forces. [4] Electrons in an ionic bond tend to be mostly found around one of the two constituent atoms due to the large electronegativity difference between the two atoms, generally more than 1.9, (greater difference in electronegativity results in a stronger bond); this is often described as one atom giving electrons to the other. [5] This type of bond is generally formed between a metal and nonmetal, such as sodium and chlorine in NaCl. Sodium would give an electron to chlorine, forming a positively charged sodium ion and a negatively charged chloride ion.

Covalent bond

This is a ball and stick model of a water molecule. It has a permanent dipole pointing to the bottom left hand side. Ball and stick model of a water molecule.png
This is a ball and stick model of a water molecule. It has a permanent dipole pointing to the bottom left hand side.

In a true covalent bond, the electrons are shared evenly between the two atoms of the bond; there is little or no charge separation. Covalent bonds are generally formed between two nonmetals. There are several types of covalent bonds: in polar covalent bonds, electrons are more likely to be found around one of the two atoms, whereas in nonpolar covalent bonds, electrons are evenly shared. Homonuclear diatomic molecules are purely covalent. The polarity of a covalent bond is determined by the electronegativities of each atom and thus a polar covalent bond has a dipole moment pointing from the partial positive end to the partial negative end. [6] Polar covalent bonds represent an intermediate type in which the electrons are neither completely transferred from one atom to another nor evenly shared.

Metallic bond

Metallic bonds generally form within a pure metal or metal alloy. Metallic electrons are generally delocalized; the result is a large number of free electrons around positive nuclei, sometimes called an electron sea.

Bond formation

Carbon-dioxide-2D-dimensions.svg
Carbon monoxide 2D.svg
Comparison of the bond lengths between carbon and oxygen in a double and triple bond.

Bonds are formed by atoms so that they are able to achieve a lower energy state. Free atoms will have more energy than a bonded atom. This is because some energy is released during bond formation, allowing the entire system to achieve a lower energy state. The bond length, or the minimum separating distance between two atoms participating in bond formation, is determined by their repulsive and attractive forces along the internuclear direction. [3] As the two atoms get closer and closer, the positively charged nuclei repel, creating a force that attempts to push the atoms apart. As the two atoms get further apart, attractive forces work to pull them back together. Thus an equilibrium bond length is achieved and is a good measure of bond stability.

Biochemistry

The alpha helix structure necessary for the stability of DNA is held together by the electrostatic intramolecular forces in the protein. Alpha Helix Ribbon.svg
The alpha helix structure necessary for the stability of DNA is held together by the electrostatic intramolecular forces in the protein.

Intramolecular forces are extremely important in the field of biochemistry, where it comes into play at the most basic levels of biological structures. Intramolecular forces such as disulfide bonds give proteins and DNA their structure. Proteins derive their structure from the intramolecular forces that shape them and hold them together. The main source of structure in these molecules is the interaction between the amino acid residues that form the foundation of proteins. [7] The interactions between residues of the same proteins forms the secondary structure of the protein, allowing for the formation of beta sheets and alpha helices, which are important structures for proteins and in the case of alpha helices, for DNA.

See also

Related Research Articles

<span class="mw-page-title-main">Chemical bond</span> Lasting attraction between atoms that enables the formation of chemical compounds

A chemical bond is a lasting attraction between atoms, ions or molecules that enables the formation of chemical compounds. The bond may result from the electrostatic force between oppositely charged ions as in ionic bonds or through the sharing of electrons as in covalent bonds. The strength of chemical bonds varies considerably; there are "strong bonds" or "primary bonds" such as covalent, ionic and metallic bonds, and "weak bonds" or "secondary bonds" such as dipole–dipole interactions, the London dispersion force and hydrogen bonding.

<span class="mw-page-title-main">Covalent bond</span> Chemical bond that involves the sharing of electron pairs between atoms

A covalent bond is a chemical bond that involves the sharing of electrons to form electron pairs between atoms. These electron pairs are known as shared pairs or bonding pairs, and the stable balance of attractive and repulsive forces between atoms, when they share electrons, is known as covalent bonding. For many molecules, the sharing of electrons allows each atom to attain the equivalent of a full valence shell, corresponding to a stable electronic configuration. In organic chemistry, covalent bonding is much more common than ionic bonding.

Electronegativity, symbolized as χ, is the tendency for an atom of a given chemical element to attract shared electrons when forming a chemical bond. An atom's electronegativity is affected by both its atomic number and the distance at which its valence electrons reside from the charged nucleus. The higher the associated electronegativity, the more an atom or a substituent group attracts electrons. Electronegativity serves as a simple way to quantitatively estimate the bond energy, and the sign and magnitude of a bond's chemical polarity, which characterizes a bond along the continuous scale from covalent to ionic bonding. The loosely defined term electropositivity is the opposite of electronegativity: it characterizes an element's tendency to donate valence electrons.

<span class="mw-page-title-main">Hydrogen bond</span> Intermolecular attraction between a hydrogen-donor pair and an acceptor

In chemistry, a hydrogen bond is a primarily electrostatic force of attraction between a hydrogen (H) atom which is covalently bound to a more electronegative "donor" atom or group (Dn), and another electronegative atom bearing a lone pair of electrons—the hydrogen bond acceptor (Ac). Such an interacting system is generally denoted Dn−H···Ac, where the solid line denotes a polar covalent bond, and the dotted or dashed line indicates the hydrogen bond. The most frequent donor and acceptor atoms are the second-row elements nitrogen (N), oxygen (O), and fluorine (F).

<span class="mw-page-title-main">Ionic bonding</span> Chemical bonding involving attraction between ions

Ionic bonding is a type of chemical bonding that involves the electrostatic attraction between oppositely charged ions, or between two atoms with sharply different electronegativities, and is the primary interaction occurring in ionic compounds. It is one of the main types of bonding along with covalent bonding and metallic bonding. Ions are atoms with an electrostatic charge. Atoms that gain electrons make negatively charged ions. Atoms that lose electrons make positively charged ions. This transfer of electrons is known as electrovalence in contrast to covalence. In the simplest case, the cation is a metal atom and the anion is a nonmetal atom, but these ions can be of a more complex nature, e.g. molecular ions like NH+
4
or SO2−
4
. In simpler words, an ionic bond results from the transfer of electrons from a metal to a non-metal in order to obtain a full valence shell for both atoms.

An intermolecular force (IMF) is the force that mediates interaction between molecules, including the electromagnetic forces of attraction or repulsion which act between atoms and other types of neighbouring particles, e.g. atoms or ions. Intermolecular forces are weak relative to intramolecular forces – the forces which hold a molecule together. For example, the covalent bond, involving sharing electron pairs between atoms, is much stronger than the forces present between neighboring molecules. Both sets of forces are essential parts of force fields frequently used in molecular mechanics.

<span class="mw-page-title-main">Molecule</span> Electrically neutral group of two or more atoms

A molecule is a group of two or more atoms held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions which satisfy this criterion. In quantum physics, organic chemistry, and biochemistry, the distinction from ions is dropped and molecule is often used when referring to polyatomic ions.

<span class="mw-page-title-main">Ionic compound</span> Chemical compound involving ionic bonding

In chemistry, an ionic compound is a chemical compound composed of ions held together by electrostatic forces termed ionic bonding. The compound is neutral overall, but consists of positively charged ions called cations and negatively charged ions called anions. These can be simple ions such as the sodium (Na+) and chloride (Cl) in sodium chloride, or polyatomic species such as the ammonium (NH+
4
) and carbonate (CO2−
3
) ions in ammonium carbonate. Individual ions within an ionic compound usually have multiple nearest neighbours, so are not considered to be part of molecules, but instead part of a continuous three-dimensional network. Ionic compounds usually form crystalline structures when solid.

<span class="mw-page-title-main">Octet rule</span> Chemical rule of thumb

The octet rule is a chemical rule of thumb that reflects the theory that main-group elements tend to bond in such a way that each atom has eight electrons in its valence shell, giving it the same electronic configuration as a noble gas. The rule is especially applicable to carbon, nitrogen, oxygen, and the halogens; although more generally the rule is applicable for the s-block and p-block of the periodic table. Other rules exist for other elements, such as the duplet rule for hydrogen and helium, or the 18-electron rule for transition metals.

<span class="mw-page-title-main">Chemical polarity</span> Separation of electric charge in a molecule

In chemistry, polarity is a separation of electric charge leading to a molecule or its chemical groups having an electric dipole moment, with a negatively charged end and a positively charged end.

<span class="mw-page-title-main">Lewis structure</span> Diagrams for the bonding between atoms of a molecule and lone pairs of electrons

Lewis structures, also known as Lewis dot formulas,Lewis dot structures, electron dot structures, or Lewis electron dot structures (LEDS), are diagrams that show the bonding between atoms of a molecule, as well as the lone pairs of electrons that may exist in the molecule. A Lewis structure can be drawn for any covalently bonded molecule, as well as coordination compounds. The Lewis structure was named after Gilbert N. Lewis, who introduced it in his 1916 article The Atom and the Molecule. Lewis structures extend the concept of the electron dot diagram by adding lines between atoms to represent shared pairs in a chemical bond.

<span class="mw-page-title-main">Valence electron</span> An outer shell electron which is associated with an atom

In chemistry and physics, a valence electron is an electron in the outer shell associated with an atom, and that can participate in the formation of a chemical bond if the outer shell is not closed. In a single covalent bond, both atoms in the bond contribute one valence electron in order to form a shared pair.

In chemistry, a non-covalent interaction differs from a covalent bond in that it does not involve the sharing of electrons, but rather involves more dispersed variations of electromagnetic interactions between molecules or within a molecule. The chemical energy released in the formation of non-covalent interactions is typically on the order of 1–5 kcal/mol. Non-covalent interactions can be classified into different categories, such as electrostatic, π-effects, van der Waals forces, and hydrophobic effects.

<span class="mw-page-title-main">Molecular solid</span> Solid consisting of discrete molecules

A molecular solid is a solid consisting of discrete molecules. The cohesive forces that bind the molecules together are van der Waals forces, dipole-dipole interactions, quadrupole interactions, π-π interactions, hydrogen bonding, halogen bonding, London dispersion forces, and in some molecular solids, coulombic interactions. Van der Waals, dipole interactions, quadrupole interactions, π-π interactions, hydrogen bonding, and halogen bonding are typically much weaker than the forces holding together other solids: metallic, ionic, and network solids. Intermolecular interactions, typically do not involve delocalized electrons, unlike metallic and certain covalent bonds. Exceptions are charge-transfer complexes such as the tetrathiafulvane-tetracyanoquinodimethane (TTF-TCNQ), a radical ion salt. These differences in the strength of force and electronic characteristics from other types of solids give rise to the unique mechanical, electronic, and thermal properties of molecular solids.

This glossary of chemistry terms is a list of terms and definitions relevant to chemistry, including chemical laws, diagrams and formulae, laboratory tools, glassware, and equipment. Chemistry is a physical science concerned with the composition, structure, and properties of matter, as well as the changes it undergoes during chemical reactions; it features an extensive vocabulary and a significant amount of jargon.

<span class="mw-page-title-main">Chemical compound</span> Substance composed of multiple elements that are chemically bonded

A chemical compound is a chemical substance composed of many identical molecules containing atoms from more than one chemical element held together by chemical bonds. A molecule consisting of atoms of only one element is therefore not a compound. A compound can be transformed into a different substance by a chemical reaction, which may involve interactions with other substances. In this process, bonds between atoms may be broken and/or new bonds formed.

A network solid or covalent network solid is a chemical compound in which the atoms are bonded by covalent bonds in a continuous network extending throughout the material. In a network solid there are no individual molecules, and the entire crystal or amorphous solid may be considered a macromolecule. Formulas for network solids, like those for ionic compounds, are simple ratios of the component atoms represented by a formula unit.

Solids can be classified according to the nature of the bonding between their atomic or molecular components. The traditional classification distinguishes four kinds of bonding:

Pauling's principle of electroneutrality states that each atom in a stable substance has a charge close to zero. It was formulated by Linus Pauling in 1948 and later revised. The principle has been used to predict which of a set of molecular resonance structures would be the most significant, to explain the stability of inorganic complexes and to explain the existence of π-bonding in compounds and polyatomic anions containing silicon, phosphorus or sulfur bonded to oxygen; it is still invoked in the context of coordination complexes. However, modern computational techniques indicate many stable compounds have a greater charge distribution than the principle predicts.

In theoretical chemistry, the charge-shift bond is a proposed new class of chemical bonds that sits alongside the three familiar families of covalent, ionic, and metallic bonds where electrons are shared or transferred respectively. The charge shift bond derives its stability from the resonance of ionic forms rather than the covalent sharing of electrons which are often depicted as having electron density between the bonded atoms. A feature of the charge shift bond is that the predicted electron density between the bonded atoms is low. It has long been known from experiment that the accumulation of electric charge between the bonded atoms is not necessarily a feature of covalent bonds.

References

  1. Zumdahl, Steven S.; Zumdahl, Susan A. (2007). Chemistry (7th ed.). Boston: Houghton Mifflin. ISBN   978-0618713707. OCLC   85824942.
  2. "Inter vs. Intra". www.grammar.com. Retrieved 2018-04-26.
  3. 1 2 Oxtoby, David W.; Gills, H. P.; Campion, Alan (2012). Principles of modern chemistry (7th ed.). Belmont, Calif.: Brooks/Cole Cengage Learning. ISBN   978-0-8400-4931-5.
  4. Bader, R. F. W.; Henneker, W. H. (1965). "The Ionic Bond". Journal of the American Chemical Society. 87 (14): 3063–3068. doi:10.1021/ja01092a008.
  5. "3.9: Intramolecular forces and intermolecular forces". Chemistry LibreTexts. 2022-04-05. Retrieved 2022-10-09.
  6. Helmenstine, Anne Marie. "Understand What a Covalent Bond Is in Chemistry". ThoughtCo.
  7. Nelson, David L.; Cox, Michael M.; Lehninger, Albert L. (2013). Lehninger principles of biochemistry (6th ed.). New York: W.H. Freeman and Company. ISBN   9781429234146. OCLC   824794893.