| Tournament details | |
|---|---|
| Country | Japan | 
| Final positions | |
| Champions | Nagoya Grampus Eight | 
| Runners-up | Sanfrecce Hiroshima | 
| Semifinalists | |
Statistics of Emperor's Cup in the 1999 season.
It was contested by 80 teams, and Nagoya Grampus Eight won the championship.
Nagoya Grampus Eight won the championship.