AMFR

AMFR
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2EJS, 2LVN, 2LVO, 2LVP, 2LVQ, 2LXH, 2LXP, 3FSH, 3H8K, 3TIW, 4G3O, 4LAD
Identifiers
Aliases	AMFR , GP78, RNF45, autocrine motility factor receptor
External IDs	OMIM: 603243; MGI: 1345634; HomoloGene: 888; GeneCards: AMFR; OMA:AMFR - orthologs
Gene location (Human) Chr. Chromosome 16 (human) [1] Band 16q13 Start 56,361,452 bp [1] End 56,425,545 bp [1]
Gene location (Mouse) Chr. Chromosome 8 (mouse) [2] Band 8 C5|8 45.96 cM Start 94,698,216 bp [2] End 94,739,470 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in stromal cell of endometrium right testis left testis gastrocnemius muscle muscle of thigh right adrenal cortex Achilles tendon ventricular zone left adrenal gland left adrenal cortex Top expressed in spermatocyte Ileal epithelium spermatid secondary oocyte granulocyte decidua ankle dentate gyrus of hippocampal formation granule cell triceps brachii muscle digastric muscle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein-macromolecule adaptor activity chaperone binding ubiquitin protein ligase activity metal ion binding ubiquitin-protein transferase activity ubiquitin-ubiquitin ligase activity protein binding ubiquitin-specific protease binding transferase activity identical protein binding BAT3 complex binding signaling receptor activity Cellular component cytoplasm integral component of membrane membrane growth cone integral component of endoplasmic reticulum membrane soma dendrite Derlin-1 retrotranslocation complex perinuclear region of cytoplasm nucleus endoplasmic reticulum endoplasmic reticulum membrane Golgi apparatus endoplasmic reticulum quality control compartment protein-containing complex ubiquitin ligase complex cytosol Biological process ERAD pathway ubiquitin-dependent protein catabolic process ageing protein polyubiquitination endoplasmic reticulum unfolded protein response protein K48-linked ubiquitination protein complex oligomerization protein ubiquitination ubiquitin-dependent ERAD pathway learning or memory positive regulation of protein binding signal transduction protein autoubiquitination protein folding endoplasmic reticulum mannose trimming Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 267 23802 Ensembl ENSG00000159461 ENSMUSG00000031751 UniProt Q9UKV5 Q9R049 RefSeq (mRNA) NM_001144 NM_138958 NM_001323511 NM_001323512 NM_011787 RefSeq (protein) NP_001135 NP_001310440 NP_001310441 NP_035917 Location (UCSC) Chr 16: 56.36 – 56.43 Mb Chr 8: 94.7 – 94.74 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Autocrine motility factor receptor, isoform 2 is a protein that in humans is encoded by the AMFR gene. ^{[5] [6]}

Autocrine motility factor is a tumor motility-stimulating protein secreted by tumor cells. The protein encoded by this gene is a glycosylated transmembrane protein and a receptor for autocrine motility factor. The receptor, which shows some sequence similarity to tumor protein p53, is localized to the leading and trailing edges of carcinoma cells. ^[6]

Interactions

AMFR has been shown to interact with Valosin-containing protein. ^{[7] [8]}

References

1. GRCh38: Ensembl release 89: ENSG00000159461 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000031751 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Watanabe H, Carmi P, Hogan V, Raz T, Silletti S, Nabi IR, Raz A (Aug 1991). "Purification of human tumor cell autocrine motility factor and molecular cloning of its receptor". J Biol Chem. 266 (20): 13442–8. doi: 10.1016/S0021-9258(18)98859-9 . PMID   1649192.
6. "Entrez Gene: AMFR autocrine motility factor receptor".
7. Zhong, Xiaoyan; Shen Yuxian; Ballar Petek; Apostolou Andria; Agami Reuven; Fang Shengyun (Oct 2004). "AAA ATPase p97/valosin-containing protein interacts with gp78, a ubiquitin ligase for endoplasmic reticulum-associated degradation". J. Biol. Chem. 279 (44). United States: 45676–84. doi: 10.1074/jbc.M409034200 . ISSN   0021-9258. PMID   15331598.
8. Lee, Joon No; Zhang Xiangyu; Feramisco Jamison D; Gong Yi; Ye Jin (Nov 2008). "Unsaturated fatty acids inhibit proteasomal degradation of Insig-1 at a postubiquitination step". J. Biol. Chem. 283 (48). United States: 33772–83. doi: 10.1074/jbc.M806108200 . ISSN   0021-9258. PMC   2586246 . PMID   18835813.

External links

• Human AMFR genome location and AMFR gene details page in the UCSC Genome Browser .

Further reading

• Huang B, Xie Y, Raz A (1995). "Identification of an upstream region that controls the transcription of the human autocrine motility factor receptor". Biochem. Biophys. Res. Commun. 212 (3): 727–42. Bibcode:1995BBRC..212..727H. doi:10.1006/bbrc.1995.2031. PMID   7626106.
• Hillier LD, Lennon G, Becker M, et al. (1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807–28. doi: 10.1101/gr.6.9.807 . PMID   8889549.
• Shimizu K, Tani M, Watanabe H, et al. (1999). "The autocrine motility factor receptor gene encodes a novel type of seven transmembrane protein". FEBS Lett. 456 (2): 295–300. doi: 10.1016/S0014-5793(99)00966-7 . PMID   10456327. S2CID   39270348.
• Fang S, Ferrone M, Yang C, et al. (2002). "The tumor autocrine motility factor receptor, gp78, is a ubiquitin protein ligase implicated in degradation from the endoplasmic reticulum". Proc. Natl. Acad. Sci. U.S.A. 98 (25): 14422–7. Bibcode:2001PNAS...9814422F. doi: 10.1073/pnas.251401598 . PMC   64697 . PMID   11724934.
• Luo Y, Long JM, Lu C, et al. (2002). "A link between maze learning and hippocampal expression of neuroleukin and its receptor gp78". J. Neurochem. 80 (2): 354–61. doi: 10.1046/j.0022-3042.2001.00707.x . PMID   11902125. S2CID   29857457.
• Tímár J, Rásó E, Döme B, et al. (2002). "Expression and function of the AMF receptor by human melanoma in experimental and clinical systems". Clin. Exp. Metastasis. 19 (3): 225–32. doi:10.1023/A:1015595708241. PMID   12067203. S2CID   453423.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Liang JS, Kim T, Fang S, et al. (2003). "Overexpression of the tumor autocrine motility factor receptor Gp78, a ubiquitin protein ligase, results in increased ubiquitinylation and decreased secretion of apolipoprotein B100 in HepG2 cells". J. Biol. Chem. 278 (26): 23984–8. doi: 10.1074/jbc.M302683200 . PMID   12670940.
• Takanami I, Takeuchi K (2003). "Autocrine motility factor-receptor gene expression in lung cancer". Jpn. J. Thorac. Cardiovasc. Surg. 51 (8): 368–73. doi:10.1007/BF02719469. PMID   12962414.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Registre M, Goetz JG, St Pierre P, et al. (2004). "The gene product of the gp78/AMFR ubiquitin E3 ligase cDNA is selectively recognized by the 3F3A antibody within a subdomain of the endoplasmic reticulum". Biochem. Biophys. Res. Commun. 320 (4): 1316–22. Bibcode:2004BBRC..320.1316R. doi:10.1016/j.bbrc.2004.06.089. PMID   15303277.
• Zhong X, Shen Y, Ballar P, et al. (2004). "AAA ATPase p97/valosin-containing protein interacts with gp78, a ubiquitin ligase for endoplasmic reticulum-associated degradation". J. Biol. Chem. 279 (44): 45676–84. doi: 10.1074/jbc.M409034200 . PMID   15331598.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Song BL, Sever N, DeBose-Boyd RA (2005). "Gp78, a membrane-anchored ubiquitin ligase, associates with Insig-1 and couples sterol-regulated ubiquitination to degradation of HMG CoA reductase". Mol. Cell. 19 (6): 829–40. doi: 10.1016/j.molcel.2005.08.009 . PMID   16168377.
• Kaynak K, Kara M, Oz B, et al. (2006). "Autocrine motility factor receptor expression implies an unfavourable prognosis in resected stage I pulmonary adenocarcinomas". Acta Chir. Belg. 105 (4): 378–82. doi:10.1080/00015458.2005.11679740. PMID   16184720. S2CID   3032480.
• Ye Y, Shibata Y, Kikkert M, et al. (2006). "Inaugural Article: Recruitment of the p97 ATPase and ubiquitin ligases to the site of retrotranslocation at the endoplasmic reticulum membrane". Proc. Natl. Acad. Sci. U.S.A. 102 (40): 14132–8. Bibcode:2005PNAS..10214132Y. doi: 10.1073/pnas.0505006102 . PMC   1242302 . PMID   16186510.
• Chen B, Mariano J, Tsai YC, et al. (2006). "The activity of a human endoplasmic reticulum-associated degradation E3, gp78, requires its Cue domain, RING finger, and an E2-binding site". Proc. Natl. Acad. Sci. U.S.A. 103 (2): 341–6. Bibcode:2006PNAS..103..341C. doi: 10.1073/pnas.0506618103 . PMC   1326157 . PMID   16407162.
• Haga A, Tanaka N, Funasaka T, et al. (2006). "The autocrine motility factor (AMF) and AMF-receptor combination needs sugar chain recognition ability and interaction using the C-terminal region of AMF". J. Mol. Biol. 358 (3): 741–53. doi:10.1016/j.jmb.2006.02.046. PMID   16563432.
• Shen Y, Ballar P, Fang S (2006). "Ubiquitin ligase gp78 increases solubility and facilitates degradation of the Z variant of alpha-1-antitrypsin". Biochem. Biophys. Res. Commun. 349 (4): 1285–93. Bibcode:2006BBRC..349.1285S. doi:10.1016/j.bbrc.2006.08.173. PMID   16979136.