AP5S1

Last updated
AP5S1
Identifiers
Aliases AP5S1 , C20orf29, adaptor related protein complex 5 sigma 1 subunit, adaptor related protein complex 5 subunit sigma 1
External IDs OMIM: 614824 MGI: 1916846 HomoloGene: 23095 GeneCards: AP5S1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_018347
NM_001204446
NM_001204447

NM_001291031
NM_001291032
NM_027129
NM_001355593

RefSeq (protein)

NP_001191375
NP_001191376
NP_060817

NP_001277960
NP_001277961
NP_081405
NP_001342522

Location (UCSC) Chr 20: 3.82 – 3.83 Mb Chr 2: 131.05 – 131.06 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

AP-5 complex subunit sigma (AP5S1) is a protein that in humans is encoded by the AP5S1 gene. [5]

Function

The protein encoded by this gene is the small subunit of the AP5 adaptor complex. [6] Variants in this gene have not been implicated in any disease but damaging variants in AP5Z1, the gene encoding one of the large subunits in this complex, are associated with SPG48, a type of hereditary spastic paraplegia. [7] [8] In addition, damaging variants in the genes encoding two proteins that stably associate with the AP-5 adaptor complex are also associated with forms of hereditary spastic paraplegia - SPG11 with the disease of the same name [9] and ZFYVE26 with SPG15. [10]

Related Research Articles

<span class="mw-page-title-main">Vesicular transport adaptor protein</span>

Vesicular transport adaptor proteins are proteins involved in forming complexes that function in the trafficking of molecules from one subcellular location to another. These complexes concentrate the correct cargo molecules in vesicles that bud or extrude off of one organelle and travel to another location, where the cargo is delivered. While some of the details of how these adaptor proteins achieve their trafficking specificity has been worked out, there is still much to be learned.

<span class="mw-page-title-main">Spastin</span>

The human gene SPAST codes for the microtubule-severing protein of the same name, commonly known as spastin.

<span class="mw-page-title-main">Atlastin</span> Protein-coding gene in the species Homo sapiens

Atlastin, or Atlastin-1, is a protein that in humans is encoded by the ATL1 gene.

<span class="mw-page-title-main">Paraplegin</span>

Paraplegin is a protein that in humans is encoded by the SPG7 gene located on chromosome 16.

<span class="mw-page-title-main">SPG20</span>

Spartin is a protein that in humans is encoded by the SPG20 gene.

<span class="mw-page-title-main">KIF5A</span>

Kinesin heavy chain isoform 5A is a protein that in humans is encoded by the KIF5A gene.

<span class="mw-page-title-main">NIPA1</span>

Non-imprinted in Prader-Willi/Angelman syndrome region protein 1 is a protein that in humans is encoded by the NIPA1 gene. This gene encodes a potential transmembrane protein which functions either as a receptor or transporter molecule, possibly as a magnesium transporter. This protein is thought to play a role in nervous system development and maintenance. Alternative splice variants have been described, but their biological nature has not been determined. Mutations in this gene have been associated with the human genetic disease autosomal dominant spastic paraplegia 6.

<span class="mw-page-title-main">AP4B1</span> Protein-coding gene in the species Homo sapiens

AP-4 complex subunit beta-1 is a protein that in humans is encoded by the AP4B1 gene.

<span class="mw-page-title-main">AP4M1</span> Protein-coding gene in the species Homo sapiens

AP-4 complex subunit mu-1 is a protein that in humans is encoded by the AP4M1 gene.

<span class="mw-page-title-main">KIAA0196</span> Protein-coding gene in the species Homo sapiens

KIAA0196 is a human gene. The product is a protein that is a component of the WASH complex, which regulates actin assembly on intracellular vesicles. Mutations in KIAA0196 are implicated in some forms of hereditary spastic paraplegia.

<span class="mw-page-title-main">SPG11</span>

Spatacsin is a protein that in humans is encoded by the SPG11 gene.

<span class="mw-page-title-main">AP4E1</span>

AP-4 complex subunit epsilon-1 is a protein that in humans is encoded by the AP4E1 gene.

<span class="mw-page-title-main">AP4S1</span> Protein-coding gene in humans

AP-4 complex subunit sigma-1 is a protein that in humans is encoded by the AP4S1 gene.

Margaret Scott Robinson FRS FMedSci is a British molecular cell biologist, a professor and researcher in the Cambridge Institute for Medical Research, at the University of Cambridge.

<span class="mw-page-title-main">ZFYVE26</span>

Zinc finger, FYVE domain containing 26 is a protein that in humans is encoded by the ZFYVE26 gene.

<span class="mw-page-title-main">ZFYVE27</span>

Zinc finger, FYVE domain containing 27 is a protein that in humans is encoded by the ZFYVE27 gene.

Spastic paraplegia 15 (SPG15) is a form of hereditary spastic paraplegia that commonly becomes apparent during childhood or adolescence. The disease is caused by mutations within the ZFYVE26 gene - also known as the SPG15 gene - and is passed down in an autosomal recessive manner.

<span class="mw-page-title-main">AP5Z1</span> Protein-coding gene in the species Homo sapiens

AP-5 complex subunit zeta (AP5Z1) is a protein that in humans is encoded by the AP5Z1 gene.

<span class="mw-page-title-main">AP5B1</span> Protein-coding gene in the species Homo sapiens

AP-5 complex subunit beta (AP5B1) is a protein that in humans is encoded by the AP5B1 gene.

<span class="mw-page-title-main">AP5M1</span> Protein-coding gene in the species Homo sapiens

AP-5 complex subunit mu (AP5M1) is a protein that in humans is encoded by the AP5M1 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000125843 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000068264 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Hirst, Jennifer; Barlow, Lael D.; Francisco, Gabriel Casey; Sahlender, Daniela A.; Seaman, Matthew N. J.; Dacks, Joel B.; Robinson, Margaret S. (2011-10-11). "The fifth adaptor protein complex". PLOS Biology. 9 (10): e1001170. doi:10.1371/journal.pbio.1001170. ISSN   1545-7885. PMC   3191125 . PMID   22022230.
  6. Hirst, Jennifer; Irving, Carol; Borner, Georg H. H. (2012-11-21). "Adaptor protein complexes AP-4 and AP-5: new players in endosomal trafficking and progressive spastic paraplegia". Traffic (Copenhagen, Denmark). 14 (2): 153–164. doi:10.1111/tra.12028. ISSN   1600-0854. PMID   23167973. S2CID   13766991. Archived from the original on 2022-02-10. Retrieved 2022-07-09.
  7. Słabicki, Mikołaj; Theis, Mirko; Krastev, Dragomir B.; Samsonov, Sergey; Mundwiller, Emeline; Junqueira, Magno; Paszkowski-Rogacz, Maciej; Teyra, Joan; Heninger, Anne-Kristin; Poser, Ina; Prieur, Fabienne (2010-06-29). "A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia". PLOS Biology. 8 (6): e1000408. doi:10.1371/journal.pbio.1000408. ISSN   1545-7885. PMC   2893954 . PMID   20613862.
  8. Hirst, Jennifer; Madeo, Marianna; Smets, Katrien; Edgar, James R.; Schols, Ludger; Li, Jun; Yarrow, Anna; Deconinck, Tine; Baets, Jonathan; Van Aken, Elisabeth; De Bleecker, Jan (2016-08-25). "Complicated spastic paraplegia in patients with AP5Z1 mutations (SPG48)". Neurology. Genetics. 2 (5): e98. doi:10.1212/NXG.0000000000000098. ISSN   2376-7839. PMC   5001803 . PMID   27606357.
  9. Stevanin, Giovanni (1993), Adam, Margaret P.; Mirzaa, Ghayda M.; Pagon, Roberta A.; Wallace, Stephanie E. (eds.), "Spastic Paraplegia 11", GeneReviews®, Seattle (WA): University of Washington, Seattle, PMID   20301389, archived from the original on 2022-01-22, retrieved 2022-07-09
  10. Hanein, Sylvain; Martin, Elodie; Boukhris, Amir; Byrne, Paula; Goizet, Cyril; Hamri, Abdelmadjid; Benomar, Ali; Lossos, Alexander; Denora, Paola; Fernandez, José; Elleuch, Nizar (April 2008). "Identification of the SPG15 gene, encoding spastizin, as a frequent cause of complicated autosomal-recessive spastic paraplegia, including Kjellin syndrome". American Journal of Human Genetics. 82 (4): 992–1002. doi:10.1016/j.ajhg.2008.03.004. ISSN   1537-6605. PMC   2427184 . PMID   18394578.