C9orf78

C9orf78
Identifiers
Aliases	C9orf78 , HCA59, HSPC220, bA409K20.3, chromosome 9 open reading frame 78, CSU2, TLS1
External IDs	MGI: 2385132; HomoloGene: 9551; GeneCards: C9orf78; OMA:C9orf78 - orthologs
Gene location (Human) Chr. Chromosome 9 (human) [1] Band 9q34.11 Start 129,827,290 bp [1] End 129,835,863 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2|2 B Start 30,862,189 bp [2] End 30,872,213 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in monocyte Achilles tendon C1 segment gastrocnemius muscle anterior cingulate cortex tibial arteries Descending thoracic aorta gonad stromal cell of endometrium gastric mucosa Top expressed in neural layer of retina dentate gyrus of hippocampal formation granule cell cerebellum hypothalamus olfactory bulb tail of embryo cerebellar cortex granulocyte ovary superior frontal gyrus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding Cellular component nucleoplasm cytosol nucleus spliceosomal complex Biological process regulation of mRNA splicing, via spliceosome Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 51759 227707 Ensembl ENSG00000136819 ENSMUSG00000026851 UniProt Q9NZ63 Q3TQI7 RefSeq (mRNA) NM_016520 NM_144885 RefSeq (protein) NP_057604 NP_659134 Location (UCSC) Chr 9: 129.83 – 129.84 Mb Chr 2: 30.86 – 30.87 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Uncharacterized protein C9orf78 is a protein that in humans is encoded by the C9orf78 gene. ^{[5] [6] [7]}

References

1. GRCh38: Ensembl release 89: ENSG00000136819 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000026851 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Zhang QH, Ye M, Wu XY, Ren SX, Zhao M, Zhao CJ, Fu G, Shen Y, Fan HY, Lu G, Zhong M, Xu XR, Han ZG, Zhang JW, Tao J, Huang QH, Zhou J, Hu GX, Gu J, Chen SJ, Chen Z (Nov 2000). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC   310934 . PMID   11042152.
6. Wang Y, Han KJ, Pang XW, Vaughan HA, Qu W, Dong XY, Peng JR, Zhao HT, Rui JA, Leng XS, Cebon J, Burgess AW, Chen WF (Jul 2002). "Large scale identification of human hepatocellular carcinoma-associated antigens by autoantibodies". J Immunol. 169 (2): 1102–9. doi: 10.4049/jimmunol.169.2.1102 . PMID   12097419.
7. "Entrez Gene: C9orf78 chromosome 9 open reading frame 78".

External links

• Human C9orf78 genome location and C9orf78 gene details page in the UCSC Genome Browser .

Further reading

• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Humphray SJ, Oliver K, Hunt AR, et al. (2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369–74. Bibcode:2004Natur.429..369H. doi:10.1038/nature02465. PMC   2734081 . PMID   15164053.
• Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi: 10.1073/pnas.0404720101 . PMC   514446 . PMID   15302935.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Rush J, Moritz A, Lee KA, et al. (2005). "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells". Nat. Biotechnol. 23 (1): 94–101. doi:10.1038/nbt1046. PMID   15592455. S2CID   7200157.
• Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.