CCDC181

Last updated
CCDC181
Identifiers
Aliases CCDC181 , C1orf114, coiled-coil domain containing 181
External IDs MGI: 1922145 HomoloGene: 10912 GeneCards: CCDC181
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_029115

RefSeq (protein)

NP_001287897
NP_001287898
NP_067002

NP_083391

Location (UCSC) Chr 1: 169.39 – 169.46 Mb Chr 1: 164.1 – 164.12 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Coiled-coil domain-containing protein 181 (CCDC181) is a protein that in human is encoded by C1orf114, [5] which is located at the Chromosome 1 at 1q24.2. [5] The accession is Q5T1D7. [5] Researches have recently revealed that CCDC 181 is a microtubule-binding protein that interacts with murine Hook1 in haploid male germ cells and localizes to the sperm tail and motile cilia. [6] The disruption of Hook1 may lead to inappropriate function of spermatogenesis. The dysfunction may be related to the abnormal head shape of sperm or distinctive structural changes in flagella in sperm, which can result in male infertility. An increased rate of my gene has found in the haploid phase of male cell during meiosis, thus it is believed to relate to sperm cell and aid in spermatogenesis.

Expression

under expression of RhoGTP Expression of CCDC 181 in different condition.png
under expression of RhoGTP

It is discovered that a significant high expression of CCDC 181 found on human testis, which is a male reproductive gland. This is related to the study of its encoded protein-CCDC181, which relates to human infertility when in low expression. Also, high expression of protein is found in the olfactory area and cortical subplate. Researchers have studied the expression of CCDC 181 under different conditions. One of the outstanding findings is that under the coexistence of Rho GTP dissociation inhibitor, the expression of CCDC 181 is depressed. Rho GTP dissociation inhibitor has a phenomenal effect on bladder cancer cells, so studies have suggested that CCDC 181 might also be related to bladder cancer.

Homology

Orthologs have been found mainly in eukaryotes, including mammals, birds, reptiles, amphibians and fishes, with the highest identity on the mammalian species.

Genus

species

Common

name

Divergence

from

humans

(MYA)

NCBI

mRNA

accession

Sequence

identity

Sequence similarityLength

(aa)

Homo sapiensHumans--NM_001300968----508
Odobenus rosmarus divergensWalrus96XP_01242086086%93%507
Physeter catodon Sperm whale96XP_00710211284%91%509
Balaenoptera acutorostrata scammoniMinke whale96XP_00717254884%90%509
Ictidomys tridecemlineatus Thirteen-lined ground squirrel90XP_02157835481%90%507
Octodon degus Degu90XP_02356440880%89%537
Rousettus aegyptiacus Egyptian fruit bat96XP_01600409278%88%505
Pteropus vampyrus Large flying fox96XP_02339332978%89%522
Condylura cristata star-nosed mole96XP_00468852278%87%508
Mustela putorius furoFerret96XP_00475671569%78%459
Nestor notabilis Kea312XP_01001406656%72%498
Pelodiscus sinensis Chinese softshell turtle312XP_00611227555%73%512
Sorex araneus shrew96XP_01278933455%71%502
Chelonia mydas Green sea turtle312XP_00706169254%72%517
Xenopus tropicalis western clawed frog352XP_01281311642%61%471
Lonchura striata domestica society finch312XP_02140455740%61%488
Nanorana parkeri High Himalaya frog352XP_01842329136%56%334
Scleropages formosus Asian arowana435XP_01860355735%55%389
Hippocampus comes Tiger tail seahorse435XP_01973571229%44%439
  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000117477 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000026578 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. 1 2 3 "Homo sapiens coiled-coil domain containing 181 (CCDC181), transcript v - Nucleotide - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2018-05-01.
  6. Schwarz T, Prieler B, Schmid JA, Grzmil P, Neesen J (May 2017). "Ccdc181 is a microtubule-binding protein that interacts with Hook1 in haploid male germ cells and localizes to the sperm tail and motile cilia". European Journal of Cell Biology. 96 (3): 276–288. doi:10.1016/j.ejcb.2017.02.003. PMC   5496667 . PMID   28283191.

Related Research Articles

Spermatogenesis Production of sperm

Spermatogenesis is the process by which haploid spermatozoa develop from germ cells in the seminiferous tubules of the testis. This process starts with the mitotic division of the stem cells located close to the basement membrane of the tubules. These cells are called spermatogonial stem cells. The mitotic division of these produces two types of cells. Type A cells replenish the stem cells, and type B cells differentiate into primary spermatocytes. The primary spermatocyte divides meiotically into two secondary spermatocytes; each secondary spermatocyte divides into two equal haploid spermatids by Meiosis II. The spermatids are transformed into spermatozoa (sperm) by the process of spermiogenesis. These develop into mature spermatozoa, also known as sperm cells. Thus, the primary spermatocyte gives rise to two cells, the secondary spermatocytes, and the two secondary spermatocytes by their subdivision produce four spermatozoa and four haploid cells.

Spermatocyte Sperm precursor cell that undergoes meiosis

Spermatocytes are a type of male gametocyte in animals. They derive from immature germ cells called spermatogonia. They are found in the testis, in a structure known as the seminiferous tubules. There are two types of spermatocytes, primary and secondary spermatocytes. Primary and secondary spermatocytes are formed through the process of spermatocytogenesis.

Transforming protein RhoA Protein-coding gene in the species Homo sapiens

Transforming protein RhoA, also known as Ras homolog family member A (RhoA), is a small GTPase protein in the Rho family of GTPases that in humans is encoded by the RHOA gene. While the effects of RhoA activity are not all well known, it is primarily associated with cytoskeleton regulation, mostly actin stress fibers formation and actomyosin contractility. It acts upon several effectors. Among them, ROCK1 and DIAPH1 are the best described. RhoA, and the other Rho GTPases, are part of a larger family of related proteins known as the Ras superfamily, a family of proteins involved in the regulation and timing of cell division. RhoA is one of the oldest Rho GTPases, with homologues present in the genomes since 1.5 billion years. As a consequence, RhoA is somehow involved in many cellular processes which emerged throughout evolution. RhoA specifically is regarded as a prominent regulatory factor in other functions such as the regulation of cytoskeletal dynamics, transcription, cell cycle progression and cell transformation.

Tektins are cytoskeletal proteins found in cilia and flagella as structural components of outer doublet microtubules. They are also present in centrioles and basal bodies. They are polymeric in nature, and form filaments.

ARHGDIB Protein-coding gene in the species Homo sapiens

Rho GDP-dissociation inhibitor 2 is a protein that in humans is encoded by the ARHGDIB gene. Aliases of this gene include RhoGDI2, GDID4, Rho GDI 2, and others.

GDI2

Rab GDP dissociation inhibitor beta is a protein that in humans is encoded by the GDI2 gene.

Citron kinase

Citron Rho-interacting kinase is an enzyme that in humans is encoded by the CIT gene.

Sperm-associated antigen 1 Protein-coding gene in the species Homo sapiens

Sperm-associated antigen 1 is a protein that in humans is encoded by the SPAG1 gene.

Sperm-associated antigen 8 Protein-coding gene in the species Homo sapiens

Sperm-associated antigen 8 is a protein that in humans is encoded by the SPAG8 gene.

SPEF2

Sperm flagellar protein 2 is a protein that in humans is encoded by the SPEF2 gene.

IFT20

Intraflagellar transport protein 20 homolog is a protein that in humans is encoded by the IFT20 gene. The gene is composed of 6 exons and is located on human chromosome 17p11.1. This gene is expressed in human brain, lung, kidney and pancreas, and lower expression were also detected in human placenta, liver, thymus, prostate and testis.

MDia1

mDia1 is a member of the protein family called the formins and is a Rho effector. It is the mouse version of the diaphanous homolog 1 of Drosophila. mDia1 localizes to cells' mitotic spindle and midbody, plays a role in stress fiber and filopodia formation, phagocytosis, activation of serum response factor, formation of adherens junctions, and it can act as a transcription factor. mDia1 accelerates actin nucleation and elongation by interacting with barbed ends of actin filaments. The gene encoding mDia1 is located on Chromosome 18 of Mus musculus and named Diap1.

Ccdc109b Protein-coding gene in the species Homo sapiens

Coiled-coil domain containing 109B (CCDC109B) is a potential calcium uniporter protein found in the membrane of human cells and is encoded by the CCDC109B gene. While CCDC109B is a transmembrane protein it is unclear if it is located within the cell membrane or mitochondrial membrane.

TAF7l Protein

TATA-box binding protein associated factor 7-like also known as CT40 is a protein that in humans is encoded by the TAF7l gene. It is a close homologue to the TAF7 gene, although its function may be different. Currently, little is known about this gene. It was originally demonstrated to be a testis-specific gene based on RT-PCR experiments on tissue extracts, however, it has now been found in white and brown adipose tissue, as well as in certain types of cancer.

CFAP299 Protein-coding gene in the species Homo sapiens

Cilia- and flagella-associated protein 299 (CFAP299), is a protein that in humans is encoded by the CFAP299 gene. CFAP299 is predicted to play a role in spermatogenesis and cell apoptosis.

CCDC198 Mammalian protein found in Homo sapiens

Coiled-Coil Domain Containing 198 (CCDC198) is a gene that encodes for a protein of the same name.

Spermatogenesis-associated protein 16 is a mammalian protein encoded by the SPATA16 gene. SPATA16, also known as NYD-SP12, is a developmental protein that aids in differentiation of germ cells for spermatogenesis and participates in acrosome formation for appropriate sperm-egg fusion. SPATA16 is located on chromosome 3 at position 26.31 and is a member of the tetratricopeptide repeat-like superfamily, which facilitate interactions and assemblies between proteins and protein complexes.

CCDC121 Protein-coding gene in the species Homo sapiens

Coiled-coil domain containing 121 (CCDC121) is a protein encoded by the CCDC121 gene in humans. CCDC121 is located on the minus strand of chromosome 2 and encodes three protein isoforms. All isoforms of CCDC121 contain a domain of unknown function referred to as DUF4515 or pfam14988.

CCDC190 Protein-coding gene in the species Homo sapiens

Coiled-Coil Domain Containing 190, also known as C1orf110, the Chromosome 1 Open Reading Frame 110, MGC48998 and CCDC190, is found to be a protein coding gene widely expressed in vertebrates. RNA-seq gene expression profile shows that this gene selectively expressed in different organs of human body like lung brain and heart. The expression product of c1orf110 is often called Coiled-coil domain-containing protein 190 with a size of 302 aa. It may get the name because a coiled-coil domain is found from position 14 to 72. At least 6 spliced variants of its mRNA and 3 isoforms of this protein can be identified, which is caused by alternative splicing in human.

CCDC188 Gene

CCDC188 or coiled-coil domain containing protein is a protein that in humans is encoded by the CCDC188 gene.