CHD9

CHD9
Identifiers
Aliases	CHD9 , AD013, CReMM, KISH2, PRIC320, CHD-9, chromodomain helicase DNA binding protein 9
External IDs	OMIM: 616936; MGI: 1924001; HomoloGene: 11844; GeneCards: CHD9; OMA:CHD9 - orthologs
Gene location (Human) Chr. Chromosome 16 (human) [1] Band 16q12.2 Start 53,054,991 bp [1] End 53,329,150 bp [1]
Gene location (Mouse) Chr. Chromosome 8 (mouse) [2] Band 8|8 C4 Start 91,554,980 bp [2] End 91,781,144 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in Achilles tendon tibia mucosa of paranasal sinus tendon of biceps brachii skin of hip visceral pleura renal medulla urethra pylorus corpus callosum Top expressed in right kidney esophagus lip hand aortic valve zygote ascending aorta otolith organ utricle secondary oocyte More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding nucleotide binding hydrolase activity, acting on acid anhydrides protein binding ATP binding hydrolase activity helicase activity Cellular component nucleoplasm nucleus cytoplasm Biological process regulation of transcription, DNA-templated transcription, DNA-templated regulation of lipid metabolic process chromatin organization Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 80205 109151 Ensembl ENSG00000177200 ENSMUSG00000056608 UniProt Q3L8U1 Q8BYH8 RefSeq (mRNA) NM_001308319 NM_015287 NM_025134 NM_001352127 NM_001352156 NM_001352157 NM_001352158 NM_001382353 NM_001382354 NM_001382355 NM_177224 NM_001310530 RefSeq (protein) NP_001295248 NP_079410 NP_001339056 NP_001339085 NP_001339086 NP_001339087 NP_001369282 NP_001369283 NP_001369284 NP_001297459 NP_796198 Location (UCSC) Chr 16: 53.05 – 53.33 Mb Chr 8: 91.55 – 91.78 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Chromodomain-helicase-DNA-binding protein 9 is an enzyme that in humans is encoded by the CHD9 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000177200 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000056608 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Nagase T, Ishikawa K, Nakajima D, Ohira M, Seki N, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Apr 1997). "Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro" (PDF). DNA Research. 4 (2): 141–50. doi: 10.1093/dnares/4.2.141 . PMID   9205841.
6. "Entrez Gene: CHD9 chromodomain helicase DNA binding protein 9".

External links

• Human CHD9 genome location and CHD9 gene details page in the UCSC Genome Browser .

Further reading

• Bonaldo MF, Lennon G, Soares MB (Sep 1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Hu RM, Han ZG, Song HD, Peng YD, Huang QH, Ren SX, Gu YJ, Huang CH, Li YB, Jiang CL, Fu G, Zhang QH, Gu BW, Dai M, Mao YF, Gao GF, Rong R, Ye M, Zhou J, Xu SH, Gu J, Shi JX, Jin WR, Zhang CK, Wu TM, Huang GY, Chen Z, Chen MD, Chen JL (Aug 2000). "Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning". Proceedings of the National Academy of Sciences of the United States of America. 97 (17): 9543–8. Bibcode:2000PNAS...97.9543H. doi: 10.1073/pnas.160270997 . PMC   16901 . PMID   10931946.
• Shur I, Benayahu D (Sep 2005). "Characterization and functional analysis of CReMM, a novel chromodomain helicase DNA-binding protein". Journal of Molecular Biology. 352 (3): 646–55. doi:10.1016/j.jmb.2005.06.049. PMID   16095617.
• Marom R, Shur I, Hager GL, Benayahu D (Jun 2006). "Expression and regulation of CReMM, a chromodomain helicase-DNA-binding (CHD), in marrow stroma derived osteoprogenitors". Journal of Cellular Physiology. 207 (3): 628–35. doi:10.1002/jcp.20611. PMID   16523501. S2CID   21524910.
• Surapureddi S, Viswakarma N, Yu S, Guo D, Rao MS, Reddy JK (May 2006). "PRIC320, a transcription coactivator, isolated from peroxisome proliferator-binding protein complex". Biochemical and Biophysical Research Communications. 343 (2): 535–43. doi:10.1016/j.bbrc.2006.02.160. PMID   16554032.
• Shur I, Solomon R, Benayahu D (May 2006). "Dynamic interactions of chromatin-related mesenchymal modulator, a chromodomain helicase-DNA-binding protein, with promoters in osteoprogenitors". Stem Cells. 24 (5): 1288–93. doi: 10.1634/stemcells.2005-0300 . PMID   16705189. S2CID   24621014.
• Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (Nov 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.