CLEC4A

Last updated
CLEC4A
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases CLEC4A , CLECSF6, DCIR, DDB27, LLIR, CD367, HDCGC13P, C-type lectin domain family 4 member A, hDCIR
External IDs OMIM: 605306 MGI: 1349412 HomoloGene: 49291 GeneCards: CLEC4A
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_016184
NM_194447
NM_194448
NM_194450

NM_001170332
NM_001170333
NM_011999

RefSeq (protein)

NP_057268
NP_919429
NP_919430
NP_919432

NP_001163803
NP_001163804
NP_036129

Location (UCSC) Chr 12: 8.12 – 8.14 Mb Chr 6: 123.08 – 123.12 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

C-type lectin domain family 4 member A is a protein that in humans is encoded by the CLEC4A gene. [5] [6]

Contents

This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. Members of this family share a common protein fold and have diverse functions, such as cell adhesion, cell-cell signalling, glycoprotein turnover, and roles in inflammation and immune response. The encoded type 2 transmembrane protein may play a role in inflammatory and immune response.

Multiple transcript variants encoding distinct isoforms have been identified for this gene. This gene is closely linked to other CTL/CTLD superfamily members on chromosome 12p13 in the natural killer gene complex region. [6]

Related Research Articles

Pattern recognition receptors (PRRs) play a crucial role in the proper function of the innate immune system. PRRs are germline-encoded host sensors, which detect molecules typical for the pathogens. They are proteins expressed mainly by cells of the innate immune system, such as dendritic cells, macrophages, monocytes, neutrophils, as well as by epithelial cells, to identify two classes of molecules: pathogen-associated molecular patterns (PAMPs), which are associated with microbial pathogens, and damage-associated molecular patterns (DAMPs), which are associated with components of host's cells that are released during cell damage or death. They are also called primitive pattern recognition receptors because they evolved before other parts of the immune system, particularly before adaptive immunity. PRRs also mediate the initiation of antigen-specific adaptive immune response and release of inflammatory cytokines.

<span class="mw-page-title-main">CLEC7A</span> Protein-coding gene in humans

C-type lectin domain family 7 member A or Dectin-1 is a protein that in humans is encoded by the CLEC7A gene. CLEC7A is a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. The encoded glycoprotein is a small type II membrane receptor with an extracellular C-type lectin-like domain fold and a cytoplasmic domain with a partial immunoreceptor tyrosine-based activation motif. It functions as a pattern-recognition receptor for a variety of β-1,3-linked and β-1,6-linked glucans from fungi and plants, and in this way plays a role in innate immune response. Expression is found on myeloid dendritic cells, monocytes, macrophages and B cells. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. This gene is closely linked to other CTL/CTLD superfamily members on chromosome 12p13 in the natural killer gene complex region.

<span class="mw-page-title-main">KLRC4</span> Protein-coding gene in the species Homo sapiens

NKG2-F type II integral membrane protein is a protein that in humans is encoded by the KLRC4 gene.

<span class="mw-page-title-main">LILRB4</span> Protein-coding gene in the species Homo sapiens

Leukocyte immunoglobulin-like receptor subfamily B member 4 is a protein that in humans is encoded by the LILRB4 gene.

<span class="mw-page-title-main">CLEC11A</span> Protein-coding gene in the species Homo sapiens

C-type lectin domain family 11 member A is a protein that in humans is encoded by the CLEC11A gene.

<span class="mw-page-title-main">HCST (gene)</span> Protein-coding gene in the species Homo sapiens

Hematopoietic cell signal transducer is a protein that in humans is encoded by the HCST gene.

<span class="mw-page-title-main">LILRB3</span> Protein-coding gene in the species Homo sapiens

Leukocyte immunoglobulin-like receptor subfamily B member 3 is a protein that in humans is encoded by the LILRB3 gene.

<span class="mw-page-title-main">SIGLEC9</span> Protein-coding gene in the species Homo sapiens

Sialic acid-binding Ig-like lectin 9 is a protein that in humans is encoded by the SIGLEC9 gene.

<span class="mw-page-title-main">SIRPB1</span> Protein-coding gene in the species Homo sapiens

Signal-regulatory protein beta-1 is a protein that in humans is encoded by the SIRPB1 gene. SIRPB1 has also recently been designated CD172B.

<span class="mw-page-title-main">LILRA2</span> Protein-coding gene in the species Homo sapiens

Leukocyte immunoglobulin-like receptor subfamily A member 2 is a protein that in humans is encoded by the LILRA2 gene.

<span class="mw-page-title-main">CLEC2D</span> Protein-coding gene in humans

C-type lectin domain family 2 member D is a protein that in humans is encoded by the CLEC2D gene.

<span class="mw-page-title-main">PILRB</span> Protein-coding gene in the species Homo sapiens

Paired immunoglobulin-like type 2 receptor beta is a protein that in humans is encoded by the PILRB gene.

<span class="mw-page-title-main">CLEC1A</span> Protein-coding gene in humans

C-type lectin domain family 1 member A is a protein that in humans is encoded by the CLEC1A gene.

<span class="mw-page-title-main">SIGLEC10</span> Protein-coding gene in the species Homo sapiens

Sialic acid-binding Ig-like lectin 10 is a protein that in humans is encoded by the SIGLEC10 gene. Siglec-G is often referred to as the murine paralog of human Siglec-10

<span class="mw-page-title-main">CLEC2B</span> Protein-coding gene in humans

C-type lectin domain family 2 member B is a protein that in humans is encoded by the CLEC2B gene.

<span class="mw-page-title-main">CD300A</span> Human gene

CD300A is a human gene.

<span class="mw-page-title-main">CLEC12A</span> Protein-coding gene in humans

C-type lectin domain family 12 member A is a protein that in humans is encoded by the CLEC12A gene.

<span class="mw-page-title-main">LILRB5</span> Protein-coding gene in the species Homo sapiens

Leukocyte immunoglobulin-like receptor subfamily B member 5 is a protein that in humans is encoded by the LILRB5 gene.

<span class="mw-page-title-main">PILRA</span> Protein-coding gene in the species Homo sapiens

Paired immunoglobin like type 2 receptor alpha is a protein that in humans is encoded by the PILRA gene.

<span class="mw-page-title-main">CLEC6A</span> Protein-coding gene in humans

Dectin-2 or C-type lectin domain containing 6A is a protein that in humans is encoded by the CLEC6A gene. Dectin-2 is a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. The encoded protein is a type II transmembrane protein with an extracellular carbohydrate recognition domain. It functions as a pattern recognition receptor recognizing α-mannans and as such plays an important role in innate immune response to fungi. Expression is found on macrophages and dendritic cells. It can also be found at low levels in Langerhans cells and peripheral blood monocytes, where expression levels could be increased upon induction of inflammation.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000111729 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000030148 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Bates EE, Fournier N, Garcia E, Valladeau J, Durand I, Pin JJ, Zurawski SM, Patel S, Abrams JS, Lebecque S, Garrone P, Saeland S (Sep 1999). "APCs express DCIR, a novel C-type lectin surface receptor containing an immunoreceptor tyrosine-based inhibitory motif". J Immunol. 163 (4): 1973–83. doi:10.4049/jimmunol.163.4.1973. PMID   10438934.
  6. 1 2 "Entrez Gene: CLEC4A C-type lectin domain family 4, member A".

Further reading