CNOT6

Last updated
CNOT6
Identifiers
Aliases CNOT6 , CCR4, Ccr4a, CCR4-NOT transcription complex subunit 6
External IDs OMIM: 608951 MGI: 2144529 HomoloGene: 69187 GeneCards: CNOT6
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001303241
NM_015455
NM_001370472
NM_001370473
NM_001370474

Contents

NM_001290741
NM_212484
NM_001363356
NM_001363357

RefSeq (protein)

NP_001290170
NP_001357401
NP_001357402
NP_001357403

NP_001277670
NP_997649
NP_001350285
NP_001350286

Location (UCSC) Chr 5: 180.49 – 180.58 Mb Chr 11: 49.67 – 49.71 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

CCR4-NOT transcription complex subunit 6 is a protein that in humans is encoded by the CNOT6 gene. [5] [6]

The protein encoded by this gene is a subunit of the CCR4-Not transcriptional regulation and deadenylase complex. The encoded protein has a 3'-5' exonuclease activity and prefers polyadenylated substates. [6]

Related Research Articles

Exonuclease

Exonucleases are enzymes that work by cleaving nucleotides one at a time from the end (exo) of a polynucleotide chain. A hydrolyzing reaction that breaks phosphodiester bonds at either the 3′ or the 5′ end occurs. Its close relative is the endonuclease, which cleaves phosphodiester bonds in the middle (endo) of a polynucleotide chain. Eukaryotes and prokaryotes have three types of exonucleases involved in the normal turnover of mRNA: 5′ to 3′ exonuclease (Xrn1), which is a dependent decapping protein; 3′ to 5′ exonuclease, an independent protein; and poly(A)-specific 3′ to 5′ exonuclease.

ELOA

Elongin A is a protein that in humans is encoded by the ELOA gene.

TREX2

Three prime repair exonuclease 2 is an enzyme that in humans is encoded by the TREX2 gene.

CNOT7

CCR4-NOT transcription complex subunit 7 is a protein that in humans is encoded by the CNOT7 gene. It is a subunit of the CCR4-Not deadenylase complex.

ATP1A4

Sodium/potassium-transporting ATPase subunit alpha-4 is an enzyme that in humans is encoded by the ATP1A4 gene.

CNOT8

CCR4-NOT transcription complex subunit 8 is a protein that in humans is encoded by the CNOT8 gene. It is a subunit of the CCR4-Not deadenylase complex.

CACNB3

Voltage-dependent L-type calcium channel subunit beta-3 is a protein that in humans is encoded by the CACNB3 gene.

ANAPC7

Anaphase-promoting complex subunit 7 is an enzyme that in humans is encoded by the ANAPC7 gene. Multiple transcript variants encoding different isoforms have been found for this gene.

40S ribosomal protein S11

40S ribosomal protein S11 is a protein that in humans is encoded by the RPS11 gene.

40S ribosomal protein S28

40S ribosomal protein S28 is a protein that in humans is encoded by the RPS28 gene.

CNOT2

CCR4-NOT transcription complex subunit 2 is a protein that in humans is encoded by the CNOT2 gene. It is a subunit of the CCR4-Not deadenylase complex.

CNOT1

CCR4-NOT transcription complex subunit 1 is a protein that in humans is encoded by the CNOT1 gene.

CNOT3

CCR4-NOT transcription complex subunit 3 is a protein that in humans is encoded by the CNOT3 gene. It is a subunit of the CCR4-Not deadenylase complex.

MRPL17

39S ribosomal protein L17, mitochondrial is a protein that in humans is encoded by the MRPL17 gene.

CNOT4

CCR4-NOT transcription complex, subunit 4 is a protein that in humans is encoded by the CNOT4 gene.

CNOT10

CCR4-NOT transcription complex subunit 10 is a protein that in humans is encoded by the CNOT10 gene. It is a subunit of the CCR4-Not deadenylase complex.

CNOT9

CCR4-NOT transcription complex subunit 9 is a protein that in humans is encoded by the CNOT9 gene.

CNOT11

CCR4-NOT transcription complex subunit 11 is a protein that in humans is encoded by the CNOT11 gene. It is a subunit of the CCR4-Not deadenylase complex.

CNOT6L

CCR4-NOT transcription complex subunit 6 like is a protein that in humans is encoded by the CNOT6L gene. It is a paralog of CNOT6 and therefore a potential subunit of the CCR4-Not deadenylase complex.

CCR4-Not Multiprotein complex used in gene expression

Carbon Catabolite Repression—Negative On TATA-less, or CCR4-Not, is a multiprotein complex that functions in gene expression. The complex has multiple enzymatic activities as both a poly(A) 3′-5′ exonuclease and a ubiquitin ligase. The complex is present both in the nucleus where it regulates transcription and in the cytoplasm where it associates with translating ribosomes and RNA processing bodies.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000113300 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000020362 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Chen J, Chiang YC, Denis CL (Mar 2002). "CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase". EMBO J. 21 (6): 1414–26. doi:10.1093/emboj/21.6.1414. PMC   125924 . PMID   11889047.
  6. 1 2 "Entrez Gene: CNOT6 CCR4-NOT transcription complex, subunit 6".

Further reading